BLASTX nr result

ID: Glycyrrhiza23_contig00015266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015266
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536072.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   243   2e-62
ref|XP_003591129.1| DEAD-box ATP-dependent RNA helicase [Medicag...   235   6e-60
ref|XP_003635571.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   212   5e-53
ref|XP_004143411.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   201   9e-50
ref|NP_195217.1| DEAD-box ATP-dependent RNA helicase 16 [Arabido...   199   3e-49

>ref|XP_003536072.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like [Glycine
           max]
          Length = 601

 Score =  243 bits (620), Expect = 2e-62
 Identities = 129/167 (77%), Positives = 140/167 (83%)
 Frame = +2

Query: 122 MAETNENTPKXXXXXXXXXXXXXXXXXXXXXXLDSRLVHALLKKGIEKPTPIQRVAIPLI 301
           MAET+E+TPK                      +D+RL+ AL+KK IEKPTPIQRVAIPLI
Sbjct: 1   MAETHEDTPKETVHKEEEEEDQSFEELG----VDARLLRALIKKRIEKPTPIQRVAIPLI 56

Query: 302 LEGKDVVARAKTGSGKTFAYLLPLLQKLFTSNVDRKKLAPNAFVLVPTRELCQQVYAEVK 481
           LEGKDVVARAKTGSGKT AYLLPLLQKLFT+N DRKKLAPNAFVLVPTREL QQVYAEVK
Sbjct: 57  LEGKDVVARAKTGSGKTLAYLLPLLQKLFTANSDRKKLAPNAFVLVPTRELSQQVYAEVK 116

Query: 482 SLLELCKVQLKVVQLNSNMLANDLRAALAGPPDVLISTPACIAKCLS 622
           SL+ELC+VQLKVVQLNSNMLANDLRAALAGPPD+LISTPAC+AKCLS
Sbjct: 117 SLVELCRVQLKVVQLNSNMLANDLRAALAGPPDILISTPACVAKCLS 163


>ref|XP_003591129.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355480177|gb|AES61380.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 604

 Score =  235 bits (599), Expect = 6e-60
 Identities = 119/138 (86%), Positives = 125/138 (90%)
 Frame = +2

Query: 218 LDSRLVHALLKKGIEKPTPIQRVAIPLILEGKDVVARAKTGSGKTFAYLLPLLQKLFTSN 397
           LD+RLV ALLKK IEKPTPIQ VAIPLILEGKDVVARAKTGSGKT AYLLPLLQKLFT+N
Sbjct: 32  LDARLVRALLKKRIEKPTPIQHVAIPLILEGKDVVARAKTGSGKTLAYLLPLLQKLFTAN 91

Query: 398 VDRKKLAPNAFVLVPTRELCQQVYAEVKSLLELCKVQLKVVQLNSNMLANDLRAALAGPP 577
           VDRKKLAPN FVL P+RELCQQ+Y EVKSLLELCKV LK VQLNSNMLA DL+AAL GPP
Sbjct: 92  VDRKKLAPNVFVLAPSRELCQQIYVEVKSLLELCKVPLKAVQLNSNMLATDLQAALVGPP 151

Query: 578 DVLISTPACIAKCLSGEI 631
           DVLISTPACIAKCLS  +
Sbjct: 152 DVLISTPACIAKCLSNSV 169


>ref|XP_003635571.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like, partial
           [Vitis vinifera]
          Length = 301

 Score =  212 bits (539), Expect = 5e-53
 Identities = 106/138 (76%), Positives = 119/138 (86%)
 Frame = +2

Query: 218 LDSRLVHALLKKGIEKPTPIQRVAIPLILEGKDVVARAKTGSGKTFAYLLPLLQKLFTSN 397
           L+  L+ AL+KKGIEKPTPIQ VAIPLILEGKDVVARAKTGSGKTFAYLLPLLQKLF  +
Sbjct: 31  LEPSLIRALIKKGIEKPTPIQEVAIPLILEGKDVVARAKTGSGKTFAYLLPLLQKLFCES 90

