BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014981
         (834 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617141.1| Pentatricopeptide repeat-containing protein ...   508   e-142
ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containi...   508   e-142
emb|CBI26264.3| unnamed protein product [Vitis vinifera]              441   e-122
ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containi...   441   e-122
ref|XP_002314694.1| predicted protein [Populus trichocarpa] gi|2...   417   e-114

>ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355518476|gb|AET00100.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 684

 Score =  508 bits (1308), Expect = e-142
 Identities = 248/277 (89%), Positives = 265/277 (95%)
 Frame = +3

Query: 3    ALVDLYGKCGSIENAEQVFSEMPQRNLVTWNAMIGGYAHQGDVDMALGLFEEMTMGSCGI 182
            ALVD+YGKCGSIENAEQVFSE+P+RNLVTWNAMIGGYAHQGD+DMAL LFEEMT+GS GI
Sbjct: 350  ALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGI 409

Query: 183  APSYVTLVSVLSACSRAGAVERGMQIFESMRVIYGIEPGAEHYACVVDLLGRSGLVDRAY 362
             PSYVTL+S+LS CSR GAVERG+QIFESMR+ YGIEPGAEH+ACVVDLLGRSGLVDRAY
Sbjct: 410  RPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAY 469

Query: 363  EFIQNMPIHPTISVWGALLGSCRMHGKTKLGKIAAEKLFELDPEDSGNHVVLSNILASAG 542
            EFIQNM I PTISVWGALLG+CRMHGKT+LGKIAAEKLFELD  DSGNHVVLSN+LASAG
Sbjct: 470  EFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAG 529

Query: 543  RWEEATIVRKEMKDIGIRKNVGYSWIAVKNRIHVFQAKDSSHEKNSEIQAMLAKLRGEMK 722
            RWEEAT+VRKEMKDIGI+KNVGYSWIAVKNRIHVFQAKDSSH++NSEIQAML KLRG MK
Sbjct: 530  RWEEATVVRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMK 589

Query: 723  EAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGL 833
            EAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGL
Sbjct: 590  EAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGL 626



 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 1/160 (0%)
 Frame = +3

Query: 6   LVDLYGKCGSIENAEQVFSEMPQR-NLVTWNAMIGGYAHQGDVDMALGLFEEMTMGSCGI 182
           L+D YGKCG I +AE VF+ +  R N+V+W +M+       + + A  +F +       +
Sbjct: 250 LIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARK---EV 306

Query: 183 APSYVTLVSVLSACSRAGAVERGMQIFESMRVIYGIEPGAEHYACVVDLLGRSGLVDRAY 362
            P+   + SVLSAC+  G +E G  +  ++ V   +E      + +VD+ G+ G ++ A 
Sbjct: 307 EPTDFMISSVLSACAELGGLELGRSV-HALAVKACVEDNIFVGSALVDMYGKCGSIENAE 365

Query: 363 EFIQNMPIHPTISVWGALLGSCRMHGKTKLGKIAAEKLFE 482
           +    +P    +  W A++G     G   +    A +LFE
Sbjct: 366 QVFSELP-ERNLVTWNAMIGGYAHQGDIDM----ALRLFE 400


>ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14850-like
            [Glycine max]
          Length = 686

 Score =  508 bits (1307), Expect = e-142
 Identities = 250/277 (90%), Positives = 264/277 (95%)
 Frame = +3

Query: 3    ALVDLYGKCGSIENAEQVFSEMPQRNLVTWNAMIGGYAHQGDVDMALGLFEEMTMGSCGI 182
            ALVDLYGKCGSIE AEQVF EMP+RNLVTWNAMIGGYAH GDVDMAL LF+EMT GSCGI
Sbjct: 352  ALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGI 411

Query: 183  APSYVTLVSVLSACSRAGAVERGMQIFESMRVIYGIEPGAEHYACVVDLLGRSGLVDRAY 362
            A SYVTLVSVLSACSRAGAVERG+QIFESMR  YGIEPGAEHYACVVDLLGRSGLVDRAY
Sbjct: 412  ALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAY 471

Query: 363  EFIQNMPIHPTISVWGALLGSCRMHGKTKLGKIAAEKLFELDPEDSGNHVVLSNILASAG 542
            EFI+ MPI PTISVWGALLG+C+MHGKTKLGKIAAEKLFELDP+DSGNHVV SN+LASAG
Sbjct: 472  EFIKRMPILPTISVWGALLGACKMHGKTKLGKIAAEKLFELDPDDSGNHVVFSNMLASAG 531

