BLASTX nr result

ID: Glycyrrhiza23_contig00015078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015078
         (1587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636173.1| Elongator complex protein [Medicago truncatu...   560   e-157
ref|NP_001241905.1| uncharacterized protein LOC100799237 [Glycin...   504   e-149
ref|XP_003521057.1| PREDICTED: elongator complex protein 4-like ...   488   e-141
emb|CAN76747.1| hypothetical protein VITISV_011445 [Vitis vinifera]   498   e-138
ref|XP_002267851.2| PREDICTED: elongator complex protein 4-like ...   495   e-137

>ref|XP_003636173.1| Elongator complex protein [Medicago truncatula]
            gi|355502108|gb|AES83311.1| Elongator complex protein
            [Medicago truncatula]
          Length = 349

 Score =  560 bits (1443), Expect = e-157
 Identities = 286/344 (83%), Positives = 305/344 (88%)
 Frame = -3

Query: 1324 QNSGIKHGPNGTMFLSSGIPDLDKILGGGFSLGSLVMVMEDAEAPHHMLLLRNFMSQGLV 1145
            QNSG+KHGPNGT FLSSGIPDLDKILGGGFSLGSLVM+MEDAEAPHHMLLLRN MSQGLV
Sbjct: 21   QNSGLKHGPNGTTFLSSGIPDLDKILGGGFSLGSLVMIMEDAEAPHHMLLLRNLMSQGLV 80

Query: 1144 HKQPLLYASASSRDPKGFLGTLPAPGSSKEDKDKTRDLGHERDLRIAWQYKKYFGDPQLN 965
            HKQPLLYASAS RDPKGFLGTLPAP  +KEDK  ++DL +E+DLRIAWQYKKYFG     
Sbjct: 81   HKQPLLYASAS-RDPKGFLGTLPAPAPAKEDK--SQDLTNEKDLRIAWQYKKYFG----- 132

Query: 964  INSNNNGAQQDYCNDFDLRKPLDRQFFSGMNVDCVSIQDSPNLAALQDRCAGFLAQFSRN 785
                   AQ DYCN+FDLRKPLDR F+SGMNVDCVSIQDSPNLA+LQD+CA FL+QFSR+
Sbjct: 133  -------AQHDYCNEFDLRKPLDRHFYSGMNVDCVSIQDSPNLASLQDQCAKFLSQFSRS 185

Query: 784  ESSISSAGRIAIQSFCSPQCKYANMEWHMLSFIRSLKGMARSSNAVVVVTFPPSLLSPSC 605
            E++ISSAGRIAIQSFCSPQCKYANMEWHMLSFIRSLKGMARSSNAVVVVTFPPSL+SPSC
Sbjct: 186  EANISSAGRIAIQSFCSPQCKYANMEWHMLSFIRSLKGMARSSNAVVVVTFPPSLVSPSC 245

Query: 604  SKRLQHMADTLLSVRAIPDEDKEMAKLLTGYQDMVGLLNVHKVARLNTQVPVILEATTFS 425
            SKRLQHMADTLLSVRAIPDEDKEMAKLLTGYQDMVGLLN+HKVARLNTQVPVILEATTFS
Sbjct: 246  SKRLQHMADTLLSVRAIPDEDKEMAKLLTGYQDMVGLLNIHKVARLNTQVPVILEATTFS 305

Query: 424  IKLQKRRFLVLECLNQAPIDXXXXXXXXXXXXXXXSTKAGPLDF 293
            IKLQKRR+LVLECLNQAP+D               STKAG LDF
Sbjct: 306  IKLQKRRYLVLECLNQAPVDGSSGSSYNTSGSCSGSTKAGSLDF 349


>ref|NP_001241905.1| uncharacterized protein LOC100799237 [Glycine max]
            gi|255641986|gb|ACU21260.1| unknown [Glycine max]
          Length = 335

 Score =  504 bits (1297), Expect(2) = e-149
 Identities = 250/288 (86%), Positives = 266/288 (92%)
 Frame = -3

