BLASTX nr result

ID: Glycyrrhiza23_contig00015030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015030
         (893 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43219.1| unknown [Lotus japonicus]                              193   4e-47
ref|XP_003552163.1| PREDICTED: DNA-directed RNA polymerase III s...   191   2e-46
emb|CBI40586.3| unnamed protein product [Vitis vinifera]              184   2e-44
ref|XP_002267122.1| PREDICTED: DNA-directed RNA polymerase III s...   184   3e-44
ref|NP_001238101.1| uncharacterized protein LOC100527062 [Glycin...   181   2e-43

>gb|AFK43219.1| unknown [Lotus japonicus]
          Length = 111

 Score =  193 bits (491), Expect = 4e-47
 Identities = 86/110 (78%), Positives = 94/110 (85%)
 Frame = +2

Query: 419 MEFCPTCGTMLQYELPGMGRPSRFFCPTCPYVCHIENRVKIKRKQRLVRKEIEPVISHDD 598
           MEFCP+C  ML++ELP MG  SR FC TCPYVC+IE  VKIKRKQRLVRKEI+PVIS+DD
Sbjct: 1   MEFCPSCSNMLKFELPNMGHNSRLFCQTCPYVCYIEKGVKIKRKQRLVRKEIDPVISYDD 60

Query: 599 MKNAPTAEVPCPKCNHDKAAYTEFQTRSADEPATIFYLCLNEKCRHQWRD 748
           MKN PT EV CP C+HDKAAYTE Q RSADEPATIFY CLNEKCRHQWR+
Sbjct: 61  MKNGPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110


>ref|XP_003552163.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
           [Glycine max]
          Length = 111

 Score =  191 bits (485), Expect = 2e-46
 Identities = 84/110 (76%), Positives = 92/110 (83%)
 Frame = +2

Query: 419 MEFCPTCGTMLQYELPGMGRPSRFFCPTCPYVCHIENRVKIKRKQRLVRKEIEPVISHDD 598
           MEFCP+CG MLQYELP MGRPSRFFC  CPYVCHIENRV+IKRKQRLVRKEIEP+ S DD
Sbjct: 1   MEFCPSCGNMLQYELPYMGRPSRFFCSACPYVCHIENRVEIKRKQRLVRKEIEPIFSEDD 60

Query: 599 MKNAPTAEVPCPKCNHDKAAYTEFQTRSADEPATIFYLCLNEKCRHQWRD 748
           M NAP+ E  CP C H KAA+ EFQTRSADEPAT+FY CLN  C+ QWR+
Sbjct: 61  MTNAPSTEATCPFCGHGKAAFKEFQTRSADEPATLFYKCLNNDCKKQWRE 110


>emb|CBI40586.3| unnamed protein product [Vitis vinifera]
          Length = 175

 Score =  184 bits (467), Expect = 2e-44
 Identities = 79/111 (71%), Positives = 89/111 (80%)
 Frame = +2

Query: 416 KMEFCPTCGTMLQYELPGMGRPSRFFCPTCPYVCHIENRVKIKRKQRLVRKEIEPVISHD 595
           +MEFCPTCG  LQYELP MGRP+RFFCPTCPYVCHIE +VKIKRKQRLV+KEIEP+ S D
Sbjct: 64  QMEFCPTCGNFLQYELPHMGRPARFFCPTCPYVCHIETKVKIKRKQRLVKKEIEPIFSKD 123

Query: 596 DMKNAPTAEVPCPKCNHDKAAYTEFQTRSADEPATIFYLCLNEKCRHQWRD 748
           DMKN PT +  CP CN  KA + + QTRSADEP + FY CLNE C  QWR+
Sbjct: 124 DMKNGPTTDATCPHCNFGKAVFQQLQTRSADEPMSTFYWCLNENCGRQWRE 174


>ref|XP_002267122.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
           [Vitis vinifera]
          Length = 111

 Score =  184 bits (466), Expect = 3e-44
 Identities = 79/110 (71%), Positives = 88/110 (80%)
 Frame = +2

Query: 419 MEFCPTCGTMLQYELPGMGRPSRFFCPTCPYVCHIENRVKIKRKQRLVRKEIEPVISHDD 598
           MEFCPTCG  LQYELP MGRP+RFFCPTCPYVCHIE +VKIKRKQRLV+KEIEP+ S DD
Sbjct: 1   MEFCPTCGNFLQYELPHMGRPARFFCPTCPYVCHIETKVKIKRKQRLVKKEIEPIFSKDD 60

Query: 599 MKNAPTAEVPCPKCNHDKAAYTEFQTRSADEPATIFYLCLNEKCRHQWRD 748
           MKN PT +  CP CN  KA + + QTRSADEP + FY CLNE C  QWR+
Sbjct: 61  MKNGPTTDATCPHCNFGKAVFQQLQTRSADEPMSTFYWCLNENCGRQWRE 110


>ref|NP_001238101.1| uncharacterized protein LOC100527062 [Glycine max]
           gi|255631470|gb|ACU16102.1| unknown [Glycine max]
          Length = 111

 Score =  181 bits (459), Expect = 2e-43
 Identities = 81/110 (73%), Positives = 89/110 (80%)
 Frame = +2

Query: 419 MEFCPTCGTMLQYELPGMGRPSRFFCPTCPYVCHIENRVKIKRKQRLVRKEIEPVISHDD 598
           MEFCPTCG MLQYELP MGRPSRFFC  CPYVC IENRV+IKRKQRLV KEIEP+ S DD
Sbjct: 1   MEFCPTCGNMLQYELPYMGRPSRFFCSACPYVCLIENRVEIKRKQRLVSKEIEPIFSEDD 60

Query: 599 MKNAPTAEVPCPKCNHDKAAYTEFQTRSADEPATIFYLCLNEKCRHQWRD 748
           M NA + E  CP C H KAA+ EFQTRSAD PAT+FY CLN +C+ QWR+
Sbjct: 61  MTNAASTEATCPFCGHGKAAFKEFQTRSADGPATLFYKCLNNECKKQWRE 110


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