BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015210
         (3571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552970.1| PREDICTED: helicase SKI2W-like [Glycine max]     1988   0.0  
ref|XP_002279903.2| PREDICTED: helicase SKI2W-like [Vitis vinifera]  1652   0.0  
ref|XP_004145322.1| PREDICTED: helicase SKI2W-like [Cucumis sati...  1573   0.0  
ref|XP_002520439.1| helicase, putative [Ricinus communis] gi|223...  1556   0.0  
ref|NP_190280.5| antiviral helicase SKI2 [Arabidopsis thaliana] ...  1508   0.0  

>ref|XP_003552970.1| PREDICTED: helicase SKI2W-like [Glycine max]
          Length = 1342

 Score = 1988 bits (5150), Expect = 0.0
 Identities = 998/1137 (87%), Positives = 1050/1137 (92%), Gaps = 6/1137 (0%)
 Frame = +1

Query: 178  MDPIPVANELAFRVGFSGHSGHLRVEPLSTAEQNNPLRSIPDFVLPPAFPRETPESIKKY 357
            MDPI  ANELAFRVGFSGHSGHLR+EPLST E+ NPLRSIPDF+ PPAFP ETPESIKKY
Sbjct: 1    MDPIQAANELAFRVGFSGHSGHLRLEPLSTEERRNPLRSIPDFIPPPAFPSETPESIKKY 60

Query: 358  IEETYLQPGLDADEFSPEKVGRQWEFDWFDRAKVPLEPSLPRTVVVPIWEPPFRRP---- 525
            IEETYLQP LD D+FSPEKVGRQWEFDWFDRAKVPLEPSLPRT+VVP+WEPPFRR     
Sbjct: 61   IEETYLQPRLDPDDFSPEKVGRQWEFDWFDRAKVPLEPSLPRTMVVPVWEPPFRRSNNGS 120

Query: 526  VKGTWEPKFEEVSVSDLTSGAVESGPLPRTSTKDFVRGSINNRPFRPGGLDDSRGLERTL 705
            VKG WEPKFEEV V+DLTSGAVESGPLPRTS KDFVRGSINNRPFRPGGLDDSR L+R L
Sbjct: 121  VKGIWEPKFEEVDVADLTSGAVESGPLPRTSGKDFVRGSINNRPFRPGGLDDSRSLDRIL 180

Query: 706  PPGASDGEWVHEILNGGPAQTIPPSLKQGLDLGALKPYSCSWNVYEDTNTLKSSLDEKLS 885
            P GAS+GEWVHEILNGGPAQTIPPSLKQGLD G LKPY CSWNV ++ N+LKSS DEKLS
Sbjct: 181  PEGASNGEWVHEILNGGPAQTIPPSLKQGLDFGMLKPYPCSWNVCKEANSLKSSSDEKLS 240

Query: 886  GLSVQFDDLFKKAWEEDAVGEQEEDGHLSEVETVMLEAEVDATEVSSKAHESGMSLDDIL 1065
            GLSVQFDDLFKKAW+EDAVG+QE DGHLSEVET+ LEAEV  TEVSS+AHES MSLDDIL
Sbjct: 241  GLSVQFDDLFKKAWDEDAVGDQE-DGHLSEVETITLEAEVGTTEVSSRAHESEMSLDDIL 299

Query: 1066 SDDLEGSKLHLDGFSAEVGQQQKEAWALHEASERIADHFHELVPDMALEFPFELDAFQKE 1245
            S D EGSKLHLDGF+ E+GQQ+KEAWA+HE SE+I D FHELVPDMALEFPFELDAFQKE
Sbjct: 300  SADSEGSKLHLDGFNDEIGQQKKEAWAIHETSEQIVDSFHELVPDMALEFPFELDAFQKE 359

Query: 1246 AIYYLEKGESVFVAAHTSAGKTVVAEYAFALASKHCTRAVYTAPIKTISNQKYRDFCGKF 1425
            AIYYLEKGESVFVAAHTSAGKTVVAEYAFALASKHCTRAVYTAPIKTISNQKYRD CGKF
Sbjct: 360  AIYYLEKGESVFVAAHTSAGKTVVAEYAFALASKHCTRAVYTAPIKTISNQKYRDLCGKF 419

Query: 1426 DVGLLTGDLSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDVERGVVWE 1605
            DVGLLTGD+SLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDVERGVVWE
Sbjct: 420  DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDVERGVVWE 479

Query: 1606 EVIIMLPRHINIILLSATVPNTIEFADWISRTKQKQIRVTGTTKRPVPLEHCLFYSGELY 1785
            EVIIMLPRHINI+LLSATVPNTIEFADWI RTKQK+IRVTGTTKRPVPLEHCLFYSGELY
Sbjct: 480  EVIIMLPRHINIVLLSATVPNTIEFADWIGRTKQKEIRVTGTTKRPVPLEHCLFYSGELY 539

Query: 1786 KICERETFLPQGLKAAK-DASKKRNLTAAGGSGPKPGTSAGHDNARGQKRENTSRMKH-G 1959
            KICE E FLPQGLKAAK +AS+K+NLTA GGSGPKPG S GHD AR QKRENTS  KH G
Sbjct: 540  KICESEKFLPQGLKAAKKEASRKKNLTAGGGSGPKPGISPGHDKARVQKRENTSHTKHHG 599

Query: 1960 GNFSXXXXXXXXXXXXXXXWELRRADASMLLMLINKLSKKSLLPVVIFCFSKNRCDKSAD 2139
             NF                WELRRADASMLLMLINKLSKKSLLPVVIFCFSKNRCDKSAD
Sbjct: 600  ANFYGTGRGYQNNGNGQSNWELRRADASMLLMLINKLSKKSLLPVVIFCFSKNRCDKSAD 659

