BLASTX nr result

ID: Glycyrrhiza23_contig00014999 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014999
         (950 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516789.1| PREDICTED: zinc finger CCCH domain-containin...   252   8e-65
ref|XP_003628788.1| Zinc finger CCCH domain-containing protein [...   236   6e-60
ref|XP_002527651.1| nucleic acid binding protein, putative [Rici...   216   5e-54
ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containin...   210   3e-52
ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containin...   210   3e-52

>ref|XP_003516789.1| PREDICTED: zinc finger CCCH domain-containing protein 56-like
           [Glycine max]
          Length = 368

 Score =  252 bits (644), Expect = 8e-65
 Identities = 115/128 (89%), Positives = 119/128 (92%)
 Frame = -2

Query: 874 NSKPSNWKTRICNKWEMTGYCPFGNKCHFAHGATELHRYGGGPLEGENRDTASAVAADTK 695
           NSKPSNWKTRICNKWEMTGYCPFGNKCHFAHGATELHRYGGG +EGENRD ASAVA DT 
Sbjct: 241 NSKPSNWKTRICNKWEMTGYCPFGNKCHFAHGATELHRYGGGLMEGENRDAASAVAGDTN 300

Query: 694 QGVPSKTHADNVVASATPVAHSDVYHIGVPSQRPSSIVIQRPGQRTHQKWKGPDKISRIY 515
           +GVPSK  ADNVVA+ T VAHSDVYHIGVPSQRPSS+VIQRPGQR HQKWKGPDKISRIY
Sbjct: 301 KGVPSKASADNVVAAVTLVAHSDVYHIGVPSQRPSSMVIQRPGQRAHQKWKGPDKISRIY 360

Query: 514 GDWIDDIE 491
           GDWIDDIE
Sbjct: 361 GDWIDDIE 368


>ref|XP_003628788.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355522810|gb|AET03264.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 376

 Score =  236 bits (602), Expect = 6e-60
 Identities = 110/128 (85%), Positives = 115/128 (89%)
 Frame = -2

Query: 874 NSKPSNWKTRICNKWEMTGYCPFGNKCHFAHGATELHRYGGGPLEGENRDTASAVAADTK 695
           N KPSNWKTRICNKWEMTGYCPFGNKCHFAHGATELHRYGGG +EGE+RD  S VA+DTK
Sbjct: 251 NLKPSNWKTRICNKWEMTGYCPFGNKCHFAHGATELHRYGGGLMEGESRDGVSVVASDTK 310

Query: 694 QGVPSKTHADNVVASATPVAHSDVYHIGVPSQRPSSIVIQRPGQRTHQKWKGPDKISRIY 515
           QGVPSKTHADNVVAS  P+  SDVYH+GVPSQRP SIV QRPGQR HQKWKGPDKISRIY
Sbjct: 311 QGVPSKTHADNVVASNPPIG-SDVYHLGVPSQRP-SIVSQRPGQRAHQKWKGPDKISRIY 368

Query: 514 GDWIDDIE 491
           GDWIDD E
Sbjct: 369 GDWIDDFE 376


>ref|XP_002527651.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223532956|gb|EEF34722.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 349

 Score =  216 bits (551), Expect = 5e-54
 Identities = 104/129 (80%), Positives = 112/129 (86%), Gaps = 1/129 (0%)
 Frame = -2

Query: 874 NSKPSNWKTRICNKWEMTGYCPFGNKCHFAHGATELHRYGGGPLEGENRDTASAVAADTK 695
           N KPSNWKTRICNKWE+TGYCPFGNKCHFAHGA ELHRYGGG +E E +D  S+V ADTK
Sbjct: 223 NVKPSNWKTRICNKWELTGYCPFGNKCHFAHGAAELHRYGGGLMESEGKD-PSSVPADTK 281

Query: 694 Q-GVPSKTHADNVVASATPVAHSDVYHIGVPSQRPSSIVIQRPGQRTHQKWKGPDKISRI 518
           Q GV SKT AD VVAS   V HSDVYH+GVPSQRP SI++QRPGQR+HQKWKGPDKISRI
Sbjct: 282 QGGVLSKTPADIVVASVASVPHSDVYHLGVPSQRP-SILMQRPGQRSHQKWKGPDKISRI 340

Query: 517 YGDWIDDIE 491
           YGDWIDDIE
Sbjct: 341 YGDWIDDIE 349


>ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
           [Cucumis sativus]
          Length = 350

 Score =  210 bits (535), Expect = 3e-52
 Identities = 99/129 (76%), Positives = 107/129 (82%)
 Frame = -2

Query: 877 TNSKPSNWKTRICNKWEMTGYCPFGNKCHFAHGATELHRYGGGPLEGENRDTASAVAADT 698
           +N+KPSNWKTRICNKWE+TGYCPFGNKCHFAHGA ELHRYGGG +E E RD +SA   D 
Sbjct: 224 SNTKPSNWKTRICNKWELTGYCPFGNKCHFAHGAAELHRYGGGLMETETRD-SSAAPPDL 282

Query: 697 KQGVPSKTHADNVVASATPVAHSDVYHIGVPSQRPSSIVIQRPGQRTHQKWKGPDKISRI 518
           KQGV  K   D +VAS     HSDVYH+ VPSQR S+IVIQRPGQRTHQKWKGPDKISRI
Sbjct: 283 KQGVLPKAPGDTLVASVPSAPHSDVYHVVVPSQR-STIVIQRPGQRTHQKWKGPDKISRI 341

Query: 517 YGDWIDDIE 491
           YGDWIDDIE
Sbjct: 342 YGDWIDDIE 350


>ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
           [Cucumis sativus]
          Length = 339

 Score =  210 bits (535), Expect = 3e-52
 Identities = 99/129 (76%), Positives = 107/129 (82%)
 Frame = -2

Query: 877 TNSKPSNWKTRICNKWEMTGYCPFGNKCHFAHGATELHRYGGGPLEGENRDTASAVAADT 698
           +N+KPSNWKTRICNKWE+TGYCPFGNKCHFAHGA ELHRYGGG +E E RD +SA   D 
Sbjct: 213 SNTKPSNWKTRICNKWELTGYCPFGNKCHFAHGAAELHRYGGGLMETETRD-SSAAPPDL 271

Query: 697 KQGVPSKTHADNVVASATPVAHSDVYHIGVPSQRPSSIVIQRPGQRTHQKWKGPDKISRI 518
           KQGV  K   D +VAS     HSDVYH+ VPSQR S+IVIQRPGQRTHQKWKGPDKISRI
Sbjct: 272 KQGVLPKAPGDTLVASVPSAPHSDVYHVVVPSQR-STIVIQRPGQRTHQKWKGPDKISRI 330

Query: 517 YGDWIDDIE 491
           YGDWIDDIE
Sbjct: 331 YGDWIDDIE 339


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