BLASTX nr result

ID: Glycyrrhiza23_contig00015286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015286
         (960 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534111.1| PREDICTED: probable cyclic nucleotide-gated ...   461   e-127
ref|XP_003534112.1| PREDICTED: probable cyclic nucleotide-gated ...   458   e-126
ref|XP_003548315.1| PREDICTED: probable cyclic nucleotide-gated ...   455   e-126
ref|XP_003548317.1| PREDICTED: probable cyclic nucleotide-gated ...   455   e-126
ref|XP_003610842.1| Cyclic nucleotide gated channel [Medicago tr...   455   e-126

>ref|XP_003534111.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
            chloroplastic-like [Glycine max]
          Length = 770

 Score =  461 bits (1185), Expect = e-127
 Identities = 236/325 (72%), Positives = 253/325 (77%), Gaps = 5/325 (1%)
 Frame = +1

Query: 1    SCWYLFGLQRVNQCLRDACHRSNLTSCMELIDCDL-----KSSNWSNNTGAIACWNSPSG 165
            S WYLFGLQRVNQCLR AC  SN+T C   IDC       +S  W+ N  A AC +S SG
Sbjct: 385  SGWYLFGLQRVNQCLRKACQHSNITGCSAFIDCGSDRASDQSELWNKNVNATACLDSSSG 444

Query: 166  AFPYGIYAYAVPLTIETNAVNKYVFALFWGFQQISTLAGNQTPSYFVWEVLFTMXXXXXX 345
            AFPYGIY +AVPLTIET  V KYVFALFWGFQQISTLAGNQTPSYF WEVLFTM      
Sbjct: 445  AFPYGIYVHAVPLTIETRVVKKYVFALFWGFQQISTLAGNQTPSYFEWEVLFTMAIIGLG 504

Query: 346  XXXXXXXXXNIQNFLQGLGRRRQEMQLRGRDSEQWMSHXXXXXXXXXXXXQAERYNWAAT 525
                     NIQNFLQ LGRRR EMQLRGRD EQWMSH            QAERY+WAAT
Sbjct: 505  LLLFALLIGNIQNFLQALGRRRLEMQLRGRDVEQWMSHRRLPEDLRRRVRQAERYSWAAT 564

Query: 526  RGVSEETVLENLPEDLQTDIRRHLFKFVKKVRIFALMDEPILDAIRERLKQKTYIKGSRI 705
            RGV+EE +LENLPEDLQTDIRRHLFKFVKKVRIF+LMDEPILDAI ERLKQKTYIKGS++
Sbjct: 565  RGVNEEILLENLPEDLQTDIRRHLFKFVKKVRIFSLMDEPILDAICERLKQKTYIKGSKV 624

Query: 706  LRQGGLVEKMVFVVRGKLESIGEDGIPLSLSEGDACGEELLTRFLEHSSGSKDGKRVRPQ 885
            L QGGLVEKMVFVVRGKLES G+DG  + LSEGDACGEELLT +LEHSS S DGK++R Q
Sbjct: 625  LSQGGLVEKMVFVVRGKLESFGDDGTIVPLSEGDACGEELLTWYLEHSSVSTDGKKLRVQ 684

Query: 886  IQRLLSNRTVRCLTNVEAFSLRAAD 960
             QR LSNRT+RCLTNVEAFSL AAD
Sbjct: 685  GQRFLSNRTIRCLTNVEAFSLHAAD 709


>ref|XP_003534112.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
            chloroplastic-like [Glycine max]
          Length = 766

 Score =  458 bits (1178), Expect = e-126
 Identities = 231/329 (70%), Positives = 255/329 (77%), Gaps = 9/329 (2%)
 Frame = +1

Query: 1    SCWYLFGLQRVNQCLRDACHRSNLTSCMELIDC---------DLKSSNWSNNTGAIACWN 153
            SCWYLFGLQRVNQCLRDACH SN+  CM+ IDC          L+S  W NNT A+AC +
Sbjct: 382  SCWYLFGLQRVNQCLRDACHSSNIPGCMKFIDCGRGHGKNQPSLRSDQWINNTDAVACLD 441

Query: 154  SPSGAFPYGIYAYAVPLTIETNAVNKYVFALFWGFQQISTLAGNQTPSYFVWEVLFTMXX 333
                 F YGIY  AVPLTIETN VNKYV++LFWGFQQISTLAGN  PSYFVWEVLFTM  
Sbjct: 442  PSPDGFSYGIYENAVPLTIETNIVNKYVYSLFWGFQQISTLAGNLEPSYFVWEVLFTMAI 501

Query: 334  XXXXXXXXXXXXXNIQNFLQGLGRRRQEMQLRGRDSEQWMSHXXXXXXXXXXXXQAERYN 513
                         NIQNFLQ LGRR+ EMQLRGRD EQWMSH            QAERYN
Sbjct: 502  IGMGLLLFAILIGNIQNFLQALGRRKLEMQLRGRDVEQWMSHRRLPEDLRRRVRQAERYN 561