Query: 2140 SMTRTDLTSSSEKSEIRLFCDKAFSRLKGSDRNLPQVVRVQNLLCRGIGVHHAGLLPIVK 2319
            S+T TDLTSSSEKSEIRLFCDKAFSRLKGSD+NLPQVVRVQNLL RGIGVHHAGLLPIVK
Sbjct: 660  SLTGTDLTSSSEKSEIRLFCDKAFSRLKGSDKNLPQVVRVQNLLRRGIGVHHAGLLPIVK 719

Query: 2320 EVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDTLRKFDGKEFRQLLPGEYTQMAGRA 2499
            EVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDTLRKFDGKEFRQLL GEYTQMAGRA
Sbjct: 720  EVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDTLRKFDGKEFRQLLAGEYTQMAGRA 779

Query: 2500 GRRGIDKIGTVILMCRDELPEERDLKHVIVGSATRLESQFRLTYIMILHLLRVEELKVED 2679
            GRRG+DKIGTVILMCRDELPEE DL+ VIVGSATRLESQFRLTYIMILHLLRVEELKVED
Sbjct: 780  GRRGLDKIGTVILMCRDELPEESDLEPVIVGSATRLESQFRLTYIMILHLLRVEELKVED 839

Query: 2680 MLKRSFSEFHAQKKLPEMQQLLKRKLNQPTRAIECIKGEPTIEEYCDLYLEAETYSNQIS 2859
            MLKRSF+EFHAQKKLPEMQQLLKRKLNQPT+AIEC+KGEPTIEEY DLYLEAETYSNQIS
Sbjct: 840  MLKRSFAEFHAQKKLPEMQQLLKRKLNQPTKAIECLKGEPTIEEYYDLYLEAETYSNQIS 899

Query: 2860 EAVLQSPNAQPFFNTGRVVIIKSESAQDHLLAVIVKTPSPNNKLYIVFVIKPDMPSLVEN 3039
            EA+LQSP+AQ F NTGRVVI+KSESAQDHLL V+V+TPSP NK+YIVFVIKPDMPS V+N
Sbjct: 900  EAILQSPSAQQFLNTGRVVIVKSESAQDHLLGVVVETPSPTNKMYIVFVIKPDMPSSVDN 959

Query: 3040 ASSSGNLQDKGSAFDQGYFVMPKSRRGLVDEYSTSVSARKGRGVINIKLPHRGSACGMSY 3219
            ASSSGN+Q+K  AFDQGYFVMPKSRR +VDEYSTSVSARKG+GVI I+LP+ GSACGM Y
Sbjct: 960  ASSSGNMQNKSGAFDQGYFVMPKSRRVVVDEYSTSVSARKGKGVITIRLPYSGSACGMGY 1019

Query: 3220 EVREVDSKEFLCICSSKIKIDQVGLLEDVSSSVYSKTVQLLLDLKSDGNKYPPALDPVKD 3399
            EVREVDSKEFLCICSSKIKID+VGLLED+SSSVYSKTVQLL+DLKSDGNKYPPALDPVKD
Sbjct: 1020 EVREVDSKEFLCICSSKIKIDRVGLLEDISSSVYSKTVQLLMDLKSDGNKYPPALDPVKD 1079

Query: 3400 LKLRDVQLVQTYLKWTKLLEKMSQNQCHGCIKLEEHLKLAKEIKVHKEEVCALQFQM 3570
            LKLRDV+LV TY KWT+LLEKMSQNQCHGCIKLEEHLKLAKEIK HKEEV ALQFQM
Sbjct: 1080 LKLRDVKLVATYHKWTRLLEKMSQNQCHGCIKLEEHLKLAKEIKKHKEEVYALQFQM 1136


>ref|XP_002279903.2| PREDICTED: helicase SKI2W-like [Vitis vinifera]
          Length = 1379

 Score = 1652 bits (4277), Expect = 0.0
 Identities = 841/1174 (71%), Positives = 952/1174 (81%), Gaps = 43/1174 (3%)
 Frame = +1

Query: 178  MDPIPVANELAFRVGFSGHSGHLRVEPLSTAEQNNPLRSIPDFVLPPAFPRETPESIKKY 357
            M+ I V ++ +FRVGFSGHSGHLR+EPL   E+ NPL S+PDF+ PPAF RETPE+IK+Y
Sbjct: 1    MNRIQVGHDASFRVGFSGHSGHLRLEPLPPVERPNPLSSLPDFISPPAFARETPETIKEY 60

Query: 358  IEETYLQPGLDADEFSPEKVGRQWEFDWFDRAKVPLEPSLPRTVVVPIWEPPFRRPVK-- 531
            IE+TYL P LD DEFSPEKVGRQW+FDWFDRAKVPLEPSLPR+VVV  WE PFRR  K  
Sbjct: 61   IEDTYLLPRLDPDEFSPEKVGRQWDFDWFDRAKVPLEPSLPRSVVVQKWELPFRRSKKES 120

Query: 532  --GTWEPKFEEVSVSDLTSGAVESGPLPRT--STKDFVRGSINNRPFRPGGLDDSRGLER 699
              G WEP  EEV VSDL  GA ++GPLPR     KDF+RGSINNRPFRPGGLDDS+ L+R
Sbjct: 121  ASGKWEPISEEVEVSDLMVGAQDTGPLPRMVGPAKDFIRGSINNRPFRPGGLDDSQSLDR 180

