BLASTX nr result

ID: Glycyrrhiza23_contig00015101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015101
         (681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517404.1| PREDICTED: uncharacterized protein LOC100806...    97   2e-18
ref|XP_003611370.1| hypothetical protein MTR_5g013240 [Medicago ...    96   5e-18
ref|XP_002531781.1| conserved hypothetical protein [Ricinus comm...    86   7e-15
ref|XP_002326471.1| predicted protein [Populus trichocarpa] gi|2...    85   2e-14
ref|XP_002303375.1| predicted protein [Populus trichocarpa] gi|2...    81   2e-13

>ref|XP_003517404.1| PREDICTED: uncharacterized protein LOC100806047 [Glycine max]
           gi|255640632|gb|ACU20601.1| unknown [Glycine max]
          Length = 83

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 47/56 (83%), Positives = 53/56 (94%)
 Frame = +3

Query: 3   DMDTEQQHLPTYDPLSHVAQRELSRLRSAQKAVHLIPLLVLLCAIILWFFSSPTPS 170
           +MD++Q HLPTYDPLSHVAQR+LSRLRSAQ AVHLIPLLVLLCA+ILWFFS+PT S
Sbjct: 23  NMDSDQ-HLPTYDPLSHVAQRDLSRLRSAQNAVHLIPLLVLLCAVILWFFSAPTSS 77


>ref|XP_003611370.1| hypothetical protein MTR_5g013240 [Medicago truncatula]
           gi|355512705|gb|AES94328.1| hypothetical protein
           MTR_5g013240 [Medicago truncatula]
           gi|388492180|gb|AFK34156.1| unknown [Medicago
           truncatula]
          Length = 57

 Score = 96.3 bits (238), Expect = 5e-18
 Identities = 47/54 (87%), Positives = 51/54 (94%), Gaps = 1/54 (1%)
 Frame = +3

Query: 6   MDTEQQHL-PTYDPLSHVAQRELSRLRSAQKAVHLIPLLVLLCAIILWFFSSPT 164
           M+TEQQHL P YDPLSHVA++ELS +RSAQKAVHLIPLLVLLCAIILWFFSSPT
Sbjct: 1   METEQQHLLPAYDPLSHVAKKELSHIRSAQKAVHLIPLLVLLCAIILWFFSSPT 54


>ref|XP_002531781.1| conserved hypothetical protein [Ricinus communis]
           gi|223528574|gb|EEF30595.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 87

 Score = 85.9 bits (211), Expect = 7e-15
 Identities = 39/51 (76%), Positives = 46/51 (90%)
 Frame = +3

Query: 9   DTEQQHLPTYDPLSHVAQRELSRLRSAQKAVHLIPLLVLLCAIILWFFSSP 161
           D EQ  LPTYDPLSHVA++E SRLRSA+ A+HLIPL+++LCAIILWFFSSP
Sbjct: 28  DKEQLQLPTYDPLSHVAKKERSRLRSAENAIHLIPLVLVLCAIILWFFSSP 78


>ref|XP_002326471.1| predicted protein [Populus trichocarpa] gi|222833793|gb|EEE72270.1|
           predicted protein [Populus trichocarpa]
          Length = 76

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 39/54 (72%), Positives = 48/54 (88%), Gaps = 1/54 (1%)
 Frame = +3

Query: 9   DTEQQHLPTYDPLSHVAQRELSRLRSAQKAVHLIPLLVLLCAIILWFFS-SPTP 167
           DT+QQ LPTYDPLSH+ ++E SRLRSA+ A+H+IPLL++LCAIILWFFS SP P
Sbjct: 21  DTDQQELPTYDPLSHIGKKEKSRLRSAEYAIHVIPLLLVLCAIILWFFSNSPEP 74


>ref|XP_002303375.1| predicted protein [Populus trichocarpa] gi|222840807|gb|EEE78354.1|
           predicted protein [Populus trichocarpa]
          Length = 108

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 35/55 (63%), Positives = 46/55 (83%)
 Frame = +3

Query: 9   DTEQQHLPTYDPLSHVAQRELSRLRSAQKAVHLIPLLVLLCAIILWFFSSPTPSR 173
           D + Q LPTYDP SHVA++E SRLRSA+ A+H+IPL++ LCAI+LWFFS+P  S+
Sbjct: 21  DKDHQELPTYDPASHVAKKERSRLRSAENAIHVIPLVLALCAIVLWFFSTPLGSQ 75


Top