BLASTX nr result

ID: Glycyrrhiza23_contig00015155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015155
         (980 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610842.1| Cyclic nucleotide gated channel [Medicago tr...   362   6e-98
ref|XP_003534112.1| PREDICTED: probable cyclic nucleotide-gated ...   343   4e-92
ref|XP_003548317.1| PREDICTED: probable cyclic nucleotide-gated ...   339   5e-91
ref|XP_003548315.1| PREDICTED: probable cyclic nucleotide-gated ...   338   1e-90
ref|XP_003534111.1| PREDICTED: probable cyclic nucleotide-gated ...   336   4e-90

>ref|XP_003610842.1| Cyclic nucleotide gated channel [Medicago truncatula]
            gi|355512177|gb|AES93800.1| Cyclic nucleotide gated
            channel [Medicago truncatula]
          Length = 742

 Score =  362 bits (930), Expect = 6e-98
 Identities = 182/286 (63%), Positives = 213/286 (74%), Gaps = 4/286 (1%)
 Frame = -1

Query: 980  PLPQIIMWCVLQHSLGSTGANYGKNVLRLGILIQYLPRLFKFLPLVVGLSPTGFIFESAW 801
            P+PQI++  +L +SLGS+GANY KN+LRLGIL+QY+PRLF+FLPL++G SPTGFIFESAW
Sbjct: 282  PIPQIMIMFILPNSLGSSGANYAKNLLRLGILVQYIPRLFRFLPLLIGQSPTGFIFESAW 341

Query: 800  ANVVINLLIFMLSGHVIGSCWYLFGLQRVNHCLRDACHRSNLPSCMELIDCKLPPFNWSN 621
            AN +INLLIFMLSGHV+GSCWYLFGLQRVN CLRDAC  +NL  CMELIDC      W N
Sbjct: 342  ANFIINLLIFMLSGHVVGSCWYLFGLQRVNQCLRDACRNANLTGCMELIDCN-SNATWRN 400

Query: 620  NAGAIACLNSTSGAFSYGIYANAVPFTTETNVVKKYVYALFWGFQQISTLAGSQTPSNFV 441
            + GA  CLNS+SG FSYGIYANAVP T ET V+ KYVYALFWGFQQIST+AG+Q PS FV
Sbjct: 401  DKGANDCLNSSSGVFSYGIYANAVPLTIETRVISKYVYALFWGFQQISTMAGNQVPSYFV 460

Query: 440  SEVVFTMVXXXXXXXXXXXXXGNVQNFLQGLGRRRLDMQLRRHDVEKWMXXXXXXXXXXX 261
             EV+FTM              GN+QNFLQ LGRRR++MQLR  DVE+WM           
Sbjct: 461  WEVLFTMSIIGLGLLLYALLIGNIQNFLQALGRRRVEMQLRGRDVEQWMSHRRLPEDLKR 520

Query: 260  XXRQAERSNWAATRGVTQ----ETVPEDLQTEIRRHLSKRSQSVSL 135
              R+AER  WAATRGV +    E +PEDLQ +IRRHL K  + V +
Sbjct: 521  RVREAERYTWAATRGVPEEMALENLPEDLQKDIRRHLFKFVKKVRI 566


>ref|XP_003534112.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
            chloroplastic-like [Glycine max]
          Length = 766

 Score =  343 bits (880), Expect = 4e-92
 Identities = 176/295 (59%), Positives = 207/295 (70%), Gaps = 13/295 (4%)
 Frame = -1

Query: 980  PLPQIIMWCVLQHSLGSTGANYGKNVLRLGILIQYLPRLFKFLPLVVGLSPTGFIFESAW 801
            PLPQI++  VL +SL   GANY KN+LR  IL+QY+P+LF+FLPL++G SPTGFIFESAW
Sbjct: 306  PLPQIMILFVLPNSL--EGANYAKNLLRAAILVQYIPKLFRFLPLLIGQSPTGFIFESAW 363

Query: 800  ANVVINLLIFMLSGHVIGSCWYLFGLQRVNHCLRDACHRSNLPSCMELIDC--------- 648
            AN +INLLIFML+ HV+GSCWYLFGLQRVN CLRDACH SN+P CM+ IDC         
Sbjct: 364  ANFIINLLIFMLASHVVGSCWYLFGLQRVNQCLRDACHSSNIPGCMKFIDCGRGHGKNQP 423