Query: 700  TLPPGASDGEWVHEILNGGPAQTIPPSLKQGLDLGALKPYSCSWNVYEDTNTLKSSLDEK 879
              P GAS+GEWV E+LNGGPA  +PPS KQGLDLG LK YS SW VY+  + LK   +E 
Sbjct: 181  IPPLGASNGEWVQEVLNGGPALVVPPSFKQGLDLGDLKAYSHSWKVYKGQSALKGKSEEN 240

Query: 880  LSGLSVQFDDLFKKAWEEDAVGEQEEDG-------------------------HLSEVET 984
            L+ LS+QFDDL KKAWEED V E +EDG                         H  E ++
Sbjct: 241  LNKLSIQFDDLLKKAWEEDDVAESKEDGIICTFYILALGTNVCKVTDSWAKSCHSPESDS 300

Query: 985  VMLEAEVDATEVSSKAHESGMS-LDDILSDDLEGSKLHLDGFSAEVGQQQKEAWALHEAS 1161
            + LE ++D  E SS   +   S LD+ILS +  GSK  LDG S + G+Q+KEAWA+   +
Sbjct: 301  IKLEVQLDEVEASSNVGDLESSVLDEILSVE-SGSKPGLDGTSDDGGRQKKEAWAVSGGN 359

Query: 1162 ERIADHFHELVPDMALEFPFELDAFQKEAIYYLEKGESVFVAAHTSAGKTVVAEYAFALA 1341
            E IADHFHELVPDMAL+FPFELD FQKEAIYYLEKG+SVFVAAHTSAGKTVVAEYAFALA
Sbjct: 360  EGIADHFHELVPDMALDFPFELDTFQKEAIYYLEKGDSVFVAAHTSAGKTVVAEYAFALA 419

Query: 1342 SKHCTRAVYTAPIKTISNQKYRDFCGKFDVGLLTGDLSLRPEASCLIMTTEILRSMLYRG 1521
            SKHCTRAVYTAPIKTISNQKYRDFCGKFDVGLLTGD+SLRPEASCLIMTTEILRSMLY+G
Sbjct: 420  SKHCTRAVYTAPIKTISNQKYRDFCGKFDVGLLTGDVSLRPEASCLIMTTEILRSMLYKG 479

Query: 1522 ADIIRDIEWVIFDEVHYVNDVERGVVWEEVIIMLPRHINIILLSATVPNTIEFADWISRT 1701
            ADIIRDIEWVIFDEVHYVNDVERGVVWEEVIIMLPRHINI+LLSATVPNTIEFADWI RT
Sbjct: 480  ADIIRDIEWVIFDEVHYVNDVERGVVWEEVIIMLPRHINIVLLSATVPNTIEFADWIGRT 539

Query: 1702 KQKQIRVTGTTKRPVPLEHCLFYSGELYKICERETFLPQGLKAAKDASKKRNL-TAAGGS 1878
            KQKQIRVTGTTKRPVPLEHC+FYSGELYKICE ETFLPQGLK AKD  KK+NL T  GGS
Sbjct: 540  KQKQIRVTGTTKRPVPLEHCIFYSGELYKICESETFLPQGLKTAKDVHKKKNLSTGGGGS 599

Query: 1879 GPKPGT-SAGHDNARGQKRENTSRMKHG--------GNFSXXXXXXXXXXXXXXXWELRR 2031
            G   G  SA HD AR Q+REN  R K          GNF                W  RR
Sbjct: 600  GTYSGPPSAAHDGARAQRRENPGRGKQNKYSGSQKVGNFYGTGGGNQNSSGSQSNWGSRR 659

Query: 2032 ADASMLLMLINKLSKKSLLPVVIFCFSKNRCDKSADSMTRTDLTSSSEKSEIRLFCDKAF 2211
            ++AS+ L+LINKLSKKSLLPVVIFCFSKNRCD SAD MT  DLTSSSEK EI +FC++AF
Sbjct: 660  SEASLWLLLINKLSKKSLLPVVIFCFSKNRCDISADKMTGIDLTSSSEKHEIHVFCERAF 719

Query: 2212 SRLKGSDRNLPQVVRVQNLLCRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMG 2391
            SRLKGSDRNLPQV+RVQ+LL RGIGVHHAGLLPIVKEVVEMLFCRGV+KVLFSTETFAMG
Sbjct: 720  SRLKGSDRNLPQVIRVQSLLRRGIGVHHAGLLPIVKEVVEMLFCRGVVKVLFSTETFAMG 779

Query: 2392 VNAPARTVVFDTLRKFDGKEFRQLLPGEYTQMAGRAGRRGIDKIGTVILMCRDELPEERD 2571
            VNAPARTVVFD+LRKFDG+EFRQLLPGEYTQMAGRAGRRG+DKIGTV++MCRDE+P+ERD
Sbjct: 780  VNAPARTVVFDSLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVMCRDEIPDERD 839

Query: 2572 LKHVIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFSEFHAQKKLPEMQQLLKR 2751
            LKHVIVGSATRL SQFRLTYIMILHLLRVEELKVEDMLKRSF+EFHAQKKLPE QQLL R
Sbjct: 840  LKHVIVGSATRLASQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPEKQQLLMR 899

Query: 2752 KLNQPTRAIECIKGEPTIEEYCDLYLEAETYSNQISEAVLQSPNAQPFFNTGRVVIIKSE 2931
            KL QPT+ IECIKGEPTIEEY D+Y EAE +SNQI E V+QS  AQ F   GRVV++KS+
Sbjct: 900  KLAQPTKTIECIKGEPTIEEYYDMYTEAEQHSNQILETVMQSSAAQQFLTLGRVVVVKSQ 959

