BLASTX nr result

ID: Glycyrrhiza23_contig00015208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015208
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554160.1| PREDICTED: DNA helicase INO80-like isoform 2...    91   1e-16
ref|XP_003554159.1| PREDICTED: DNA helicase INO80-like isoform 1...    91   1e-16
ref|XP_003520510.1| PREDICTED: DNA helicase INO80-like [Glycine ...    90   2e-16
ref|XP_002323271.1| chromatin remodeling complex subunit [Populu...    79   3e-13
emb|CBI29799.3| unnamed protein product [Vitis vinifera]               79   4e-13

>ref|XP_003554160.1| PREDICTED: DNA helicase INO80-like isoform 2 [Glycine max]
          Length = 1542

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 41/54 (75%), Positives = 48/54 (88%)
 Frame = +3

Query: 69  HRTKPKDSPSYSSLFNLQSLMNFQLPEQDDDFDYYGNSSQDESRDNQGGAIASN 230
           HR K KDS SYS+LFNL+ LMNFQLP+QDDDFDYYGNSSQDESRD++GG I ++
Sbjct: 3   HRPKSKDSLSYSTLFNLEPLMNFQLPKQDDDFDYYGNSSQDESRDSEGGGITNH 56


>ref|XP_003554159.1| PREDICTED: DNA helicase INO80-like isoform 1 [Glycine max]
          Length = 1531

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 41/54 (75%), Positives = 48/54 (88%)
 Frame = +3

Query: 69  HRTKPKDSPSYSSLFNLQSLMNFQLPEQDDDFDYYGNSSQDESRDNQGGAIASN 230
           HR K KDS SYS+LFNL+ LMNFQLP+QDDDFDYYGNSSQDESRD++GG I ++
Sbjct: 3   HRPKSKDSLSYSTLFNLEPLMNFQLPKQDDDFDYYGNSSQDESRDSEGGGITNH 56


>ref|XP_003520510.1| PREDICTED: DNA helicase INO80-like [Glycine max]
          Length = 1543

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/54 (77%), Positives = 49/54 (90%)
 Frame = +3

Query: 69  HRTKPKDSPSYSSLFNLQSLMNFQLPEQDDDFDYYGNSSQDESRDNQGGAIASN 230
           HR K K+S SYS+LFNL+SLMNFQLPEQD+DFDYYGNSSQDESRD+QG  IA++
Sbjct: 3   HRPKSKESLSYSTLFNLESLMNFQLPEQDNDFDYYGNSSQDESRDSQGVGIANH 56


>ref|XP_002323271.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222867901|gb|EEF05032.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1540

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 35/52 (67%), Positives = 47/52 (90%)
 Frame = +3

Query: 69  HRTKPKDSPSYSSLFNLQSLMNFQLPEQDDDFDYYGNSSQDESRDNQGGAIA 224
           +R + KDS SYS+LFNL+SL+NF++P+ DD+FDYYGNSSQDESR +QGGA++
Sbjct: 3   NRRQAKDSLSYSNLFNLESLVNFRVPQPDDEFDYYGNSSQDESRGSQGGAMS 54


>emb|CBI29799.3| unnamed protein product [Vitis vinifera]
          Length = 1557

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 35/47 (74%), Positives = 42/47 (89%)
 Frame = +3

Query: 81  PKDSPSYSSLFNLQSLMNFQLPEQDDDFDYYGNSSQDESRDNQGGAI 221
           P +  S+S+LFNL+SLMNFQLP+QDDDFDYYGNSSQDESR +QGG +
Sbjct: 7   PNNGFSFSNLFNLESLMNFQLPQQDDDFDYYGNSSQDESRGSQGGTM 53


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