Query: 1324 QNSGIKHGPNGTMFLSSGIPDLDKILGGGFSLGSLVMVMEDAEAPHHMLLLRNFMSQGLV 1145
            QN G+KHGPNGTMF+SSGIPDLDKILGGGFSLGSLVMVMED EAPHHMLLLRNFMSQGLV
Sbjct: 21   QNHGLKHGPNGTMFISSGIPDLDKILGGGFSLGSLVMVMEDPEAPHHMLLLRNFMSQGLV 80

Query: 1144 HKQPLLYASASSRDPKGFLGTLPAPGSSKEDKDKTRDLGHERDLRIAWQYKKYFGDPQLN 965
             KQPLLYASAS RDPK FLGTLP+P S K D +K+ DL HE+DLRIAWQYKKYFG+PQLN
Sbjct: 81   QKQPLLYASAS-RDPKSFLGTLPSPASPKGD-NKSSDLSHEKDLRIAWQYKKYFGEPQLN 138

Query: 964  INSNNNGAQQDYCNDFDLRKPLDRQFFSGMNVDCVSIQDSPNLAALQDRCAGFLAQFSRN 785
            +N+NN G Q DYCNDFDLRKPLDR FFSG NVDCVSI+DSPNL ALQD CAGFLA+FSRN
Sbjct: 139  LNTNNGG-QHDYCNDFDLRKPLDRHFFSGNNVDCVSIKDSPNLTALQDCCAGFLAKFSRN 197

Query: 784  ESSISSAGRIAIQSFCSPQCKYANMEWHMLSFIRSLKGMARSSNAVVVVTFPPSLLSPSC 605
            E SISSAGRIAIQSFCSPQCKY+N EWHMLSFIRSLK MARSSNAV+VVTFPPSLL PSC
Sbjct: 198  EGSISSAGRIAIQSFCSPQCKYSNEEWHMLSFIRSLKSMARSSNAVIVVTFPPSLLPPSC 257

Query: 604  SKRLQHMADTLLSVRAIPDEDKEMAKLLTGYQDMVGLLNVHKVARLNT 461
            SKRLQHMADTLLSV+AIPDEDKE+AKLLTGYQDM+GLLNVHKVARLNT
Sbjct: 258  SKRLQHMADTLLSVKAIPDEDKELAKLLTGYQDMIGLLNVHKVARLNT 305



 Score = 51.6 bits (122), Expect(2) = e-149
 Identities = 24/30 (80%), Positives = 27/30 (90%)
 Frame = -2

Query: 461 TGTCDS*GHNILNKIAKT*IFGSRMSKSSP 372
           TG+CDS GHNIL+KIAKT +FG RMSKSSP
Sbjct: 305 TGSCDSGGHNILHKIAKTKVFGFRMSKSSP 334


>ref|XP_003521057.1| PREDICTED: elongator complex protein 4-like [Glycine max]
          Length = 334

 Score =  488 bits (1257), Expect(2) = e-141
 Identities = 243/287 (84%), Positives = 262/287 (91%)
 Frame = -3

Query: 1324 QNSGIKHGPNGTMFLSSGIPDLDKILGGGFSLGSLVMVMEDAEAPHHMLLLRNFMSQGLV 1145
            QN G+KHGPNGTMF+SSGIPDLDKILGGGFSLGSLVMVMED EAPHHMLLLRNFMSQGLV
Sbjct: 21   QNPGLKHGPNGTMFISSGIPDLDKILGGGFSLGSLVMVMEDPEAPHHMLLLRNFMSQGLV 80

Query: 1144 HKQPLLYASASSRDPKGFLGTLPAPGSSKEDKDKTRDLGHERDLRIAWQYKKYFGDPQLN 965
             KQPLLYASAS RDPK FLGTLP+  S K DK    DLG E+DLRIAWQYKKYFG+PQLN
Sbjct: 81   QKQPLLYASAS-RDPKSFLGTLPSLVSPKGDKSS--DLGQEKDLRIAWQYKKYFGEPQLN 137

