BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015005
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN09044.1| Ribonuclease H [Medicago truncatula]                   151   1e-34
gb|ABE80156.1| Ribonuclease H [Medicago truncatula]                   114   2e-23
gb|ABD32401.2| Ribonuclease H [Medicago truncatula]                   112   6e-23
gb|AFK48593.1| unknown [Lotus japonicus]                              110   4e-22
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...   101   2e-19

>gb|ABN09044.1| Ribonuclease H [Medicago truncatula]
          Length = 235

 Score =  151 bits (382), Expect = 1e-34
 Identities = 82/216 (37%), Positives = 119/216 (55%)
 Frame = -1

Query: 730 LWSLWIARNKLVFDKEKPPLHVLCSRVVSLIHSINRAFAWIPADQPPAHTPREVAWKGSP 551
           +W +W +RNK +F+  K  +  + ++V+S +H I +AFA  P         R V+W+  P
Sbjct: 16  IWKIWCSRNKCIFEDIKHSIQEIGAQVLSSLHHILKAFAH-PTSHSVQQPARIVSWQ-RP 73

Query: 550 DDNTVALNVDGSCLGNPGRASFGGLLRDHSXXXXXXXXXXXGHTTILQAEXXXXXXXLQC 371
             N+VALNVDG+   +    SFGGL+RDH+               IL  E       L+ 
Sbjct: 74  SMNSVALNVDGNVFLDSNLGSFGGLIRDHTSSFLHGFFGKNSRPCILHVEISGLYHGLKL 133

Query: 370 CWERGFRRVVCYSDSLQVIQLVQEGVQPRHHFSNEVHAIRGLIAREWECQIFHTLREGNQ 191
           CW+ G + VVC+SDS  V+ LVQ+ +   H + N + AI+ L+ R+W   + HTL EGN 
Sbjct: 134 CWDIGIKHVVCHSDSTTVVDLVQKDLNVHHKYGNLIMAIKKLLRRDWVVSLRHTLCEGNA 193

Query: 190 CADFFAKKGVASTMKFCMVMQAPHELALSLLADASG 83
            ADF AKKG  S     ++ +AP ++A  LLADA G
Sbjct: 194 AADFLAKKGALSDTSLVILNEAPPDIAFVLLADAVG 229


>gb|ABE80156.1| Ribonuclease H [Medicago truncatula]
          Length = 438

 Score =  114 bits (285), Expect = 2e-23
 Identities = 75/217 (34%), Positives = 105/217 (48%), Gaps = 1/217 (0%)
 Frame = -1

Query: 730 LWSLWIARNKLVFDKEKPPLHVLCSRVVSLIHSINRAFAWIPADQPPAHTPREVAWKGSP 551
           LW  W  RN +  + E   L  LC+ +VS    I  AF    +++   H+ R V W    
Sbjct: 221 LWWAWRHRNLMCLNNETMSLFRLCNNIVSAATYIKSAF---DSEENVNHSDRFVKWNNRN 277

Query: 550 DDNTVALNVDGSCLGNPGRASFGGLLRDHSXXXXXXXXXXXGHTT-ILQAEXXXXXXXLQ 374
             + + LNVDGSCLG P R  +GG+LR+ +            ++T ILQAE       L 
Sbjct: 278 HHDHI-LNVDGSCLGTPSRTGYGGILRNSAGLFISGFSGFIPNSTDILQAELTAIHQSLH 336

Query: 373 CCWERGFRRVVCYSDSLQVIQLVQEGVQPRHHFSNEVHAIRGLIAREWECQIFHTLREGN 194
              +     V+CYSDSL  + L+       H ++  +  I+ L++      + HTLREGN
Sbjct: 337 MVIDSNMNDVMCYSDSLLAVNLIMNDTPRYHTYAVLIQNIKDLLSVR-NITLHHTLREGN 395

Query: 193 QCADFFAKKGVASTMKFCMVMQAPHELALSLLADASG 83
           QCADFFAK G  S +   +    P +L   L ADA G
Sbjct: 396 QCADFFAKLGANSDVHLVVHQSPPADLLPLLRADAIG 432


>gb|ABD32401.2| Ribonuclease H [Medicago truncatula]
          Length = 233

 Score =  112 bits (281), Expect = 6e-23
 Identities = 71/217 (32%), Positives = 105/217 (48%), Gaps = 1/217 (0%)
 Frame = -1

Query: 730 LWSLWIARNKLVFDKEKPPLHVLCSRVVSLIHSINRAFAWIPADQPPAHTPREVAWKGSP 551
           LW +W  RN +  + E   L  LC+ ++S   + N AF     ++ P H+ R V W    
Sbjct: 16  LWWVWRHRNLMCLNNETLSLFRLCNNIISAADAANSAFN---GEENPPHSDRLVKWNNRN 72