Query: 514  WAATRGVSEETVLENLPEDLQTDIRRHLFKFVKKVRIFALMDEPILDAIRERLKQKTYIK 693
            WAATRGV+EE ++ENLPEDLQ DIRRHLFKFVKK+R+FALMDEPILDAI +RL+QKTYIK
Sbjct: 562  WAATRGVNEEMLMENLPEDLQRDIRRHLFKFVKKIRLFALMDEPILDAICDRLRQKTYIK 621

Query: 694  GSRILRQGGLVEKMVFVVRGKLESIGEDGIPLSLSEGDACGEELLTRFLEHSSGSKDGKR 873
            GS+IL QGGLVEKMVFVVRGKLESIGEDG  + LSEGD+CGEELLT +LEHSS S DG++
Sbjct: 622  GSKILSQGGLVEKMVFVVRGKLESIGEDGTRIPLSEGDSCGEELLTWYLEHSSVSTDGRK 681

Query: 874  VRPQIQRLLSNRTVRCLTNVEAFSLRAAD 960
            VR   QRL+SNRTVRCLTNVE+FSL A+D
Sbjct: 682  VRLPGQRLVSNRTVRCLTNVESFSLSASD 710


>ref|XP_003548315.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
            chloroplastic-like [Glycine max]
          Length = 772

 Score =  455 bits (1171), Expect = e-126
 Identities = 236/327 (72%), Positives = 252/327 (77%), Gaps = 7/327 (2%)
 Frame = +1

Query: 1    SCWYLFGLQRVNQCLRDACHRSNLTSCMELIDCDLKSSN-------WSNNTGAIACWNSP 159
            S WYLFGLQRVNQCLR+AC  SN+T C   IDC   + +       W+NN  A AC NS 
Sbjct: 385  SGWYLFGLQRVNQCLRNACRDSNITGCSAFIDCGYGADDVSGRAEVWNNNVNATACLNSS 444

Query: 160  SGAFPYGIYAYAVPLTIETNAVNKYVFALFWGFQQISTLAGNQTPSYFVWEVLFTMXXXX 339
            S AF YGIY  AVPLTIET  V+KYVFALFWGFQQISTLAGNQTPSYFVWEVLFTM    
Sbjct: 445  SDAFKYGIYVNAVPLTIETRVVHKYVFALFWGFQQISTLAGNQTPSYFVWEVLFTMAIIG 504

Query: 340  XXXXXXXXXXXNIQNFLQGLGRRRQEMQLRGRDSEQWMSHXXXXXXXXXXXXQAERYNWA 519
                       NIQNFLQ LGRRR EMQLRGRD EQWMSH             AERY+WA
Sbjct: 505  LGLLLFALLIGNIQNFLQALGRRRLEMQLRGRDVEQWMSHRRLPEDLRRRVRHAERYSWA 564

Query: 520  ATRGVSEETVLENLPEDLQTDIRRHLFKFVKKVRIFALMDEPILDAIRERLKQKTYIKGS 699
            ATRGV+EE +LEN+ EDLQTDIRRHLFKFVKKVRIFALMDEPILDAI ERLKQKTYIKGS
Sbjct: 565  ATRGVNEEILLENMQEDLQTDIRRHLFKFVKKVRIFALMDEPILDAICERLKQKTYIKGS 624

Query: 700  RILRQGGLVEKMVFVVRGKLESIGEDGIPLSLSEGDACGEELLTRFLEHSSGSKDGKRVR 879
            ++L QG LVEKMVFVVRG LES G+DG  + LSEGDACGEELLT +LEHSS S DGK+VR
Sbjct: 625  KVLSQGSLVEKMVFVVRGTLESFGDDGTMVPLSEGDACGEELLTWYLEHSSVSTDGKKVR 684

Query: 880  PQIQRLLSNRTVRCLTNVEAFSLRAAD 960
             Q QRLLSNRTVRCLTNVEAFSLRAAD
Sbjct: 685  VQGQRLLSNRTVRCLTNVEAFSLRAAD 711


>ref|XP_003548317.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
            chloroplastic-like [Glycine max]
          Length = 766

 Score =  455 bits (1170), Expect = e-126
 Identities = 230/329 (69%), Positives = 254/329 (77%), Gaps = 9/329 (2%)
 Frame = +1

Query: 1    SCWYLFGLQRVNQCLRDACHRSNLTSCMELIDCD---------LKSSNWSNNTGAIACWN 153
            SCWYLFGLQRVNQCLRDACH SN+  CM+ IDC          L+S  W NNT A+AC +
Sbjct: 382  SCWYLFGLQRVNQCLRDACHSSNIPECMKFIDCGRGHGNNQPGLRSDQWINNTQAVACLD 441

