BLASTX nr result

ID: Glycyrrhiza23_contig00015272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015272
         (683 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520438.1| PREDICTED: putative UPF0481 protein At3g0264...   300   1e-79
ref|XP_003529045.1| PREDICTED: UPF0481 protein At3g47200-like [G...   300   2e-79
gb|ACU17730.1| unknown [Glycine max]                                  300   2e-79
ref|XP_003520436.1| PREDICTED: UPF0481 protein At3g47200-like [G...   278   6e-73
gb|AFK44374.1| unknown [Lotus japonicus]                              238   6e-61

>ref|XP_003520438.1| PREDICTED: putative UPF0481 protein At3g02645-like [Glycine max]
          Length = 247

 Score =  300 bits (769), Expect = 1e-79
 Identities = 141/188 (75%), Positives = 155/188 (82%)
 Frame = +3

Query: 3   GVSFERVQGRSFLDIRFKSTPILSWFLCLGCLRFTRCLKVRLQIPQLKVDQVTECVLRNL 182
           GVSFE+VQGRS+LDI+F+ TPILSWFLC GCL F++  K RLQIP LKVDQVTECVLRNL
Sbjct: 59  GVSFEKVQGRSYLDIKFEKTPILSWFLCFGCLPFSKWFKARLQIPHLKVDQVTECVLRNL 118

Query: 183 IALEQCHYSDQPFVCNYVSLIDSLIHTQEDVELLVDRETIVHELGSHTELATLVNGLCRH 362
           IALEQCHYSDQPF+CNYV+LIDSLIHTQEDVELLVD E I HELGSHTELAT++NGLC+H
Sbjct: 119 IALEQCHYSDQPFICNYVTLIDSLIHTQEDVELLVDTEIIDHELGSHTELATMINGLCKH 178

Query: 363 MVVTSNYYGKIIRELNEHYNSCWKHYMGMLRSVYFRDPWRLSSTIXXXXXXXXXXXXXXX 542
           ++VTSNYYGK  +ELNEHYN CWKHYMGML SVYFRDPWR SSTI               
Sbjct: 179 VLVTSNYYGKTTKELNEHYNCCWKHYMGMLISVYFRDPWRFSSTIVGIAVFLFAVVNFLR 238

Query: 543 XIGVLHPN 566
            IGV  PN
Sbjct: 239 IIGVFRPN 246


>ref|XP_003529045.1| PREDICTED: UPF0481 protein At3g47200-like [Glycine max]
          Length = 464

 Score =  300 bits (767), Expect = 2e-79
 Identities = 139/187 (74%), Positives = 155/187 (82%)
 Frame = +3

Query: 3   GVSFERVQGRSFLDIRFKSTPILSWFLCLGCLRFTRCLKVRLQIPQLKVDQVTECVLRNL 182
           GV+FE+VQGRS+LDI+F+ TPILSWFLC GCL F++C K RLQIP LKV+QVTECVLRNL
Sbjct: 276 GVNFEKVQGRSYLDIKFEKTPILSWFLCFGCLPFSKCFKARLQIPHLKVNQVTECVLRNL 335

Query: 183 IALEQCHYSDQPFVCNYVSLIDSLIHTQEDVELLVDRETIVHELGSHTELATLVNGLCRH 362
           IALEQCHYSDQPF+CNYV+LIDSLIHTQEDVELLVD E I HELGSHTELAT++NGLC+H
Sbjct: 336 IALEQCHYSDQPFICNYVTLIDSLIHTQEDVELLVDTEIIEHELGSHTELATMINGLCKH 395

Query: 363 MVVTSNYYGKIIRELNEHYNSCWKHYMGMLRSVYFRDPWRLSSTIXXXXXXXXXXXXXXX 542
           +VVTSNYYGK  +ELNEHYN CWKHY+GML SVYFRDPWR SSTI               
Sbjct: 396 VVVTSNYYGKTTKELNEHYNCCWKHYLGMLISVYFRDPWRFSSTIVGTAVFLFAVVNFLR 455

Query: 543 XIGVLHP 563
            IGV  P
Sbjct: 456 IIGVFRP 462


>gb|ACU17730.1| unknown [Glycine max]
          Length = 244

 Score =  300 bits (767), Expect = 2e-79
 Identities = 139/187 (74%), Positives = 155/187 (82%)
 Frame = +3