Query: 647  KLPPFNWSNNAGAIACLNSTSGAFSYGIYANAVPFTTETNVVKKYVYALFWGFQQISTLA 468
             L    W NN  A+ACL+ +   FSYGIY NAVP T ETN+V KYVY+LFWGFQQISTLA
Sbjct: 424  SLRSDQWINNTDAVACLDPSPDGFSYGIYENAVPLTIETNIVNKYVYSLFWGFQQISTLA 483

Query: 467  GSQTPSNFVSEVVFTMVXXXXXXXXXXXXXGNVQNFLQGLGRRRLDMQLRRHDVEKWMXX 288
            G+  PS FV EV+FTM              GN+QNFLQ LGRR+L+MQLR  DVE+WM  
Sbjct: 484  GNLEPSYFVWEVLFTMAIIGMGLLLFAILIGNIQNFLQALGRRKLEMQLRGRDVEQWMSH 543

Query: 287  XXXXXXXXXXXRQAERSNWAATRGVTQ----ETVPEDLQTEIRRHLSKRSQSVSL 135
                       RQAER NWAATRGV +    E +PEDLQ +IRRHL K  + + L
Sbjct: 544  RRLPEDLRRRVRQAERYNWAATRGVNEEMLMENLPEDLQRDIRRHLFKFVKKIRL 598


>ref|XP_003548317.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
            chloroplastic-like [Glycine max]
          Length = 766

 Score =  339 bits (870), Expect = 5e-91
 Identities = 176/295 (59%), Positives = 207/295 (70%), Gaps = 13/295 (4%)
 Frame = -1

Query: 980  PLPQIIMWCVLQHSLGSTGANYGKNVLRLGILIQYLPRLFKFLPLVVGLSPTGFIFESAW 801
            PLPQI++  VL +SL   GANY KN+LR  IL+QY+P+LF+FLPL++G SP GFIFESAW
Sbjct: 306  PLPQIMILFVLPNSL--EGANYAKNLLRAAILVQYIPKLFRFLPLLIGQSPMGFIFESAW 363

Query: 800  ANVVINLLIFMLSGHVIGSCWYLFGLQRVNHCLRDACHRSNLPSCMELIDCK-------- 645
            AN VINLLIF+L+ HV+GSCWYLFGLQRVN CLRDACH SN+P CM+ IDC         
Sbjct: 364  ANFVINLLIFVLASHVVGSCWYLFGLQRVNQCLRDACHSSNIPECMKFIDCGRGHGNNQP 423

Query: 644  -LPPFNWSNNAGAIACLNSTSGAFSYGIYANAVPFTTETNVVKKYVYALFWGFQQISTLA 468
             L    W NN  A+ACL+ +   FSYGIY NAVP T ETNVVKKYVY+LFWGFQQISTLA
Sbjct: 424  GLRSDQWINNTQAVACLDPSPDGFSYGIYENAVPLTIETNVVKKYVYSLFWGFQQISTLA 483

Query: 467  GSQTPSNFVSEVVFTMVXXXXXXXXXXXXXGNVQNFLQGLGRRRLDMQLRRHDVEKWMXX 288
            G+  PS FV EV+FTM              GN+QNFLQ LGRR+L+MQLR  DVE+WM  
Sbjct: 484  GNLEPSYFVWEVLFTMAIIGMGLLLFAILIGNIQNFLQALGRRKLEMQLRGRDVEQWMSH 543

Query: 287  XXXXXXXXXXXRQAERSNWAATRGVTQ----ETVPEDLQTEIRRHLSKRSQSVSL 135
                       R+AER NWAATRGV +    E +PEDLQ +IRRHL K  + + L
Sbjct: 544  RRLPEDLRRRVRRAERYNWAATRGVNEEMLMENLPEDLQRDIRRHLFKFVKKIRL 598


>ref|XP_003548315.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
            chloroplastic-like [Glycine max]
          Length = 772

 Score =  338 bits (867), Expect = 1e-90
 Identities = 177/293 (60%), Positives = 204/293 (69%), Gaps = 11/293 (3%)
 Frame = -1

Query: 980  PLPQIIMWCVLQHSLGSTGANYGKNVLRLGILIQYLPRLFKFLPLVVGLSPTGFIFESAW 801
            PLPQI++  VL   LG +GANY KN+LR  IL+QY PRLF+FLPL++G SPTGFIFESAW
Sbjct: 307  PLPQIMILFVLPKYLGLSGANYAKNLLRAAILVQYFPRLFRFLPLLIGQSPTGFIFESAW 366