Query: 154  SPSGAFPYGIYAYAVPLTIETNAVNKYVFALFWGFQQISTLAGNQTPSYFVWEVLFTMXX 333
                 F YGIY  AVPLTIETN V KYV++LFWGFQQISTLAGN  PSYFVWEVLFTM  
Sbjct: 442  PSPDGFSYGIYENAVPLTIETNVVKKYVYSLFWGFQQISTLAGNLEPSYFVWEVLFTMAI 501

Query: 334  XXXXXXXXXXXXXNIQNFLQGLGRRRQEMQLRGRDSEQWMSHXXXXXXXXXXXXQAERYN 513
                         NIQNFLQ LGRR+ EMQLRGRD EQWMSH            +AERYN
Sbjct: 502  IGMGLLLFAILIGNIQNFLQALGRRKLEMQLRGRDVEQWMSHRRLPEDLRRRVRRAERYN 561

Query: 514  WAATRGVSEETVLENLPEDLQTDIRRHLFKFVKKVRIFALMDEPILDAIRERLKQKTYIK 693
            WAATRGV+EE ++ENLPEDLQ DIRRHLFKFVKK+R+FALMDEPILDAI ERL+QKTYIK
Sbjct: 562  WAATRGVNEEMLMENLPEDLQRDIRRHLFKFVKKIRLFALMDEPILDAICERLRQKTYIK 621

Query: 694  GSRILRQGGLVEKMVFVVRGKLESIGEDGIPLSLSEGDACGEELLTRFLEHSSGSKDGKR 873
            GS+IL QGGLVEKMVFVVRGKLESIGEDG  + LSEGD+CGEELLT +LEHSS S DG++
Sbjct: 622  GSKILSQGGLVEKMVFVVRGKLESIGEDGTRIPLSEGDSCGEELLTWYLEHSSVSTDGRK 681

Query: 874  VRPQIQRLLSNRTVRCLTNVEAFSLRAAD 960
            VR   QRL+SNRTVRCLTNVE+FSL A+D
Sbjct: 682  VRLPGQRLVSNRTVRCLTNVESFSLSASD 710


>ref|XP_003610842.1| Cyclic nucleotide gated channel [Medicago truncatula]
            gi|355512177|gb|AES93800.1| Cyclic nucleotide gated
            channel [Medicago truncatula]
          Length = 742

 Score =  455 bits (1170), Expect = e-126
 Identities = 233/322 (72%), Positives = 253/322 (78%), Gaps = 2/322 (0%)
 Frame = +1

Query: 1    SCWYLFGLQRVNQCLRDACHRSNLTSCMELIDCDLKSSNWSNNTGAIACWNSPSGAFPYG 180
            SCWYLFGLQRVNQCLRDAC  +NLT CMELIDC+  ++ W N+ GA  C NS SG F YG
Sbjct: 360  SCWYLFGLQRVNQCLRDACRNANLTGCMELIDCN-SNATWRNDKGANDCLNSSSGVFSYG 418

Query: 181  IYAYAVPLTIETNAVNKYVFALFWGFQQISTLAGNQTPSYFVWEVLFTMXXXXXXXXXXX 360
            IYA AVPLTIET  ++KYV+ALFWGFQQIST+AGNQ PSYFVWEVLFTM           
Sbjct: 419  IYANAVPLTIETRVISKYVYALFWGFQQISTMAGNQVPSYFVWEVLFTMSIIGLGLLLYA 478

Query: 361  XXXXNIQNFLQGLGRRRQEMQLRGRDSEQWMSHXXXXXXXXXXXXQAERYNWAATRGVSE 540
                NIQNFLQ LGRRR EMQLRGRD EQWMSH            +AERY WAATRGV E
Sbjct: 479  LLIGNIQNFLQALGRRRVEMQLRGRDVEQWMSHRRLPEDLKRRVREAERYTWAATRGVPE 538

Query: 541  ETVLENLPEDLQTDIRRHLFKFVKKVRIFALM--DEPILDAIRERLKQKTYIKGSRILRQ 714
            E  LENLPEDLQ DIRRHLFKFVKKVRIF++M  DEPILDAIRERL Q TYIKGSRIL Q
Sbjct: 539  EMALENLPEDLQKDIRRHLFKFVKKVRIFSMMDEDEPILDAIRERLIQTTYIKGSRILSQ 598

Query: 715  GGLVEKMVFVVRGKLESIGEDGIPLSLSEGDACGEELLTRFLEHSSGSKDGKRVRPQIQR 894
            GGLV+KMVF+VRGKLESIGEDGIP+ LSEGDACGEELL  +LE S  SK+GK+V+ Q Q 
Sbjct: 599  GGLVQKMVFIVRGKLESIGEDGIPVPLSEGDACGEELLRWYLEQSVESKEGKKVKLQGQG 658

Query: 895  LLSNRTVRCLTNVEAFSLRAAD 960
            L S+RTVRCLTNVEAFSLRA D
Sbjct: 659  LTSDRTVRCLTNVEAFSLRAKD 680


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