BLASTX nr result

ID: Glycyrrhiza23_contig00015060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015060
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537777.1| PREDICTED: uncharacterized protein LOC100786...    69   5e-10
ref|XP_003540672.1| PREDICTED: uncharacterized protein LOC100779...    67   2e-09
gb|AAA74208.1| protein localized in the nucleoli of pea nuclei; ...    64   1e-08
ref|XP_002527136.1| nucleic acid binding protein, putative [Rici...    60   1e-07
ref|XP_003607240.1| RNA-binding protein [Medicago truncatula] gi...    60   2e-07

>ref|XP_003537777.1| PREDICTED: uncharacterized protein LOC100786132 [Glycine max]
          Length = 748

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 38/45 (84%), Positives = 39/45 (86%), Gaps = 1/45 (2%)
 Frame = +1

Query: 214 MGKSSKKSATKVDAAPAVVTPSKSAKK-GKRQSDAEIEKQASAKK 345
           MGKSSKKSA KVDAAPAVV PSKSAKK GKRQ+  EIEKQ SAKK
Sbjct: 1   MGKSSKKSAIKVDAAPAVVPPSKSAKKGGKRQAQDEIEKQVSAKK 45


>ref|XP_003540672.1| PREDICTED: uncharacterized protein LOC100779929 [Glycine max]
          Length = 744

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/45 (82%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
 Frame = +1

Query: 214 MGKSSKKSATKVDAAPAVVTPSKSAKK-GKRQSDAEIEKQASAKK 345
           MGKSSKKSA KVDA PAVV PSKSAKK GKRQ+  EIEKQ SAKK
Sbjct: 1   MGKSSKKSALKVDAVPAVVPPSKSAKKGGKRQAQDEIEKQLSAKK 45


>gb|AAA74208.1| protein localized in the nucleoli of pea nuclei; ORF; putative
           [Pisum sativum]
          Length = 611

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = +1

Query: 214 MGKSSKKSATKVDAAPAVVTPSKSAKKGKRQSDAEIEKQASAKK 345
           MGKSSKKSATKVDAAP VV+P KS KKGKRQ++ EI K+ SAKK
Sbjct: 1   MGKSSKKSATKVDAAPVVVSPVKSGKKGKRQAEEEI-KKVSAKK 43


>ref|XP_002527136.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223533496|gb|EEF35238.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 642

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/44 (70%), Positives = 34/44 (77%)
 Frame = +1

Query: 214 MGKSSKKSATKVDAAPAVVTPSKSAKKGKRQSDAEIEKQASAKK 345
           MGKSSKKS  KVDAAPAV   SKS KKGKR+++  IEK  SAKK
Sbjct: 1   MGKSSKKSTPKVDAAPAVTPASKSTKKGKREAEEAIEKLVSAKK 44


>ref|XP_003607240.1| RNA-binding protein [Medicago truncatula]
           gi|355508295|gb|AES89437.1| RNA-binding protein
           [Medicago truncatula]
          Length = 623

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/44 (72%), Positives = 36/44 (81%)
 Frame = +1

Query: 214 MGKSSKKSATKVDAAPAVVTPSKSAKKGKRQSDAEIEKQASAKK 345
           M KSSKKSATKVDAAP VV+P KS KKGKRQ++ E+ K  SAKK
Sbjct: 1   MPKSSKKSATKVDAAPVVVSPVKSGKKGKRQAEEEV-KAVSAKK 43


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