BLASTX nr result

ID: Glycyrrhiza23_contig00015136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015136
         (1284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Me...   461   e-127
ref|XP_003605160.1| Pentatricopeptide repeat-containing protein ...   461   e-127
gb|ACU24432.1| unknown [Glycine max]                                  418   e-114
ref|XP_004136904.1| PREDICTED: hemK methyltransferase family mem...   390   e-106
gb|ADN34260.1| N6-DNA-methyltransferase [Cucumis melo subsp. melo]    387   e-105

>gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
            small; Tetratricopeptide-like helical [Medicago
            truncatula]
          Length = 971

 Score =  461 bits (1186), Expect = e-127
 Identities = 236/296 (79%), Positives = 259/296 (87%), Gaps = 7/296 (2%)
 Frame = -2

Query: 1040 HYECCFDIDQSNSEL*SIKVICISLPK*TTVKM-------ASYKDLSRTAQIRLLSSHEE 882
            HYE   DIDQS+S L  IK   + +    T+K+       AS+KDLS+TAQIRL+SSH E
Sbjct: 680  HYERRLDIDQSDSALELIKSSYLHI----TIKLNNSENGKASFKDLSKTAQIRLVSSHNE 735

Query: 881  VYEPCDDSFALVDALLADRANLLEHHPTLCMEIGCGSGYVITSLALILGQEGCGVNYIAT 702
            VYEPCDDSFALVDALLADR NLLEHHP LCMEIGCGSGYVITSLALILGQEG GVNYIAT
Sbjct: 736  VYEPCDDSFALVDALLADRTNLLEHHPALCMEIGCGSGYVITSLALILGQEGSGVNYIAT 795

Query: 701  DINPHAVRVTRETLEAHGVNAELIVTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGAE 522
            DINPHAV+VTRET+EAHGV+AELI+TDIASGLE RLAG++DVMVVNPPYVPTPE EVG+E
Sbjct: 796  DINPHAVKVTRETIEAHGVDAELIITDIASGLENRLAGMIDVMVVNPPYVPTPEAEVGSE 855

Query: 521  GITSSWAGGENGRSVIDRILPVADQLLSEKGWLYMVTLTANNPSEICLQMRKKGYASKIV 342
            GIT+SWAGGENGRSVIDRILPVAD LLSEKGWLYMVTLTANNPSEICL+MRKKGY SKIV
Sbjct: 856  GITASWAGGENGRSVIDRILPVADALLSEKGWLYMVTLTANNPSEICLEMRKKGYTSKIV 915

Query: 341  VQRSTEEESLHIIKFWRDLDTEVDEITDQSASGFMGSLLTQISLLSFWRGNNSDSK 174
            VQRSTEEESLHIIKFWRDLD  +DE   QS SGFMGSLL+Q+ L+S+ RGNNSD+K
Sbjct: 916  VQRSTEEESLHIIKFWRDLDNGLDE-NGQSTSGFMGSLLSQVPLISYLRGNNSDNK 970


>ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355506215|gb|AES87357.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1026

 Score =  461 bits (1186), Expect = e-127
 Identities = 236/296 (79%), Positives = 259/296 (87%), Gaps = 7/296 (2%)
 Frame = -2

Query: 1040 HYECCFDIDQSNSEL*SIKVICISLPK*TTVKM-------ASYKDLSRTAQIRLLSSHEE 882
            HYE   DIDQS+S L  IK   + +    T+K+       AS+KDLS+TAQIRL+SSH E
Sbjct: 735  HYERRLDIDQSDSALELIKSSYLHI----TIKLNNSENGKASFKDLSKTAQIRLVSSHNE 790

Query: 881  VYEPCDDSFALVDALLADRANLLEHHPTLCMEIGCGSGYVITSLALILGQEGCGVNYIAT 702
            VYEPCDDSFALVDALLADR NLLEHHP LCMEIGCGSGYVITSLALILGQEG GVNYIAT
Sbjct: 791  VYEPCDDSFALVDALLADRTNLLEHHPALCMEIGCGSGYVITSLALILGQEGSGVNYIAT 850

