BLASTX nr result

ID: Glycyrrhiza23_contig00015111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015111
         (740 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550468.1| PREDICTED: sister chromatid cohesion protein...   106   6e-21
ref|XP_003529677.1| PREDICTED: sister chromatid cohesion protein...    96   1e-17
ref|XP_003637596.1| Sister chromatid cohesion protein PDS5-like ...    94   3e-17
ref|XP_003637595.1| Sister chromatid cohesion protein PDS5-like ...    94   3e-17
ref|XP_003534746.1| PREDICTED: sister chromatid cohesion protein...    81   2e-13

>ref|XP_003550468.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
            [Glycine max]
          Length = 1642

 Score =  106 bits (264), Expect = 6e-21
 Identities = 54/74 (72%), Positives = 60/74 (81%), Gaps = 3/74 (4%)
 Frame = +1

Query: 1    ALRENVNGEEDSHSEGHQDNSDVGVDPREMEKSHIEPS-SP--DGGASIAEISDDTPLSK 171
            ALR+N+NGEE+S SEGH DNSD G +PREMEKSH+EPS SP  D   +I EISDD PLSK
Sbjct: 1569 ALRQNINGEEESDSEGHHDNSDAGSNPREMEKSHLEPSKSPHDDDNKTIPEISDDVPLSK 1628

Query: 172  WKRRTGKKSSGKTQ 213
            WK RTGKKSSGK Q
Sbjct: 1629 WKCRTGKKSSGKEQ 1642


>ref|XP_003529677.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
            [Glycine max]
          Length = 1641

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 53/74 (71%), Positives = 56/74 (75%), Gaps = 3/74 (4%)
 Frame = +1

Query: 1    ALRENVNGEEDSHSEGHQDNSDVGVDPREMEKSHIEPS-SPDGGA--SIAEISDDTPLSK 171
            ALREN+NG+E   SEGH DNS     PREMEKSHIEPS SPD     +IAEISDD PLSK
Sbjct: 1569 ALRENINGQEFD-SEGHHDNSKADRSPREMEKSHIEPSKSPDDDDDDTIAEISDDVPLSK 1627

Query: 172  WKRRTGKKSSGKTQ 213
            WK RTGKKSSGK Q
Sbjct: 1628 WKHRTGKKSSGKEQ 1641


>ref|XP_003637596.1| Sister chromatid cohesion protein PDS5-like protein [Medicago
            truncatula] gi|355503531|gb|AES84734.1| Sister chromatid
            cohesion protein PDS5-like protein [Medicago truncatula]
          Length = 992

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 48/69 (69%), Positives = 54/69 (78%)
 Frame = +1

Query: 7    RENVNGEEDSHSEGHQDNSDVGVDPREMEKSHIEPSSPDGGASIAEISDDTPLSKWKRRT 186
            RE+V+GEE+S SEG QDNSDVG  P E E+SHIEPSSPD   SIAEISD+ PL KW  R 
Sbjct: 925  RESVHGEEESESEGEQDNSDVGDSPGETERSHIEPSSPD-DVSIAEISDNIPLIKWNCRK 983

Query: 187  GKKSSGKTQ 213
            GKKSSGK +
Sbjct: 984  GKKSSGKVR 992


>ref|XP_003637595.1| Sister chromatid cohesion protein PDS5-like protein [Medicago
            truncatula] gi|355503530|gb|AES84733.1| Sister chromatid
            cohesion protein PDS5-like protein [Medicago truncatula]
          Length = 995

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 48/69 (69%), Positives = 54/69 (78%)
 Frame = +1

Query: 7    RENVNGEEDSHSEGHQDNSDVGVDPREMEKSHIEPSSPDGGASIAEISDDTPLSKWKRRT 186
            RE+V+GEE+S SEG QDNSDVG  P E E+SHIEPSSPD   SIAEISD+ PL KW  R 
Sbjct: 928  RESVHGEEESESEGEQDNSDVGDSPGETERSHIEPSSPD-DVSIAEISDNIPLIKWNCRK 986

Query: 187  GKKSSGKTQ 213
            GKKSSGK +
Sbjct: 987  GKKSSGKVR 995


>ref|XP_003534746.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
            [Glycine max]
          Length = 1648

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 45/69 (65%), Positives = 54/69 (78%)
 Frame = +1

Query: 1    ALRENVNGEEDSHSEGHQDNSDVGVDPREMEKSHIEPSSPDGGASIAEISDDTPLSKWKR 180
            AL EN NGEE S S G+Q++SD    PRE+EKS IE +SPDG A IAE+SDD PLSKW+R
Sbjct: 1580 ALGENDNGEE-SDSGGNQNDSDGESSPREVEKSPIESASPDG-AKIAEVSDDEPLSKWRR 1637

Query: 181  RTGKKSSGK 207
             +GKKSSG+
Sbjct: 1638 PSGKKSSGQ 1646


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