Query: 964  INSNNNGAQQDYCNDFDLRKPLDRQFFSGMNVDCVSIQDSPNLAALQDRCAGFLAQFSRN 785
            +N+NN G   DYCNDFDLRKPLDR FFSG+NVDCVSI+DSPNL +LQDRCAGFLA+FSRN
Sbjct: 138  LNTNNGG-HHDYCNDFDLRKPLDRHFFSGINVDCVSIKDSPNLTSLQDRCAGFLAKFSRN 196

Query: 784  ESSISSAGRIAIQSFCSPQCKYANMEWHMLSFIRSLKGMARSSNAVVVVTFPPSLLSPSC 605
            E SISSAGRIAIQSFCSPQCKY+N EWHMLSFIRSLKG+ARSSNAV+VVTFPPSLLSPSC
Sbjct: 197  EGSISSAGRIAIQSFCSPQCKYSNEEWHMLSFIRSLKGLARSSNAVIVVTFPPSLLSPSC 256

Query: 604  SKRLQHMADTLLSVRAIPDEDKEMAKLLTGYQDMVGLLNVHKVARLN 464
            SKRLQHMADTLLSV+AIPDED+E+AKLLTGYQDM+GLLNV K+  LN
Sbjct: 257  SKRLQHMADTLLSVKAIPDEDQELAKLLTGYQDMIGLLNVTKLRGLN 303



 Score = 43.1 bits (100), Expect(2) = e-141
 Identities = 21/29 (72%), Positives = 23/29 (79%)
 Frame = -2

Query: 458 GTCDS*GHNILNKIAKT*IFGSRMSKSSP 372
           G+ DS  HNILNKI KT +FG RMSKSSP
Sbjct: 305 GSSDSGRHNILNKITKTEVFGFRMSKSSP 333


>emb|CAN76747.1| hypothetical protein VITISV_011445 [Vitis vinifera]
          Length = 363

 Score =  498 bits (1282), Expect = e-138
 Identities = 252/344 (73%), Positives = 282/344 (81%)
 Frame = -3

Query: 1324 QNSGIKHGPNGTMFLSSGIPDLDKILGGGFSLGSLVMVMEDAEAPHHMLLLRNFMSQGLV 1145
            Q  G+K GPNGT+FLSSGIPDLDKILGGGF LGSLVMVMED EAPHHMLLLRNFMSQGLV
Sbjct: 22   QAPGLKSGPNGTIFLSSGIPDLDKILGGGFPLGSLVMVMEDTEAPHHMLLLRNFMSQGLV 81

Query: 1144 HKQPLLYASASSRDPKGFLGTLPAPGSSKEDKDKTRDLGHERDLRIAWQYKKYFGDPQLN 965
            H QPLLYAS S +DP+ FLGTLP+P  SK+D+   RD   E+ LRIAWQYKKYFG+ Q N
Sbjct: 82   HNQPLLYASPS-KDPRAFLGTLPSPVLSKDDRSHNRDPEQEKGLRIAWQYKKYFGEHQPN 140

Query: 964  INSNNNGAQQDYCNDFDLRKPLDRQFFSGMNVDCVSIQDSPNLAALQDRCAGFLAQFSRN 785
             +S+ +  + +YCNDFDLRKPL+R F +  N+ C+SIQD PNLAA +D CA FLAQFSRN
Sbjct: 141  FDSHRD-TKHEYCNDFDLRKPLERXFLTAQNICCLSIQDPPNLAAXRDCCAKFLAQFSRN 199

Query: 784  ESSISSAGRIAIQSFCSPQCKYANMEWHMLSFIRSLKGMARSSNAVVVVTFPPSLLSPSC 605
             SSIS AGR+AIQSFC+PQC+Y+NMEW MLSFIRSLKGM R  NAV V+TFPPSLLSPS 
Sbjct: 200  NSSISCAGRVAIQSFCAPQCEYSNMEWDMLSFIRSLKGMIRDLNAVAVITFPPSLLSPSS 259

