BLASTX nr result

ID: Glycyrrhiza23_contig00015152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015152
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627563.1| ATP-dependent helicase BRM [Medicago truncat...   210   1e-52
ref|XP_003548671.1| PREDICTED: ATP-dependent helicase BRM-like [...   199   1e-49
ref|XP_003528847.1| PREDICTED: ATP-dependent helicase BRM-like [...   194   6e-48
ref|XP_003534554.1| PREDICTED: ATP-dependent helicase BRM-like [...   190   9e-47
ref|XP_003552402.1| PREDICTED: ATP-dependent helicase BRM-like [...   186   1e-45

>ref|XP_003627563.1| ATP-dependent helicase BRM [Medicago truncatula]
           gi|355521585|gb|AET02039.1| ATP-dependent helicase BRM
           [Medicago truncatula]
          Length = 2175

 Score =  210 bits (534), Expect = 1e-52
 Identities = 118/173 (68%), Positives = 126/173 (72%), Gaps = 8/173 (4%)
 Frame = +2

Query: 2   SRQSFQQQLLRKPEGNEAFLAYQAGRQGVFGSNNFXXXXXXXXXXXXRKFIDLAQHGSNQ 181
           SRQSFQQQLLRKPEGNEAFLAYQAGRQGVFGSNNF             KF++LAQHGSNQ
Sbjct: 60  SRQSFQQQLLRKPEGNEAFLAYQAGRQGVFGSNNFQQPNAMQLPQQSGKFVNLAQHGSNQ 119

Query: 182 DTHLRGHGSE-QQMPNSVHXXXXXXXXXXXXXK-PALGIHSQQQTKMGMISPASLKDQEM 355
           D  LRG GSE QQM N V              K PALGIHSQQQ KMGM++PAS+KDQEM
Sbjct: 120 DGQLRGQGSEQQQMINPVQQAYLQYAFQAAQQKQPALGIHSQQQAKMGMLNPASVKDQEM 179

Query: 356 RMGNLK------MQAVNQAQGSSSKNSSEHIARGEKQMEQGQQMAPDQKSEGK 496
           RMGNLK      MQAVNQAQGSSS+NSSEH ARGEKQMEQGQQ+ P Q  E +
Sbjct: 180 RMGNLKMQEAMSMQAVNQAQGSSSRNSSEHNARGEKQMEQGQQIRPIQAPEAQ 232


>ref|XP_003548671.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2229

 Score =  199 bits (507), Expect = 1e-49
 Identities = 112/171 (65%), Positives = 118/171 (69%), Gaps = 6/171 (3%)
 Frame = +2

Query: 2   SRQSFQQQLLRKPEGNEAFLAYQAGRQGVFGSNNFXXXXXXXXXXXXRKFIDLAQHGSNQ 181
           SRQSFQQQLLRKPEGNEAFLAYQAG QGVFGSNNF            RK       GSNQ
Sbjct: 57  SRQSFQQQLLRKPEGNEAFLAYQAGIQGVFGSNNFSSPSAMQLPQQPRKL----HLGSNQ 112

Query: 182 DTHLRGHGSEQQMPNSVHXXXXXXXXXXXXXKPALGIHSQQQTKMGMISPASLKDQEMRM 361
           D  LRG G EQQM N VH             +P LGI SQQQTKMGM+S ASL+DQEMRM
Sbjct: 113 DIQLRGQGVEQQMLNPVHQAYLQYALHAAQQRPTLGIQSQQQTKMGMLSSASLQDQEMRM 172

Query: 362 GNLK------MQAVNQAQGSSSKNSSEHIARGEKQMEQGQQMAPDQKSEGK 496
           GNLK      MQA NQ QGSSS+NSSE  ARG+KQM+QGQQM PDQKSEGK
Sbjct: 173 GNLKMQDIMSMQAANQGQGSSSRNSSERGARGDKQMDQGQQMTPDQKSEGK 223


>ref|XP_003528847.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2226

 Score =  194 bits (493), Expect = 6e-48
 Identities = 110/171 (64%), Positives = 118/171 (69%), Gaps = 6/171 (3%)
 Frame = +2