Query: 3   GVSFERVQGRSFLDIRFKSTPILSWFLCLGCLRFTRCLKVRLQIPQLKVDQVTECVLRNL 182
           GV+FE+VQGRS+LDI+F+ TPILSWFLC GCL F++C K RLQIP LKV+QVTECVLRNL
Sbjct: 56  GVNFEKVQGRSYLDIKFEKTPILSWFLCFGCLPFSKCFKARLQIPHLKVNQVTECVLRNL 115

Query: 183 IALEQCHYSDQPFVCNYVSLIDSLIHTQEDVELLVDRETIVHELGSHTELATLVNGLCRH 362
           IALEQCHYSDQPF+CNYV+LIDSLIHTQEDVELLVD E I HELGSHTELAT++NGLC+H
Sbjct: 116 IALEQCHYSDQPFICNYVTLIDSLIHTQEDVELLVDTEIIEHELGSHTELATMINGLCKH 175

Query: 363 MVVTSNYYGKIIRELNEHYNSCWKHYMGMLRSVYFRDPWRLSSTIXXXXXXXXXXXXXXX 542
           +VVTSNYYGK  +ELNEHYN CWKHY+GML SVYFRDPWR SSTI               
Sbjct: 176 VVVTSNYYGKTTKELNEHYNCCWKHYLGMLISVYFRDPWRFSSTIVGTAVFLFAVVNFLR 235

Query: 543 XIGVLHP 563
            IGV  P
Sbjct: 236 IIGVFRP 242


>ref|XP_003520436.1| PREDICTED: UPF0481 protein At3g47200-like [Glycine max]
          Length = 470

 Score =  278 bits (712), Expect = 6e-73
 Identities = 128/166 (77%), Positives = 145/166 (87%), Gaps = 1/166 (0%)
 Frame = +3

Query: 3   GVSFERVQG-RSFLDIRFKSTPILSWFLCLGCLRFTRCLKVRLQIPQLKVDQVTECVLRN 179
           GVSFE++   +  LDI+FK  P+LSWFLCLGC+  + C+K RLQIPQLKV Q TECVLRN
Sbjct: 281 GVSFEKLHHHKCLLDIKFKMVPVLSWFLCLGCIPCSMCVKARLQIPQLKVLQTTECVLRN 340

Query: 180 LIALEQCHYSDQPFVCNYVSLIDSLIHTQEDVELLVDRETIVHELGSHTELATLVNGLCR 359
           LIALEQCHYSDQPF+CNYVSLIDSLIHTQEDVELLVD+E IVHELG H ELAT++NGLC+
Sbjct: 341 LIALEQCHYSDQPFICNYVSLIDSLIHTQEDVELLVDKEIIVHELGCHNELATMINGLCK 400

Query: 360 HMVVTSNYYGKIIRELNEHYNSCWKHYMGMLRSVYFRDPWRLSSTI 497
           H+VV  NYYGK  R+LN+HYN CWKHYMGMLRSVYFRDPWRLSST+
Sbjct: 401 HVVVNCNYYGKTSRKLNDHYNCCWKHYMGMLRSVYFRDPWRLSSTV 446


>gb|AFK44374.1| unknown [Lotus japonicus]
          Length = 461

 Score =  238 bits (608), Expect = 6e-61
 Identities = 109/164 (66%), Positives = 135/164 (82%)
 Frame = +3

Query: 3   GVSFERVQGRSFLDIRFKSTPILSWFLCLGCLRFTRCLKVRLQIPQLKVDQVTECVLRNL 182
           GV+FE V  R+ L+I+FK   +L+WFLCLGC+   +  + RLQ+PQ K  Q TECVLRNL
Sbjct: 272 GVTFEVVHNRAMLEIKFKRIQVLNWFLCLGCIPGFKFFQCRLQMPQFKATQTTECVLRNL 331

Query: 183 IALEQCHYSDQPFVCNYVSLIDSLIHTQEDVELLVDRETIVHELGSHTELATLVNGLCRH 362
           IALEQCHYSDQPF+C+YVSLIDSL+++ +DV LLVD+E IVHELGS+ ELA + NGLC++
Sbjct: 332 IALEQCHYSDQPFICSYVSLIDSLVNSNQDVSLLVDKEIIVHELGSNQELAEMTNGLCKN 391

Query: 363 MVVTSNYYGKIIRELNEHYNSCWKHYMGMLRSVYFRDPWRLSST 494
           +VVT+NYYGKI R+LN+HY   WK YMGML SVYFRDPWR+SST
Sbjct: 392 VVVTNNYYGKISRKLNDHYYCKWKRYMGMLTSVYFRDPWRISST 435


Top