Query: 2932 SAQDHLLAVIVKTPSPNNKLYIVFVIKPDMPSLVENASSSGNLQDKGS-AFDQGYFVMPK 3108
            S QDHL+ V+VK PS ++K YIV V+KP +PS ++  S SGNLQDK S AF +G+F++PK
Sbjct: 960  SVQDHLIGVVVKAPSASSKQYIVLVLKPHLPSTLQTPSESGNLQDKKSGAFPEGHFILPK 1019

Query: 3109 SRRGLVDEYSTSVSARKGRGVINIKLPHRGSACGMSYEVREVDSKEFLCICSSKIKIDQV 3288
            ++R L D+Y TS ++RK  G INIKLP+ G+A G+SYEVR +D+KEFLCIC  KIKID V
Sbjct: 1020 AKRALEDDYYTSTTSRKASGTINIKLPYHGAAAGVSYEVRGIDNKEFLCICIHKIKIDPV 1079

Query: 3289 GLLEDVSSSVYSKTVQLLLDLKSDGNKYPPALDPVKDLKLRDVQLVQTYLKWTKLLEKMS 3468
            GLLED +++ YSKTVQ LL+LKS G+KYPPALDP+KDLKL+D+ LV+TY KW  LL+KM+
Sbjct: 1080 GLLEDANNAAYSKTVQQLLELKSKGHKYPPALDPLKDLKLKDMTLVETYYKWNSLLQKMA 1139

Query: 3469 QNQCHGCIKLEEHLKLAKEIKVHKEEVCALQFQM 3570
             N+CH C+KLEEH+KLAKE+K HKEEV AL+FQM
Sbjct: 1140 DNKCHECVKLEEHIKLAKELKRHKEEVNALRFQM 1173


>ref|XP_004145322.1| PREDICTED: helicase SKI2W-like [Cucumis sativus]
          Length = 1352

 Score = 1573 bits (4072), Expect = 0.0
 Identities = 823/1154 (71%), Positives = 930/1154 (80%), Gaps = 23/1154 (1%)
 Frame = +1

Query: 178  MDPIPVANELAFRVGFSGHSGHLRVEPLSTAEQNNPLRSIPDFVLPPAFPRETPESIKKY 357
            MDPI    EL+FRVGFSGHSGHLRVEPLST E++ P+RS+PDF+LPPAFP+ETPE+IK Y
Sbjct: 1    MDPIEATKELSFRVGFSGHSGHLRVEPLSTVERSTPIRSLPDFILPPAFPKETPETIKNY 60

Query: 358  IEETYLQPGLDADEFSPEKVGRQWEFDWFDRAKVPLEPSLPRTVVVPIWEPPFRRPVK-- 531
            IEETYLQP LD DEFSPEKVGRQW+FDWF+ AKV L+PS PR+VVVP W  PF RP K  
Sbjct: 61   IEETYLQPRLDPDEFSPEKVGRQWDFDWFEMAKVSLDPSPPRSVVVPTWVLPFERPKKDG 120

Query: 532  ---GTWEPKFEEVSVSDLTSGAVESGPLPRTS--TKDFVRGSINNRPFRPGGLDDSRGLE 696
               GTWEP   +V VS+L     ESG  PR     KDFVRGSINNRPFRPGGLDDS+ ++
Sbjct: 121  AAGGTWEPDSRQVDVSELNVETQESGSQPRVPGPAKDFVRGSINNRPFRPGGLDDSQSID 180

Query: 697  RTLPPGASDGEWVHEILNGGPAQTIPPSLKQGLDLGALKPYSCSWNVYED--TNTLKSSL 870
            R LP  AS+GEWVHE+LNGGPAQ IPP LK+GLDLG LK Y  SWNVYE+  +++ K+S 
Sbjct: 181  RILPDAASNGEWVHEVLNGGPAQFIPPILKKGLDLGDLKEYPNSWNVYENQSSSSFKTSP 240

Query: 871  DEKLSGLSVQFDDLFKKAWEEDAVGEQEEDGHLS----EVETVMLEAEVDATEVSSKAHE 1038
             E LS LSVQFDDLFKKAWEEDA+ E  EDG  S    + E++  E  V   E  S A  
Sbjct: 241  IENLSELSVQFDDLFKKAWEEDAI-ESVEDGVYSGQSPKAESIKSEDRVRELEAISIAPA 299

Query: 1039 SGMS-LDDILSDDLEGSKLHLDGFSAEVGQQQKEAWALHEASERIADHFHELVPDMALEF 1215
             G+S LD+ILS +  G  L  D  + EVG Q+KEAW +    E I+  FH+LVPDMAL+F
Sbjct: 300  PGISALDEILSLESGGFSLSSDQ-ATEVGAQKKEAWVVVGGREDISLRFHDLVPDMALDF 358

Query: 1216 PFELDAFQKEAIYYLEKGESVFVAAHTSAGKTVVAEYAFALASKHCTRAVYTAPIKTISN 1395
            PFELD FQKEAIY+LEKG+SVFVAAHTSAGKTVVAEYAFALA+KHCTRAVYTAPIKTISN
Sbjct: 359  PFELDTFQKEAIYHLEKGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIKTISN 418

Query: 1396 QKYRDFCGKFDVGLLTGDLSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYV 1575
            QKYRDFCGKFDVGLLTGD+SLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYV
Sbjct: 419  QKYRDFCGKFDVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYV 478

