BLASTX nr result
ID: Glycyrrhiza23_contig00015111
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00015111 (740 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003550468.1| PREDICTED: sister chromatid cohesion protein... 106 6e-21 ref|XP_003529677.1| PREDICTED: sister chromatid cohesion protein... 96 1e-17 ref|XP_003637596.1| Sister chromatid cohesion protein PDS5-like ... 94 3e-17 ref|XP_003637595.1| Sister chromatid cohesion protein PDS5-like ... 94 3e-17 ref|XP_003534746.1| PREDICTED: sister chromatid cohesion protein... 81 2e-13 >ref|XP_003550468.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like [Glycine max] Length = 1642 Score = 106 bits (264), Expect = 6e-21 Identities = 54/74 (72%), Positives = 60/74 (81%), Gaps = 3/74 (4%) Frame = +1 Query: 1 ALRENVNGEEDSHSEGHQDNSDVGVDPREMEKSHIEPS-SP--DGGASIAEISDDTPLSK 171 ALR+N+NGEE+S SEGH DNSD G +PREMEKSH+EPS SP D +I EISDD PLSK Sbjct: 1569 ALRQNINGEEESDSEGHHDNSDAGSNPREMEKSHLEPSKSPHDDDNKTIPEISDDVPLSK 1628 Query: 172 WKRRTGKKSSGKTQ 213 WK RTGKKSSGK Q Sbjct: 1629 WKCRTGKKSSGKEQ 1642 >ref|XP_003529677.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like [Glycine max] Length = 1641 Score = 95.5 bits (236), Expect = 1e-17 Identities = 53/74 (71%), Positives = 56/74 (75%), Gaps = 3/74 (4%) Frame = +1 Query: 1 ALRENVNGEEDSHSEGHQDNSDVGVDPREMEKSHIEPS-SPDGGA--SIAEISDDTPLSK 171 ALREN+NG+E SEGH DNS PREMEKSHIEPS SPD +IAEISDD PLSK Sbjct: 1569 ALRENINGQEFD-SEGHHDNSKADRSPREMEKSHIEPSKSPDDDDDDTIAEISDDVPLSK 1627 Query: 172 WKRRTGKKSSGKTQ 213 WK RTGKKSSGK Q Sbjct: 1628 WKHRTGKKSSGKEQ 1641 >ref|XP_003637596.1| Sister chromatid cohesion protein PDS5-like protein [Medicago truncatula] gi|355503531|gb|AES84734.1| Sister chromatid cohesion protein PDS5-like protein [Medicago truncatula] Length = 992 Score = 94.0 bits (232), Expect = 3e-17 Identities = 48/69 (69%), Positives = 54/69 (78%) Frame = +1 Query: 7 RENVNGEEDSHSEGHQDNSDVGVDPREMEKSHIEPSSPDGGASIAEISDDTPLSKWKRRT 186 RE+V+GEE+S SEG QDNSDVG P E E+SHIEPSSPD SIAEISD+ PL KW R Sbjct: 925 RESVHGEEESESEGEQDNSDVGDSPGETERSHIEPSSPD-DVSIAEISDNIPLIKWNCRK 983 Query: 187 GKKSSGKTQ 213 GKKSSGK + Sbjct: 984 GKKSSGKVR 992 >ref|XP_003637595.1| Sister chromatid cohesion protein PDS5-like protein [Medicago truncatula] gi|355503530|gb|AES84733.1| Sister chromatid cohesion protein PDS5-like protein [Medicago truncatula] Length = 995 Score = 94.0 bits (232), Expect = 3e-17 Identities = 48/69 (69%), Positives = 54/69 (78%) Frame = +1 Query: 7 RENVNGEEDSHSEGHQDNSDVGVDPREMEKSHIEPSSPDGGASIAEISDDTPLSKWKRRT 186 RE+V+GEE+S SEG QDNSDVG P E E+SHIEPSSPD SIAEISD+ PL KW R Sbjct: 928 RESVHGEEESESEGEQDNSDVGDSPGETERSHIEPSSPD-DVSIAEISDNIPLIKWNCRK 986 Query: 187 GKKSSGKTQ 213 GKKSSGK + Sbjct: 987 GKKSSGKVR 995 >ref|XP_003534746.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like [Glycine max] Length = 1648 Score = 81.3 bits (199), Expect = 2e-13 Identities = 45/69 (65%), Positives = 54/69 (78%) Frame = +1 Query: 1 ALRENVNGEEDSHSEGHQDNSDVGVDPREMEKSHIEPSSPDGGASIAEISDDTPLSKWKR 180 AL EN NGEE S S G+Q++SD PRE+EKS IE +SPDG A IAE+SDD PLSKW+R Sbjct: 1580 ALGENDNGEE-SDSGGNQNDSDGESSPREVEKSPIESASPDG-AKIAEVSDDEPLSKWRR 1637 Query: 181 RTGKKSSGK 207 +GKKSSG+ Sbjct: 1638 PSGKKSSGQ 1646