Query: 398 VDRKKLAPNAFVLVPTRELCQQVYAEVKSLLELCKVQLKVVQLNSNMLANDLRAALAGPP 577
             R KLAP+AFVLVPTRELCQQVY+EV SL+ELC+ QLKVVQL S+M  +DLR ALAGPP
Sbjct: 91  ESRNKLAPSAFVLVPTRELCQQVYSEVLSLIELCRGQLKVVQLTSSMSPSDLRVALAGPP 150

Query: 578 DVLISTPACIAKCLSGEI 631
           D+L+STP CI KCLS  +
Sbjct: 151 DILVSTPGCIPKCLSAGV 168


>ref|XP_004143411.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like [Cucumis
           sativus] gi|449508529|ref|XP_004163338.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 16-like [Cucumis
           sativus]
          Length = 596

 Score =  201 bits (511), Expect = 9e-50
 Identities = 100/138 (72%), Positives = 116/138 (84%)
 Frame = +2

Query: 218 LDSRLVHALLKKGIEKPTPIQRVAIPLILEGKDVVARAKTGSGKTFAYLLPLLQKLFTSN 397
           LD RLV AL+KK I+KPTPIQ VAIPLILEGKDVVARAKTGSGKTFAYLLPLLQKLFT +
Sbjct: 28  LDPRLVRALIKKEIQKPTPIQHVAIPLILEGKDVVARAKTGSGKTFAYLLPLLQKLFTGS 87

Query: 398 VDRKKLAPNAFVLVPTRELCQQVYAEVKSLLELCKVQLKVVQLNSNMLANDLRAALAGPP 577
             +KK  P+A VLVPTREL QQVY E+ SL+E C+VQ+KV QL S+M  +DLR ALAGPP
Sbjct: 88  STKKKSGPSAVVLVPTRELSQQVYKEISSLIETCRVQVKVAQLTSSMSHSDLRTALAGPP 147

Query: 578 DVLISTPACIAKCLSGEI 631
           D++++TPACI KCLS  +
Sbjct: 148 DIIVATPACIPKCLSAGV 165


>ref|NP_195217.1| DEAD-box ATP-dependent RNA helicase 16 [Arabidopsis thaliana]
           gi|75337761|sp|Q9SW44.1|RH16_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 16
           gi|5123708|emb|CAB45452.1| RNA helicase (RH16)
           [Arabidopsis thaliana] gi|7270442|emb|CAB80208.1| RNA
           helicase (RH16) [Arabidopsis thaliana]
           gi|27754373|gb|AAO22635.1| putative DEAD/DEAH box RNA
           helicase protein [Arabidopsis thaliana]
           gi|28394057|gb|AAO42436.1| putative DEAD/DEAH box RNA
           helicase protein [Arabidopsis thaliana]
           gi|332661036|gb|AEE86436.1| DEAD-box ATP-dependent RNA
           helicase 16 [Arabidopsis thaliana]
          Length = 626

 Score =  199 bits (507), Expect = 3e-49
 Identities = 101/139 (72%), Positives = 120/139 (86%), Gaps = 1/139 (0%)
 Frame = +2

Query: 218 LDSRLVHALLKKGIEKPTPIQRVAIPLILEGKDVVARAKTGSGKTFAYLLPLLQKLFTSN 397
           LDSRL+ AL KKGIEKPT IQ+ AIP ILEGKDVVARAKTGSGKT AYLLPLLQKLF+++
Sbjct: 53  LDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLLQKLFSAD 112

Query: 398 -VDRKKLAPNAFVLVPTRELCQQVYAEVKSLLELCKVQLKVVQLNSNMLANDLRAALAGP 574
            V +KKLAP+AF+LVP+RELCQQVY EV SL+ELC+VQLK VQL S+M A+D+R ALAG 
Sbjct: 113 SVSKKKLAPSAFILVPSRELCQQVYTEVSSLIELCRVQLKAVQLTSSMSASDMRNALAGL 172

Query: 575 PDVLISTPACIAKCLSGEI 631
           P++L+STPACI KC +  +
Sbjct: 173 PEILVSTPACIPKCFAAGV 191


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