Query: 1576 NDVERGVVWEEVIIMLPRHINIILLSATVPNTIEFADWISRTKQKQIRVTGTTKRPVPLE 1755
            ND+ERGVVWEEVIIMLPRHINI+LLSATVPNTIEFADWI RTKQK+I VTGT KRPVPLE
Sbjct: 479  NDIERGVVWEEVIIMLPRHINIVLLSATVPNTIEFADWIGRTKQKRIHVTGTAKRPVPLE 538

Query: 1756 HCLFYSGELYKICERETFLPQGLKAAKDASKKRNLTAAGGSGPK-PGTSAGHDNARGQKR 1932
            HC+FYSGELYKICE E FL  GLKAAKDASKK+N +  GG+G    G S  +D  + +K 
Sbjct: 539  HCIFYSGELYKICESEIFLSHGLKAAKDASKKKNSSVVGGAGGSHAGASVANDGTKNRKV 598

Query: 1933 ENTSRMKHG--------GNFSXXXXXXXXXXXXXXXWELRRADASMLLMLINKLSKKSLL 2088
            E+ +R K          GNFS               W  RR+DAS+ L+LIN+LSKKSLL
Sbjct: 599  ESFNRSKQNKHSGSQNLGNFSGTSWGNQKNGDGHNNWGSRRSDASLWLLLINRLSKKSLL 658

Query: 2089 PVVIFCFSKNRCDKSADSMTRTDLTSSSEKSEIRLFCDKAFSRLKGSDRNLPQVVRVQNL 2268
            PVVIFCFSKNRCDKSAD++   DLTSSSEKSEIR+FCDKAFSRLKGSDR+LPQ+VRVQ L
Sbjct: 659  PVVIFCFSKNRCDKSADNIYSIDLTSSSEKSEIRVFCDKAFSRLKGSDRSLPQIVRVQGL 718

Query: 2269 LCRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDTLRKFDGK 2448
            L RGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDTLRKFDGK
Sbjct: 719  LRRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDTLRKFDGK 778

Query: 2449 EFRQLLPGEYTQMAGRAGRRGIDKIGTVILMCRDELPEERDLKHVIVGSATRLESQFRLT 2628
            EFRQLLPGEYTQMAGRAGRRG+DKIGTVI+MCR+E+PEE+DLK VIVG+AT+LESQFRLT
Sbjct: 779  EFRQLLPGEYTQMAGRAGRRGLDKIGTVIVMCREEIPEEKDLKRVIVGTATKLESQFRLT 838

Query: 2629 YIMILHLLRVEELKVEDMLKRSFSEFHAQKKLPEMQQLLKRKLNQPTRAIECIKGEPTIE 2808
            YIMILHLLRVEELKVEDMLKRSF+EFHAQKKLPE QQLL RKL QPTR IECIKGE TIE
Sbjct: 839  YIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPEKQQLLMRKLAQPTRTIECIKGEATIE 898

Query: 2809 EYCDLYLEAETYSNQISEAVLQSPNAQPFFNTGRVVIIKSESAQDHLLAVIVKTPSPNNK 2988
            EY DLY EAE  SNQ+SEAV+QS   Q F   GRVVI+KS+SA+DHLL VIVK  +  N+
Sbjct: 899  EYYDLYAEAEKPSNQLSEAVMQSSAIQQFLVPGRVVIVKSQSAKDHLLGVIVK--ANMNR 956

Query: 2989 LYIVFVIKPDMPSLVENASSSGNLQDKGSAFDQGYFVMPKSRRGLVDEYSTSVSARKGRG 3168
             YIV V+ PD  SL   +SSS +L+ K     QGYF++PKS+RGL ++Y  S S RKG G
Sbjct: 957  QYIVLVLMPD--SLPTQSSSSSDLEKKKQDLTQGYFMVPKSKRGLENDY-YSPSTRKGSG 1013

Query: 3169 VINIKLPHRGSACGMSYEVREVDSKEFLCICSSKIKIDQVGLLEDVSSSVYSKTVQLLLD 3348
            ++NI+LPH G+A G+SYEVR VD+K+FLC+C+ KIK+D   LLE+VS+  YS+TVQ LLD
Sbjct: 1014 LVNIRLPHAGAAVGISYEVRGVDAKDFLCVCTKKIKLDSGRLLEEVSNVAYSQTVQQLLD 1073

Query: 3349 LKSDGNKYPPALDPVKDLKLRDVQLVQTYLKWTKLLEKMSQNQCHGCIKLEEHLKLAKEI 3528
            +KSDG KYPPALDP+KDLKL+DV LV+ Y   T +  KM  N+CHGCIKL EHLKLA EI
Sbjct: 1074 IKSDG-KYPPALDPLKDLKLKDVNLVEAYKNLTDISLKMIANKCHGCIKLGEHLKLAAEI 1132

Query: 3529 KVHKEEVCALQFQM 3570
            K HKEEV  L+FQM
Sbjct: 1133 KKHKEEVNNLKFQM 1146


>ref|XP_002520439.1| helicase, putative [Ricinus communis] gi|223540281|gb|EEF41852.1|
            helicase, putative [Ricinus communis]
          Length = 1335

 Score = 1556 bits (4028), Expect = 0.0
 Identities = 802/1148 (69%), Positives = 929/1148 (80%), Gaps = 17/1148 (1%)
 Frame = +1

Query: 178  MDPIPVANELAFRVGFSGHSGHLRVEPLSTAE-QNNPLRSIPDFVLPPAFPRETPESIKK 354
            M+ I   NEL+FRVGFSG+SGHLRVEPLST E + +P++S+PDF+LPPAFPRET ESIK+
Sbjct: 1    MNRIQATNELSFRVGFSGYSGHLRVEPLSTVEGRTDPVKSLPDFILPPAFPRETRESIKE 60

