BLASTX nr result

ID: Glycyrrhiza23_contig00015099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015099
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605934.1| Exosome complex exonuclease RRP6 [Medicago t...   211   1e-52
ref|XP_003526329.1| PREDICTED: uncharacterized protein LOC100791...   192   3e-47
emb|CBI28799.3| unnamed protein product [Vitis vinifera]              163   3e-38
ref|XP_002268685.1| PREDICTED: uncharacterized protein LOC100261...   159   4e-37
ref|XP_004159228.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   146   3e-33

>ref|XP_003605934.1| Exosome complex exonuclease RRP6 [Medicago truncatula]
            gi|355506989|gb|AES88131.1| Exosome complex exonuclease
            RRP6 [Medicago truncatula]
          Length = 974

 Score =  211 bits (536), Expect = 1e-52
 Identities = 106/144 (73%), Positives = 120/144 (83%), Gaps = 2/144 (1%)
 Frame = +1

Query: 1    SDLAVEGATSNGNTILVKATDYN--ESSNSAVNVDNSLIRRQPNVVSDISYPPRDEESTQ 174
            SDLAV+ ATSNGNTI+VK TD++  E+S S V+ D SL + QPNVVSD     +DE++TQ
Sbjct: 832  SDLAVDKATSNGNTIVVKTTDHDDDETSYSLVDTDESLNKMQPNVVSD-EESIKDEDTTQ 890

Query: 175  AKHNSKLSLLGHGPHGKQVVEHLLKEYGEDGIGEFCQRWRQVFVDAVNPRFLPAGWDVKH 354
            AKH+SKLSLLGHGPHGKQVV+HLLKEYGEDGI EFCQRWRQVFVDA+ PRFLP GWDVKH
Sbjct: 891  AKHHSKLSLLGHGPHGKQVVDHLLKEYGEDGIREFCQRWRQVFVDALKPRFLPGGWDVKH 950

Query: 355  SGRRDFGEFSVYNPDRRAAAASTE 426
            SGRRDFGEFSVYN  +R  A S E
Sbjct: 951  SGRRDFGEFSVYNHQKRETADSME 974


>ref|XP_003526329.1| PREDICTED: uncharacterized protein LOC100791485 [Glycine max]
          Length = 873

 Score =  192 bits (489), Expect = 3e-47
 Identities = 98/135 (72%), Positives = 108/135 (80%), Gaps = 1/135 (0%)
 Frame = +1

Query: 22   ATSNGNTILVKATDYNESSNSAVNVDNS-LIRRQPNVVSDISYPPRDEESTQAKHNSKLS 198
            ATSN N I V+ TDYNESS+SA+NVD+S L  RQ N +S+              HNSKLS
Sbjct: 753  ATSNRNMITVETTDYNESSDSAINVDDSCLSSRQENGLSE--------------HNSKLS 798

Query: 199  LLGHGPHGKQVVEHLLKEYGEDGIGEFCQRWRQVFVDAVNPRFLPAGWDVKHSGRRDFGE 378
            LLGHGPHGK+VVE+LLKEYGEDGI  FCQRWRQVFVDAVNPRFLP GWDVKHSGRRDFG+
Sbjct: 799  LLGHGPHGKRVVEYLLKEYGEDGIRAFCQRWRQVFVDAVNPRFLPGGWDVKHSGRRDFGK 858

Query: 379  FSVYNPDRRAAAAST 423
            FSVYNPD+R AAAST
Sbjct: 859  FSVYNPDKRGAAAST 873


>emb|CBI28799.3| unnamed protein product [Vitis vinifera]
          Length = 935

 Score =  163 bits (412), Expect = 3e-38
 Identities = 78/138 (56%), Positives = 99/138 (71%), Gaps = 1/138 (0%)
 Frame = +1

Query: 4    DLAVEGATSNGNTILVKATDYNESSNSAV-NVDNSLIRRQPNVVSDISYPPRDEESTQAK 180
            ++ +E   S+ N +    ++ +E  +  V + DN   R Q     D+ YP +   +   K
Sbjct: 795  EITMEVLASDSNNLSSDRSETSEMKDMCVMDTDNCESRSQSEGTLDLFYP-KSNGNASPK 853

Query: 181  HNSKLSLLGHGPHGKQVVEHLLKEYGEDGIGEFCQRWRQVFVDAVNPRFLPAGWDVKHSG 360
            HN KLSLLGHGPHGK+VV+HLLKEYGEDGI +FCQRWRQ FV+A++PRFLPAGWDV HSG
Sbjct: 854  HNPKLSLLGHGPHGKEVVDHLLKEYGEDGIRQFCQRWRQTFVEAIHPRFLPAGWDVMHSG 913

Query: 361  RRDFGEFSVYNPDRRAAA 414
            RRDFGEFSVYNPD++A A
Sbjct: 914  RRDFGEFSVYNPDKKAFA 931


>ref|XP_002268685.1| PREDICTED: uncharacterized protein LOC100261955 [Vitis vinifera]
          Length = 936

 Score =  159 bits (402), Expect = 4e-37
 Identities = 73/109 (66%), Positives = 86/109 (78%)
 Frame = +1

Query: 88   VNVDNSLIRRQPNVVSDISYPPRDEESTQAKHNSKLSLLGHGPHGKQVVEHLLKEYGEDG 267
            ++ DN   R Q     D+ YP +   +   KHN KLSLLGHGPHGK+VV+HLLKEYGEDG
Sbjct: 775  MDTDNCESRSQSEGTLDLFYP-KSNGNASPKHNPKLSLLGHGPHGKEVVDHLLKEYGEDG 833

Query: 268  IGEFCQRWRQVFVDAVNPRFLPAGWDVKHSGRRDFGEFSVYNPDRRAAA 414
            I +FCQRWRQ FV+A++PRFLPAGWDV HSGRRDFGEFSVYNPD++A A
Sbjct: 834  IRQFCQRWRQTFVEAIHPRFLPAGWDVMHSGRRDFGEFSVYNPDKKAFA 882


>ref|XP_004159228.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101225221
            [Cucumis sativus]
          Length = 877

 Score =  146 bits (369), Expect = 3e-33
 Identities = 73/124 (58%), Positives = 86/124 (69%), Gaps = 11/124 (8%)
 Frame = +1

Query: 70   ESSNSAVNVDNSLIRRQP---NVVSDISYPPRD--------EESTQAKHNSKLSLLGHGP 216
            E  N A N+D S +         VS+   P  +         ++ Q K NSKLSLLGHGP
Sbjct: 746  EHQNGACNIDTSTVDSSSVGDGSVSETCVPGGEVSFSDNGYAKTAQPKFNSKLSLLGHGP 805

Query: 217  HGKQVVEHLLKEYGEDGIGEFCQRWRQVFVDAVNPRFLPAGWDVKHSGRRDFGEFSVYNP 396
            HGK VV++LLKEYGEDGI +FCQRWRQVFV A+ PRFLPAGWDV HSGRRDFGEFS+YNP
Sbjct: 806  HGKLVVDYLLKEYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSGRRDFGEFSLYNP 865

Query: 397  DRRA 408
             ++A
Sbjct: 866  KKKA 869


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