Query: 701  DINPHAVRVTRETLEAHGVNAELIVTDIASGLEKRLAGLVDVMVVNPPYVPTPEDEVGAE 522
            DINPHAV+VTRET+EAHGV+AELI+TDIASGLE RLAG++DVMVVNPPYVPTPE EVG+E
Sbjct: 851  DINPHAVKVTRETIEAHGVDAELIITDIASGLENRLAGMIDVMVVNPPYVPTPEAEVGSE 910

Query: 521  GITSSWAGGENGRSVIDRILPVADQLLSEKGWLYMVTLTANNPSEICLQMRKKGYASKIV 342
            GIT+SWAGGENGRSVIDRILPVAD LLSEKGWLYMVTLTANNPSEICL+MRKKGY SKIV
Sbjct: 911  GITASWAGGENGRSVIDRILPVADALLSEKGWLYMVTLTANNPSEICLEMRKKGYTSKIV 970

Query: 341  VQRSTEEESLHIIKFWRDLDTEVDEITDQSASGFMGSLLTQISLLSFWRGNNSDSK 174
            VQRSTEEESLHIIKFWRDLD  +DE   QS SGFMGSLL+Q+ L+S+ RGNNSD+K
Sbjct: 971  VQRSTEEESLHIIKFWRDLDNGLDE-NGQSTSGFMGSLLSQVPLISYLRGNNSDNK 1025


>gb|ACU24432.1| unknown [Glycine max]
          Length = 234

 Score =  418 bits (1075), Expect = e-114
 Identities = 210/234 (89%), Positives = 219/234 (93%)
 Frame = -2

Query: 944 MASYKDLSRTAQIRLLSSHEEVYEPCDDSFALVDALLADRANLLEHHPTLCMEIGCGSGY 765
           MAS+K+L RTAQI L+SSH+EVYEPCDDSFALVDALLADR NLLEHHPTLCMEIGCGSGY
Sbjct: 1   MASHKELPRTAQIHLVSSHQEVYEPCDDSFALVDALLADRNNLLEHHPTLCMEIGCGSGY 60

Query: 764 VITSLALILGQEGCGVNYIATDINPHAVRVTRETLEAHGVNAELIVTDIASGLEKRLAGL 585
           VITSLALILGQE CG+NYIATDINPHAVRVT ETLEAHGV AELIVTDIASGLE RLAGL
Sbjct: 61  VITSLALILGQEVCGINYIATDINPHAVRVTHETLEAHGVGAELIVTDIASGLEDRLAGL 120

Query: 584 VDVMVVNPPYVPTPEDEVGAEGITSSWAGGENGRSVIDRILPVADQLLSEKGWLYMVTLT 405
           VDVMVVNPPYVPTPEDEVG EGITSSWAGGENGRSVI++ILPVAD+LLSEKGWLYMVTLT
Sbjct: 121 VDVMVVNPPYVPTPEDEVGVEGITSSWAGGENGRSVINKILPVADRLLSEKGWLYMVTLT 180

Query: 404 ANNPSEICLQMRKKGYASKIVVQRSTEEESLHIIKFWRDLDTEVDEITDQSASG 243
            NNP EIC QMRKKGYASKIVVQRSTEEESLHIIKFWRD DTE +E TDQSA G
Sbjct: 181 ENNPFEICHQMRKKGYASKIVVQRSTEEESLHIIKFWRDFDTEANE-TDQSAFG 233


>ref|XP_004136904.1| PREDICTED: hemK methyltransferase family member 2-like [Cucumis
           sativus] gi|449529866|ref|XP_004171919.1| PREDICTED:
           hemK methyltransferase family member 2-like [Cucumis
           sativus]
          Length = 256

 Score =  390 bits (1001), Expect = e-106
 Identities = 191/252 (75%), Positives = 222/252 (88%), Gaps = 3/252 (1%)
 Frame = -2