Query: 355  YIEETYLQPGLDADEFSPEKVGRQWEFDWFDRAKVPLEPSLPRTVVVPIWEPPFRRPV-- 528
            YIEE YL P LD+D FSPE  GRQW+FDWF++A V L PSLPR VVVP WE PFRR    
Sbjct: 61   YIEEEYLLPRLDSDVFSPENAGRQWDFDWFEKANVLLNPSLPRAVVVPTWESPFRRQKST 120

Query: 529  --KGTWEPKFEEVSVSDLTSGAVESGPLPRTS--TKDFVRGSINNRPFRPGGLDDSRGLE 696
              +G WEPK  ++ VS+L   A +S  LPR +   KDFVRGSINNRPFRPGGLDDS+ LE
Sbjct: 121  SEQGIWEPKSVQMDVSELI--AQDSSSLPRIAGPAKDFVRGSINNRPFRPGGLDDSQSLE 178

Query: 697  RTLPPGASDGEWVHEILNGGPAQTIPPSLKQGLDLGALKPYSCSWNVYEDTNTLKSSLDE 876
            + LP GA++GEW+ E+LNGGPAQ+IPPSLK+GLDLG LK Y  SWNVY+D +   ++  E
Sbjct: 179  KILPAGAANGEWLREVLNGGPAQSIPPSLKKGLDLGDLKAYPSSWNVYKDQSPSDTASRE 238

Query: 877  KLSGLSVQFDDLFKKAWEEDAVGEQEEDGHLSEVETVMLEAEVDATEVSSKAHESGMS-L 1053
            KL   S + D+  K   + D V E     HL + E+   ++E    ++     E+ +S L
Sbjct: 239  KLVCHSSK-DEYLKS--DVDVVPEV----HLLKDESRKSDSEESKIDIQGSVFETEVSVL 291

Query: 1054 DDILSDDLEGSKLHLDGFSAEVGQQQKEAWALHEASERIADHFHELVPDMALEFPFELDA 1233
            D+ILS D  G     DG     G ++K+ WAL   SE IA+HF++L+PD AL+FPFELD 
Sbjct: 292  DEILSVDSGGLTSRSDGTGDGGGHKEKKGWALSGNSEWIAEHFYQLLPDTALDFPFELDT 351

Query: 1234 FQKEAIYYLEKGESVFVAAHTSAGKTVVAEYAFALASKHCTRAVYTAPIKTISNQKYRDF 1413
            FQKEAIYYLEKG+SVFVAAHTSAGKTVVAEYAFALASKHCTRAVYTAPIKTISNQKYRDF
Sbjct: 352  FQKEAIYYLEKGDSVFVAAHTSAGKTVVAEYAFALASKHCTRAVYTAPIKTISNQKYRDF 411

Query: 1414 CGKFDVGLLTGDLSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDVERG 1593
            CGKFDVGLLTGD+SLRPEA+CLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVND ERG
Sbjct: 412  CGKFDVGLLTGDVSLRPEANCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDAERG 471

Query: 1594 VVWEEVIIMLPRHINIILLSATVPNTIEFADWISRTKQKQIRVTGTTKRPVPLEHCLFYS 1773
            VVWEEVIIMLPRH+NI+LLSATVPNT+EFADWI RTKQK+I+VTGTTKRPVPLEHCLFYS
Sbjct: 472  VVWEEVIIMLPRHVNIVLLSATVPNTVEFADWIGRTKQKKIQVTGTTKRPVPLEHCLFYS 531

Query: 1774 GELYKICERETFLPQGLKAAKDASKKRNLTAAGGSGPKPGTSAGHDNARGQKRENTSRMK 1953
            GELYKICE ETF+PQGL+ AKDA KK+N +A        G+ A  D A G+KRE  +R K
Sbjct: 532  GELYKICENETFIPQGLRVAKDAHKKKNTSAVSS-----GSLALRDGAHGKKREYLNRNK 586

Query: 1954 --------HGGNFSXXXXXXXXXXXXXXXWELRRADASMLLMLINKLSKKSLLPVVIFCF 2109
                    + G+FS               W  RR++AS+ L L+NKLSKKSLLPVVIFCF
Sbjct: 587  QNKHFGSQNAGSFSGTSWGNQNNGNGQNNWGSRRSEASLWLQLVNKLSKKSLLPVVIFCF 646

Query: 2110 SKNRCDKSADSMTRTDLTSSSEKSEIRLFCDKAFSRLKGSDRNLPQVVRVQNLLCRGIGV 2289
            SKNRCDKSAD M+ TDLTSSSEKSEIR+FCDKAFSRLKGSDRNLPQ+VRVQ+LL RGIGV
Sbjct: 647  SKNRCDKSADGMSGTDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQSLLRRGIGV 706

Query: 2290 HHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDTLRKFDGKEFRQLLP 2469
            HHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDTLRKFDGKEFRQLLP
Sbjct: 707  HHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDTLRKFDGKEFRQLLP 766

Query: 2470 GEYTQMAGRAGRRGIDKIGTVILMCRDELPEERDLKHVIVGSATRLESQFRLTYIMILHL 2649
            GEYTQMAGRAGRRG+DKIGTVI+MCRDE+P+ERDLKHVIVGSATRLESQFRLTYIMILHL
Sbjct: 767  GEYTQMAGRAGRRGLDKIGTVIVMCRDEIPDERDLKHVIVGSATRLESQFRLTYIMILHL 826

