BLASTX nr result

ID: Glycyrrhiza23_contig00015177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015177
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517627.1| PREDICTED: vacuolar protein sorting-associat...    69   1e-12
ref|XP_003529072.1| PREDICTED: vacuolar protein sorting-associat...    65   8e-09
ref|XP_002514179.1| Charged multivesicular body protein 4b, puta...    61   1e-07
ref|XP_002308308.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
gb|AFK48250.1| unknown [Lotus japonicus]                               60   2e-07

>ref|XP_003517627.1| PREDICTED: vacuolar protein sorting-associated protein 32 homolog
           2-like [Glycine max]
          Length = 329

 Score = 68.6 bits (166), Expect(2) = 1e-12
 Identities = 36/43 (83%), Positives = 38/43 (88%), Gaps = 4/43 (9%)
 Frame = -3

Query: 118 GFQ----YIGIMFSRVFGKPKQETNAVATLDKLNETLEMLEKK 2
           GFQ    +I IMFSR+FGKPKQETNAVATLDKLNETLEMLEKK
Sbjct: 101 GFQSIASHITIMFSRMFGKPKQETNAVATLDKLNETLEMLEKK 143



 Score = 28.9 bits (63), Expect(2) = 1e-12
 Identities = 19/44 (43%), Positives = 23/44 (52%)
 Frame = -2

Query: 314 SSPLPSNLGHQNNTPKRAIPTPSLFPFAFSTLPRSQFLIFRFSS 183
           S P PS L  + N+ +     PSL  F  ST  RSQ LIF  S+
Sbjct: 35  SIPFPSFLALKTNSFQLNPSKPSLSIFVLSTFLRSQSLIFLSSN 78


>ref|XP_003529072.1| PREDICTED: vacuolar protein sorting-associated protein 32 homolog
          2-like [Glycine max]
          Length = 218

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 31/32 (96%), Positives = 32/32 (100%)
 Frame = -3

Query: 97 MFSRVFGKPKQETNAVATLDKLNETLEMLEKK 2
          MFSR+FGKPKQETNAVATLDKLNETLEMLEKK
Sbjct: 1  MFSRMFGKPKQETNAVATLDKLNETLEMLEKK 32


>ref|XP_002514179.1| Charged multivesicular body protein 4b, putative [Ricinus
          communis] gi|223546635|gb|EEF48133.1| Charged
          multivesicular body protein 4b, putative [Ricinus
          communis]
          Length = 218

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = -3

Query: 97 MFSRVFGKPKQETNAVATLDKLNETLEMLEKK 2
          MF+R+FGKPKQETNA+ TLDKLNETLEMLEKK
Sbjct: 1  MFNRLFGKPKQETNALTTLDKLNETLEMLEKK 32


>ref|XP_002308308.1| predicted protein [Populus trichocarpa]
          gi|222854284|gb|EEE91831.1| predicted protein [Populus
          trichocarpa]
          Length = 252

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = -3

Query: 97 MFSRVFGKPKQETNAVATLDKLNETLEMLEKK 2
          MF+R+FGKPKQETNA+ TLDKLNETLEMLEKK
Sbjct: 1  MFNRLFGKPKQETNALTTLDKLNETLEMLEKK 32


>gb|AFK48250.1| unknown [Lotus japonicus]
          Length = 218

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/32 (84%), Positives = 31/32 (96%)
 Frame = -3

Query: 97 MFSRVFGKPKQETNAVATLDKLNETLEMLEKK 2
          MF+R+FGKPKQE NA+ATLDKLNETL+MLEKK
Sbjct: 1  MFTRIFGKPKQEANALATLDKLNETLDMLEKK 32


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