Query: 604  SKRLQHMADTLLSVRAIPDEDKEMAKLLTGYQDMVGLLNVHKVARLNTQVPVILEATTFS 425
            SKR QH+ADTLLSV+AIPDEDKE+A LLTGYQDMVGLLNVHKVA +NTQVPVILEATTFS
Sbjct: 260  SKRWQHIADTLLSVKAIPDEDKELANLLTGYQDMVGLLNVHKVANVNTQVPVILEATTFS 319

Query: 424  IKLQKRRFLVLECLNQAPIDXXXXXXXXXXXXXXXSTKAGPLDF 293
            IKLQKRR+LVLECLNQAP+D               STK G LDF
Sbjct: 320  IKLQKRRYLVLECLNQAPVDGSSGSSYASTGSCSGSTKTGTLDF 363


>ref|XP_002267851.2| PREDICTED: elongator complex protein 4-like [Vitis vinifera]
          Length = 361

 Score =  495 bits (1274), Expect = e-137
 Identities = 252/344 (73%), Positives = 283/344 (82%)
 Frame = -3

Query: 1324 QNSGIKHGPNGTMFLSSGIPDLDKILGGGFSLGSLVMVMEDAEAPHHMLLLRNFMSQGLV 1145
            Q  G+K GPNGT+FLSSGIPDLDKILGGGF LGSLVMVMED EAPHHMLLLRNFMSQGLV
Sbjct: 22   QAPGLKSGPNGTIFLSSGIPDLDKILGGGFPLGSLVMVMEDTEAPHHMLLLRNFMSQGLV 81

Query: 1144 HKQPLLYASASSRDPKGFLGTLPAPGSSKEDKDKTRDLGHERDLRIAWQYKKYFGDPQLN 965
            H QPLLYAS S +DP+ FLGTLP+P  SK+D+   RD   E+ LRIAWQYKKYFG+ + N
Sbjct: 82   HNQPLLYASPS-KDPRAFLGTLPSPVLSKDDRSHNRD--PEQGLRIAWQYKKYFGEHRPN 138

Query: 964  INSNNNGAQQDYCNDFDLRKPLDRQFFSGMNVDCVSIQDSPNLAALQDRCAGFLAQFSRN 785
             +S+ +  + +YCNDFDLRKPL+R F +  N+ C+SIQD PNLAA +D CA FLAQFSRN
Sbjct: 139  FDSHRD-TKHEYCNDFDLRKPLERYFLTAQNICCLSIQDPPNLAAFRDCCAKFLAQFSRN 197

Query: 784  ESSISSAGRIAIQSFCSPQCKYANMEWHMLSFIRSLKGMARSSNAVVVVTFPPSLLSPSC 605
             SSIS AGR+AIQSFC+PQC+Y+NMEW MLSFIRSLKGM R SNAV V+TFPPSLLSPS 
Sbjct: 198  NSSISCAGRVAIQSFCAPQCEYSNMEWDMLSFIRSLKGMIRDSNAVAVITFPPSLLSPSS 257

Query: 604  SKRLQHMADTLLSVRAIPDEDKEMAKLLTGYQDMVGLLNVHKVARLNTQVPVILEATTFS 425
            SKR QH+ADTLLSV+AIPDEDKE+A LLTGYQDMVGLLNVHKVA +NTQVPVILEATTFS
Sbjct: 258  SKRWQHIADTLLSVKAIPDEDKELANLLTGYQDMVGLLNVHKVANVNTQVPVILEATTFS 317

Query: 424  IKLQKRRFLVLECLNQAPIDXXXXXXXXXXXXXXXSTKAGPLDF 293
            IKLQKRR+LVLECLNQAP+D               STK G LDF
Sbjct: 318  IKLQKRRYLVLECLNQAPVDGSSGSSYASTGSCSGSTKTGTLDF 361


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