Query: 2650 LRVEELKVEDMLKRSFSEFHAQKKLPEMQQLLKRKLNQPTRAIECIKGEPTIEEYCDLYL 2829
            LRVEELKVEDMLKRSF+EFH QKKLPE QQ+L RKL QPT+AIECIKGEP IEEY D++L
Sbjct: 827  LRVEELKVEDMLKRSFAEFHTQKKLPETQQVLMRKLAQPTKAIECIKGEPDIEEYYDMFL 886

Query: 2830 EAETYSNQISEAVLQSPNAQPFFNTGRVVIIKSESAQDHLLAVIVKTPSPNNKLYIVFVI 3009
            EAE YSNQISEAV+QS  AQ F   GRVV++KS+S QDHLL V+VK PS + K YIV V+
Sbjct: 887  EAEEYSNQISEAVMQSSAAQQFLTPGRVVVVKSQSGQDHLLGVVVKGPSTSMKQYIVLVL 946

Query: 3010 KPDMPSLVENASSSGNLQDKGSA-FDQGYFVMPKSRRGLVDEYSTSVSARKGRGVINIKL 3186
            KPD+PS    ++   NLQDK S    + Y +MPKS+RG  +EY  S ++RKG G +NIKL
Sbjct: 947  KPDLPS----STQISNLQDKKSGDIPKAYLLMPKSKRG-EEEYFYSTASRKGSGAVNIKL 1001

Query: 3187 PHRGSACGMSYEVREVDSKEFLCICSSKIKIDQVGLLEDVSSSVYSKTVQLLLDLKSDGN 3366
            P++G+A G++YEVR +D+ EFLCIC+ K+KIDQVGLLEDVS++ +SKTVQ L +LKSDGN
Sbjct: 1002 PYQGTAAGVNYEVRGMDNTEFLCICARKLKIDQVGLLEDVSNTAFSKTVQQLSELKSDGN 1061

Query: 3367 KYPPALDPVKDLKLRDVQLVQTYLKWTKLLEKMSQNQCHGCIKLEEHLKLAKEIKVHKEE 3546
            KYPPALDP+ DLK++DV LV+ Y KWT LL+KM++N+CHGCIKLEEHL LAKEIK HK+E
Sbjct: 1062 KYPPALDPLTDLKMKDVNLVEAYKKWTSLLQKMARNKCHGCIKLEEHLNLAKEIKKHKDE 1121

Query: 3547 VCALQFQM 3570
            +  L+FQM
Sbjct: 1122 IDKLRFQM 1129


>ref|NP_190280.5| antiviral helicase SKI2 [Arabidopsis thaliana]
            gi|332644703|gb|AEE78224.1| antiviral helicase SKI2
            [Arabidopsis thaliana]
          Length = 1347

 Score = 1508 bits (3903), Expect = 0.0
 Identities = 775/1145 (67%), Positives = 896/1145 (78%), Gaps = 14/1145 (1%)
 Frame = +1

Query: 178  MDPIPVANELAFRVGFSGHSGHLRVEPLSTAEQNNPLRSIPDFVLPPAFPRETPESIKKY 357
            M+ +   NEL FRVGFSGH GHLRVEP  TAE+++ L S+PDFV PPAF +ET ESIKK+
Sbjct: 1    MNKVEAGNELGFRVGFSGHGGHLRVEPFYTAERDDALNSLPDFVSPPAFAKETKESIKKH 60

Query: 358  IEETYLQPGLDADEFSPEKVGRQWEFDWFDRAKVPLEPSLPRTVVVPIWEPPFRRPVK-- 531
            IEE YL P L+ D+FS EK   QW+FDWF R K+PL+PSLPR+VVVP WE PFRR  +  
Sbjct: 61   IEEKYLIPRLEPDQFSAEKAENQWDFDWFSRVKMPLQPSLPRSVVVPTWELPFRRQKEDT 120

Query: 532  --GTWEPKFEEVSVSDLTSGAVESGPLPRT--STKDFVRGSINNRPFRPGGLDDSRGLER 699
              G WEPK  EV +S+   G  +SG  PR     KDF+RGS+NNRPFRPGGL+DS+  ER
Sbjct: 121  ENGAWEPKSVEVDLSEQMYGDQDSGFFPRMVGPPKDFLRGSVNNRPFRPGGLEDSQSSER 180

Query: 700  TLPPGASDGEWVHEILNGGPAQTIPPSLKQGLDLGALKPYSCSWNVYEDTNTLKSSLDEK 879
             LP G S G+WV E+LNGGPAQT+PPS KQ LDLG L PY  +W+VYED ++  ++ DE 
Sbjct: 181  VLPEGVSSGQWVQELLNGGPAQTVPPSFKQSLDLGDLMPYPQTWSVYEDHSSHGNASDEN 240

Query: 880  LSGLSVQFDDLFKKAWEEDAVGEQEEDGHLSEVETVMLEAEVDATEVSSKAHESGMSLD- 1056
             S LS+QFDDLFKKAWEED   E E D H +  E+   EAE DA    S     G+  D 
Sbjct: 241  SSKLSIQFDDLFKKAWEEDTFSELEGDDHTAGSESPKAEAEPDAKASISNEVSKGLETDV 300

Query: 1057 DILSDDLEGSKLHLDGFSAEVG----QQQKEAWALHEASERIADHFHELVPDMALEFPFE 1224
             +L + L  +K  +    A  G    Q +KE WA    S+ IAD F+ELVPDMA+EFPFE
Sbjct: 301  TVLDEILSSAKTAIMSEEAVTGSSDKQLRKEGWATKGDSQDIADRFYELVPDMAIEFPFE 360