Query: 920 RTAQIRLLSSHEEVYEPCDDSFALVDALLADRANLLEHHPTLCMEIGCGSGYVITSLALI 741
           RTAQI L+SSH EVYEPCDDSFALVDALLAD+  LL HHPTLC+E GCGSGYVITSLALI
Sbjct: 5   RTAQIPLVSSHREVYEPCDDSFALVDALLADQVKLLNHHPTLCLEFGCGSGYVITSLALI 64

Query: 740 LGQEGCGVNYIATDINPHAVRVTRETLEAHGVNAELIVTDIASGLEKRLAGLVDVMVVNP 561
           LG+E    +YIATDINPHA+RVT+ETLEAHG++AEL+ TDIASGLEKRLAG VDV+VVNP
Sbjct: 65  LGKEASATHYIATDINPHAIRVTQETLEAHGLHAELVCTDIASGLEKRLAGSVDVLVVNP 124

Query: 560 PYVPTPEDEVGAEGITSSWAGGENGRSVIDRILPVADQLLSEKGWLYMVTLTANNPSEIC 381
           PYVPTPEDEVG +GI S+WAGGENGRSVIDRILPVAD LLS+KGWLYMVTLTANNP++IC
Sbjct: 125 PYVPTPEDEVGQDGIASAWAGGENGRSVIDRILPVADVLLSDKGWLYMVTLTANNPAQIC 184

Query: 380 LQMRKKGYASKIVVQRSTEEESLHIIKFWRDLDTEVD--EITDQSASG-FMGSLLTQISL 210
           LQMR+KGYAS+IVVQRSTEEESLH+IKFW+D D +VD  + T ++  G  + SL++Q+  
Sbjct: 185 LQMREKGYASRIVVQRSTEEESLHVIKFWKDADLQVDGKDSTHKTGPGKVVESLISQLPR 244

Query: 209 LSFWRGNNSDSK 174
           LSFWR N++ S+
Sbjct: 245 LSFWRNNSNTSR 256


>gb|ADN34260.1| N6-DNA-methyltransferase [Cucumis melo subsp. melo]
          Length = 256

 Score =  387 bits (993), Expect = e-105
 Identities = 192/253 (75%), Positives = 222/253 (87%), Gaps = 3/253 (1%)
 Frame = -2

Query: 920 RTAQIRLLSSHEEVYEPCDDSFALVDALLADRANLLEHHPTLCMEIGCGSGYVITSLALI 741
           RTAQI L+SSH EVYEPCDDSFALVDALLADR  LL H+PTLC+E GCGSGYVITSLALI
Sbjct: 5   RTAQIHLVSSHREVYEPCDDSFALVDALLADRVKLLNHNPTLCLEFGCGSGYVITSLALI 64

Query: 740 LGQEGCGVNYIATDINPHAVRVTRETLEAHGVNAELIVTDIASGLEKRLAGLVDVMVVNP 561
           LG+E    +YIATDINPHA+RVT+ETLEAHG++AEL+ TD+ASGLEKRLAG VDV+VVNP
Sbjct: 65  LGKEASATHYIATDINPHAIRVTQETLEAHGLHAELVCTDLASGLEKRLAGSVDVLVVNP 124

Query: 560 PYVPTPEDEVGAEGITSSWAGGENGRSVIDRILPVADQLLSEKGWLYMVTLTANNPSEIC 381
           PYVPTPEDEVG +GI S+WAGGENGRSVIDRILPVAD LLS+KGWLYMVTLTANNP +IC
Sbjct: 125 PYVPTPEDEVGQDGIASAWAGGENGRSVIDRILPVADVLLSDKGWLYMVTLTANNPFQIC 184

Query: 380 LQMRKKGYASKIVVQRSTEEESLHIIKFWRDLDTEVD--EITDQSASG-FMGSLLTQISL 210
           LQMR+KGYAS+IVVQRSTEEESLH+IKFW+D D +VD  + T ++  G  + SL++Q+  
Sbjct: 185 LQMREKGYASRIVVQRSTEEESLHVIKFWKDADLQVDGKDSTHKTGPGRVVESLISQLPR 244

Query: 209 LSFWRGNNSDSKR 171
           LSFWR NNS++ R
Sbjct: 245 LSFWR-NNSNTNR 256


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