Query: 800  ANVVINLLIFMLSGHVIGSCWYLFGLQRVNHCLRDACHRSNLPSCMELIDCKLPPFN--- 630
            AN +INLLIFMLSGHV+GS WYLFGLQRVN CLR+AC  SN+  C   IDC     +   
Sbjct: 367  ANFIINLLIFMLSGHVVGSGWYLFGLQRVNQCLRNACRDSNITGCSAFIDCGYGADDVSG 426

Query: 629  ----WSNNAGAIACLNSTSGAFSYGIYANAVPFTTETNVVKKYVYALFWGFQQISTLAGS 462
                W+NN  A ACLNS+S AF YGIY NAVP T ET VV KYV+ALFWGFQQISTLAG+
Sbjct: 427  RAEVWNNNVNATACLNSSSDAFKYGIYVNAVPLTIETRVVHKYVFALFWGFQQISTLAGN 486

Query: 461  QTPSNFVSEVVFTMVXXXXXXXXXXXXXGNVQNFLQGLGRRRLDMQLRRHDVEKWMXXXX 282
            QTPS FV EV+FTM              GN+QNFLQ LGRRRL+MQLR  DVE+WM    
Sbjct: 487  QTPSYFVWEVLFTMAIIGLGLLLFALLIGNIQNFLQALGRRRLEMQLRGRDVEQWMSHRR 546

Query: 281  XXXXXXXXXRQAERSNWAATRGVTQ----ETVPEDLQTEIRRHLSKRSQSVSL 135
                     R AER +WAATRGV +    E + EDLQT+IRRHL K  + V +
Sbjct: 547  LPEDLRRRVRHAERYSWAATRGVNEEILLENMQEDLQTDIRRHLFKFVKKVRI 599


>ref|XP_003534111.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
            chloroplastic-like [Glycine max]
          Length = 770

 Score =  336 bits (862), Expect = 4e-90
 Identities = 174/291 (59%), Positives = 205/291 (70%), Gaps = 9/291 (3%)
 Frame = -1

Query: 980  PLPQIIMWCVLQHSLGSTGANYGKNVLRLGILIQYLPRLFKFLPLVVGLSPTGFIFESAW 801
            PLPQI++  VL+  +G +GAN+ KN+LR  IL+QY PRLF+FLPL++G SPTGFIFESAW
Sbjct: 307  PLPQIMISFVLRKYMGISGANFAKNLLRAAILLQYFPRLFRFLPLLIGQSPTGFIFESAW 366

Query: 800  ANVVINLLIFMLSGHVIGSCWYLFGLQRVNHCLRDACHRSNLPSCMELIDCKLPPFN--- 630
            AN +INLL FMLSGHV+GS WYLFGLQRVN CLR AC  SN+  C   IDC     +   
Sbjct: 367  ANFIINLLFFMLSGHVVGSGWYLFGLQRVNQCLRKACQHSNITGCSAFIDCGSDRASDQS 426

Query: 629  --WSNNAGAIACLNSTSGAFSYGIYANAVPFTTETNVVKKYVYALFWGFQQISTLAGSQT 456
              W+ N  A ACL+S+SGAF YGIY +AVP T ET VVKKYV+ALFWGFQQISTLAG+QT
Sbjct: 427  ELWNKNVNATACLDSSSGAFPYGIYVHAVPLTIETRVVKKYVFALFWGFQQISTLAGNQT 486

Query: 455  PSNFVSEVVFTMVXXXXXXXXXXXXXGNVQNFLQGLGRRRLDMQLRRHDVEKWMXXXXXX 276
            PS F  EV+FTM              GN+QNFLQ LGRRRL+MQLR  DVE+WM      
Sbjct: 487  PSYFEWEVLFTMAIIGLGLLLFALLIGNIQNFLQALGRRRLEMQLRGRDVEQWMSHRRLP 546

Query: 275  XXXXXXXRQAERSNWAATRGVTQ----ETVPEDLQTEIRRHLSKRSQSVSL 135
                   RQAER +WAATRGV +    E +PEDLQT+IRRHL K  + V +
Sbjct: 547  EDLRRRVRQAERYSWAATRGVNEEILLENLPEDLQTDIRRHLFKFVKKVRI 597


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