Query: 550 DDNTVALNVDGSCLGNPGRASFGGLLRDHSXXXXXXXXXXXGHTT-ILQAEXXXXXXXLQ 374
             + + LNVDGSC+G P R  +GG+LR+ +            ++  IL AE       L+
Sbjct: 73  HQDFI-LNVDGSCIGTPPRTGYGGVLRNSAGLFISGFSGLIPNSADILLAELTAIHQGLK 131

Query: 373 CCWERGFRRVVCYSDSLQVIQLVQEGVQPRHHFSNEVHAIRGLIAREWECQIFHTLREGN 194
              +     ++CYSDSL  + L+       H ++  +  I+ L+  +    + HTLREGN
Sbjct: 132 LVTDLNVNEIMCYSDSLLAVNLIANDTPRYHIYAALIQNIKDLL-NDRNISLHHTLREGN 190

Query: 193 QCADFFAKKGVASTMKFCMVMQAPHELALSLLADASG 83
           QCADFFAK G  S     +    P +L   L ADA G
Sbjct: 191 QCADFFAKFGANSDAALVVHQSPPADLLPLLRADALG 227


>gb|AFK48593.1| unknown [Lotus japonicus]
          Length = 272

 Score =  110 bits (274), Expect = 4e-22
 Identities = 74/216 (34%), Positives = 96/216 (44%)
 Frame = -1

Query: 730 LWSLWIARNKLVFDKEKPPLHVLCSRVVSLIHSINRAFAWIPADQPPAHTPREVAWKGSP 551
           LW +W  RN    + +  P  VL   ++++   I R +A +  D P  HTPR V W    
Sbjct: 54  LWWVWRLRNVWCMEGKLIPWQVLRGDILAMFDDIARCYA-VDVDAP-MHTPRLVRWTVGL 111

Query: 550 DDNTVALNVDGSCLGNPGRASFGGLLRDHSXXXXXXXXXXXGHTTILQAEXXXXXXXLQC 371
            D  V LNVDGS  G P R  FGG  R                  IL  E       L  
Sbjct: 112 AD-CVVLNVDGSVHGTPQRGGFGGCFRTIHGNWLRGFFGYLDECCILHLELLGMFHGLSL 170

Query: 370 CWERGFRRVVCYSDSLQVIQLVQEGVQPRHHFSNEVHAIRGLIAREWECQIFHTLREGNQ 191
            WE+G+R V C SDS   + LV+      H ++  V  I+ L +R+W  ++ HTLREGN 
Sbjct: 171 AWEQGYRIVECQSDSQDAVTLVKSTPSSCHRYAALVWDIKDLQSRDWIVELRHTLREGNA 230

Query: 190 CADFFAKKGVASTMKFCMVMQAPHELALSLLADASG 83
           CAD   K G        +       L + LLADA G
Sbjct: 231 CADLLVKHGADQNDDLVITENPIAGLGVLLLADARG 266


>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            [Medicago truncatula]
          Length = 1296

 Score =  101 bits (251), Expect = 2e-19
 Identities = 72/217 (33%), Positives = 99/217 (45%), Gaps = 1/217 (0%)
 Frame = -1

Query: 730  LWSLWIARNKLVFDKEKPPLHVLCSRVVSLIHSINRAFAWIPADQPPAHTPREVAWKGSP 551
            LW  W  RN +    E  PL  +  R+   I++I  AF      QP +   R V W    
Sbjct: 1078 LWWSWRHRNLMCLSNETWPLTRISFRINDSINAIRSAFVKSNVIQPDS--ARMVKWNQGN 1135

Query: 550  DDNTVALNVDGSCLGNPGRASFGGLLRDHSXXXXXXXXXXXGHTT-ILQAEXXXXXXXLQ 374
                + LNVDGSCLG P RA FGG+ R++              +T IL AE       L 
Sbjct: 1136 HQCHI-LNVDGSCLGTPIRAGFGGIFRNNVGGYLSGYSGFISESTDILLAELTALHQGLI 1194

Query: 373  CCWERGFRRVVCYSDSLQVIQLVQEGVQPRHHFSNEVHAIRGLIAREWECQIFHTLREGN 194
               E G   + CYSDSL  I L+       H ++  +  I+ L++      ++H  REGN
Sbjct: 1195 MAAEMGIEELACYSDSLLTINLITRTTSKYHTYAVLIQDIKDLLSAH-NFSVYHCFREGN 1253

Query: 193  QCADFFAKKGVASTMKFCMVMQAPHELALSLLADASG 83
            QCAD+ AK G +S  +  +   A  EL + +  DA G
Sbjct: 1254 QCADYLAKLGASSNEECLVHASACQELLVLIQMDAIG 1290