Query: 2   SRQSFQQQLLRKPEGNEAFLAYQAGRQGVFGSNNFXXXXXXXXXXXXRKFIDLAQHGSNQ 181
           SRQSFQQQLLRKPEGNEAFLAYQAG QGVFG+NNF            RK       GSNQ
Sbjct: 56  SRQSFQQQLLRKPEGNEAFLAYQAGIQGVFGNNNFSSPSAMQLPQQPRKL----HLGSNQ 111

Query: 182 DTHLRGHGSEQQMPNSVHXXXXXXXXXXXXXKPALGIHSQQQTKMGMISPASLKDQEMRM 361
           DTH RG G EQQ  N VH             +P LGI SQQ TK GM+S ASLKDQEMRM
Sbjct: 112 DTHQRGQGIEQQTLNPVHQAYLQYALHAQQ-RPTLGIQSQQHTKTGMLSSASLKDQEMRM 170

Query: 362 GNLKMQ------AVNQAQGSSSKNSSEHIARGEKQMEQGQQMAPDQKSEGK 496
           G+LKMQ      A NQ QGSSS+NSSE +ARG+KQMEQGQQ+APDQKSEGK
Sbjct: 171 GHLKMQDIMSMQAANQGQGSSSRNSSERVARGDKQMEQGQQIAPDQKSEGK 221


>ref|XP_003534554.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2222

 Score =  190 bits (483), Expect = 9e-47
 Identities = 108/170 (63%), Positives = 118/170 (69%), Gaps = 6/170 (3%)
 Frame = +2

Query: 2   SRQSFQQQLLRKPEGNEAFLAYQAGRQGVFGSNNFXXXXXXXXXXXXRKFIDLAQHGSNQ 181
           SRQSFQQQLLRKPEG+EAFLAYQAG QGVFGSNNF            RKF+DLAQHGSNQ
Sbjct: 57  SRQSFQQQLLRKPEGSEAFLAYQAGLQGVFGSNNF-PSSSMQLPQQSRKFVDLAQHGSNQ 115

Query: 182 DTHLRGHGSEQQMPNSVHXXXXXXXXXXXXXKPALGIHSQQQTKMGMISPASLKDQEMRM 361
                  G EQQM N                K AL + SQQQ KMGM+ P+S+KDQEMRM
Sbjct: 116 I-----QGVEQQMLNPAQAAYFQYALQASQQKSALEMQSQQQPKMGMLGPSSVKDQEMRM 170

Query: 362 GNLKMQ------AVNQAQGSSSKNSSEHIARGEKQMEQGQQMAPDQKSEG 493
           GNLKMQ      AVNQAQ SSS+NSSEH  RGEK++EQGQQ+APDQKSEG
Sbjct: 171 GNLKMQDLMSMPAVNQAQASSSRNSSEHFTRGEKRVEQGQQLAPDQKSEG 220


>ref|XP_003552402.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2222

 Score =  186 bits (473), Expect = 1e-45
 Identities = 106/170 (62%), Positives = 117/170 (68%), Gaps = 6/170 (3%)
 Frame = +2

Query: 2   SRQSFQQQLLRKPEGNEAFLAYQAGRQGVFGSNNFXXXXXXXXXXXXRKFIDLAQHGSNQ 181
           SRQSFQQQLLRKPEG+EAFLAYQAG QGVFGSNNF            RKF+DLAQHGSNQ
Sbjct: 57  SRQSFQQQLLRKPEGSEAFLAYQAGLQGVFGSNNF-PSSSMQLPQQSRKFVDLAQHGSNQ 115

Query: 182 DTHLRGHGSEQQMPNSVHXXXXXXXXXXXXXKPALGIHSQQQTKMGMISPASLKDQEMRM 361
                  G EQQM N V              K AL + SQQQ K+GM+ P+S+KDQEMRM
Sbjct: 116 -----VQGVEQQMLNPVQAAYFQYALQASQQKSALAMQSQQQPKVGMLGPSSVKDQEMRM 170

Query: 362 GNLK------MQAVNQAQGSSSKNSSEHIARGEKQMEQGQQMAPDQKSEG 493
           GNLK      MQAVNQ Q SSS+NSSEH   GEK++EQGQQ+APDQKSEG
Sbjct: 171 GNLKMQDLMSMQAVNQVQASSSRNSSEHFTWGEKRVEQGQQLAPDQKSEG 220


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