Query: 1225 LDAFQKEAIYYLEKGESVFVAAHTSAGKTVVAEYAFALASKHCTRAVYTAPIKTISNQKY 1404
            LD FQKEAI  LEKGESVFVAAHTSAGKTVVAEYAFALA+KHCTRAVYTAPIKTISNQKY
Sbjct: 361  LDNFQKEAICCLEKGESVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIKTISNQKY 420

Query: 1405 RDFCGKFDVGLLTGDLSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDV 1584
            RDFCGKFDVGLLTGD+S+RPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDV
Sbjct: 421  RDFCGKFDVGLLTGDVSIRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDV 480

Query: 1585 ERGVVWEEVIIMLPRHINIILLSATVPNTIEFADWISRTKQKQIRVTGTTKRPVPLEHCL 1764
            ERGVVWEEVIIMLPRHIN +LLSATVPNT EFADWI RTKQK+IRVTGTTKRPVPLEHCL
Sbjct: 481  ERGVVWEEVIIMLPRHINFVLLSATVPNTFEFADWIGRTKQKEIRVTGTTKRPVPLEHCL 540

Query: 1765 FYSGELYKICERETFLPQGLKAAKDASKKRNLTAAGGSGPKP--GTSAGHDNARGQKREN 1938
            FYSGELYK+CE E FL +G+K AKD+ KK+N  A   + PK   G+SA  D ++ QK E 
Sbjct: 541  FYSGELYKVCENEVFLSKGIKDAKDSQKKKNSNAVSVA-PKQQMGSSAHQDGSKSQKHEA 599

Query: 1939 TSRMKHGGNFSXXXXXXXXXXXXXXX-WELRRADASMLLMLINKLSKKSLLPVVIFCFSK 2115
             SR K   + S                   RR+ AS  L+LINKLSK SLLPVV+FCFSK
Sbjct: 600  HSRGKQNKHSSVKDVGKSSYSGNSQNNGAFRRSAASNWLLLINKLSKMSLLPVVVFCFSK 659

Query: 2116 NRCDKSADSMTRTDLTSSSEKSEIRLFCDKAFSRLKGSDRNLPQVVRVQNLLCRGIGVHH 2295
            N CD+ AD++T TDLTSSSEKSEIR+FCDKAFSRLKGSDRNLPQV+R+Q+LL RGIGVHH
Sbjct: 660  NYCDRCADALTGTDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQVLRLQSLLHRGIGVHH 719

Query: 2296 AGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDTLRKFDGKEFRQLLPGE 2475
            AGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFD LRKFDGKEFRQLLPGE
Sbjct: 720  AGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDALRKFDGKEFRQLLPGE 779

Query: 2476 YTQMAGRAGRRGIDKIGTVILMCRDELPEERDLKHVIVGSATRLESQFRLTYIMILHLLR 2655
            YTQMAGRAGRRG+DK GTV++MCRDE+P+E DL+ VIVGSATRLESQFRLTYIMILHLLR
Sbjct: 780  YTQMAGRAGRRGLDKTGTVVVMCRDEVPDESDLRRVIVGSATRLESQFRLTYIMILHLLR 839

Query: 2656 VEELKVEDMLKRSFSEFHAQKKLPEMQQLLKRKLNQPTRAIECIKGEPTIEEYCDLYLEA 2835
            VEELKVEDMLKRSF+EFHAQKKLPE QQLL  K + PT+ IECIKGEP IE+Y D+Y+EA
Sbjct: 840  VEELKVEDMLKRSFAEFHAQKKLPEKQQLLMIKRSLPTKHIECIKGEPAIEDYYDMYMEA 899

Query: 2836 ETYSNQISEAVLQSPNAQPFFNTGRVVIIKSESAQDHLLAVIVKTPSPNNKLYIVFVIKP 3015
              Y+N++SEAV+QSP AQ F   GRVV++KS    D+LL +++K PS  N+ Y+V VIK 
Sbjct: 900  NEYNNKMSEAVMQSPYAQSFLVQGRVVVMKSGMGIDNLLGIVLKGPSNTNRQYVVLVIKS 959

Query: 3016 DMPSLVENASSSGNLQDKGSAFDQGYFVMPKSRRGLVDEYSTSVSARKGRGVINIKLPHR 3195
            ++P   +N  S G    K S   QGYF+ PKS+RG  +E+ T  S+RKG  VI I+LP+ 
Sbjct: 960  EIPPPEKNMVSIGK---KSSDPSQGYFIAPKSKRGFEEEFYTKPSSRKGPVVIKIELPYH 1016

Query: 3196 GSACGMSYEVREVDSKEFLCICSSKIKIDQVGLLEDVSSSVYSKTVQLLLDLKSDGNKYP 3375
            G A G+ YEV+  D+KEFLCIC SKIKIDQV LLED + + +S+TVQ LLDLKSDGNK+P
Sbjct: 1017 GVAAGVGYEVKGFDNKEFLCICDSKIKIDQVRLLEDGNKAAFSQTVQQLLDLKSDGNKFP 1076

Query: 3376 PALDPVKDLKLRDVQLVQTYLKWTKLLEKMSQNQCHGCIKLEEHLKLAKEIKVHKEEVCA 3555
            PALDPVKDLKL+D +LV+TY KWT LL+KMS N+CHGC+KLEEH+KLA+EIK HK ++  
Sbjct: 1077 PALDPVKDLKLKDAELVETYYKWTNLLQKMSMNKCHGCVKLEEHMKLAREIKKHKTDLKD 1136

Query: 3556 LQFQM 3570
            L+FQM
Sbjct: 1137 LEFQM 1141