Query: 543  RWEEATIVRKEMKDIGIRKNVGYSWIAVKNRIHVFQAKDSSHEKNSEIQAMLAKLRGEMK 722
            RWEEATIVRKEM+DIGI+KNVGYSW+AVKNR+HVFQAKDS HEKNSEIQAMLAKLRGEMK
Sbjct: 532  RWEEATIVRKEMRDIGIKKNVGYSWVAVKNRVHVFQAKDSFHEKNSEIQAMLAKLRGEMK 591

Query: 723  EAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGL 833
            +AGYVPD NLSLFDLE+EEKASEVWYHSEKIALAFGL
Sbjct: 592  KAGYVPDANLSLFDLEEEEKASEVWYHSEKIALAFGL 628



 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 45/182 (24%), Positives = 90/182 (49%), Gaps = 2/182 (1%)
 Frame = +3

Query: 6   LVDLYGKCGSIENAEQVFSEM--PQRNLVTWNAMIGGYAHQGDVDMALGLFEEMTMGSCG 179
           L+D YGKCG I ++E VFS +   +RN+V+W +++       + + A  +F +       
Sbjct: 251 LIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARK---E 307

Query: 180 IAPSYVTLVSVLSACSRAGAVERGMQIFESMRVIYGIEPGAEHYACVVDLLGRSGLVDRA 359
           + P+   + SVLSAC+  G +E G  +  ++ +   +E      + +VDL G+ G ++ A
Sbjct: 308 VEPTDFMISSVLSACAELGGLELGRSV-HALALKACVEENIFVGSALVDLYGKCGSIEYA 366

Query: 360 YEFIQNMPIHPTISVWGALLGSCRMHGKTKLGKIAAEKLFELDPEDSGNHVVLSNILASA 539
            +  + MP    +  W A++G     G   +     +++       + ++V L ++L++ 
Sbjct: 367 EQVFREMP-ERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSAC 425

Query: 540 GR 545
            R
Sbjct: 426 SR 427


>emb|CBI26264.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  441 bits (1135), Expect = e-122
 Identities = 209/277 (75%), Positives = 246/277 (88%)
 Frame = +3

Query: 3    ALVDLYGKCGSIENAEQVFSEMPQRNLVTWNAMIGGYAHQGDVDMALGLFEEMTMGSCGI 182
            ALVD+YGKCGSIE+AE+ F EMP+RNLVTWNAMIGGYAHQG  DMA+ LF+EMT GS  +
Sbjct: 249  ALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRV 308

Query: 183  APSYVTLVSVLSACSRAGAVERGMQIFESMRVIYGIEPGAEHYACVVDLLGRSGLVDRAY 362
            AP+YVT V VLSACSRAG+V  GM+IFESMR  YGIEPGAEHYACVVDLLGR+G+V++AY
Sbjct: 309  APNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAY 368

Query: 363  EFIQNMPIHPTISVWGALLGSCRMHGKTKLGKIAAEKLFELDPEDSGNHVVLSNILASAG 542
            +FI+ MPI PT+SVWGALLG+ +M GK++LGK+AA+ LFELDP DSGNHV+LSN+ A+AG
Sbjct: 369  QFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAG 428

Query: 543  RWEEATIVRKEMKDIGIRKNVGYSWIAVKNRIHVFQAKDSSHEKNSEIQAMLAKLRGEMK 722
            RWEEAT+VRKEMKD+GI+K  G SWI   N +HVFQAKD+SHE+NSEIQAMLAKLRGEM+
Sbjct: 429  RWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEME 488

Query: 723  EAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGL 833
             AGY+PDT+ +LFDLE+EEKA EVWYHSEKIALAFGL
Sbjct: 489  AAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGL 525



 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 53/171 (30%), Positives = 80/171 (46%)
 Frame = +3

Query: 12  DLYGKCGSIENAEQVFSEMPQRNLVTWNAMIGGYAHQGDVDMALGLFEEMTMGSCGIAPS 191
           D+Y K G  E A ++F EMP+RN+ TWNA +     +G  D AL  F E      GI P+
Sbjct: 151 DMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEARKE--GIEPT 208

Query: 192 YVTLVSVLSACSRAGAVERGMQIFESMRVIYGIEPGAEHYACVVDLLGRSGLVDRAYEFI 371
              + SVLSAC+    +E G  +  ++ V   +       + +VD+ G+ G ++ A    
Sbjct: 209 DFMVSSVLSACAGLSVLEVGKSV-HTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAF 267

Query: 372 QNMPIHPTISVWGALLGSCRMHGKTKLGKIAAEKLFELDPEDSGNHVVLSN 524
             MP    +  W A++G     G+  +    A  LF  D    G+H V  N
Sbjct: 268 DEMP-ERNLVTWNAMIGGYAHQGQADM----AVTLF--DEMTCGSHRVAPN 311


>ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14850-like
            [Vitis vinifera]
          Length = 684

 Score =  441 bits (1135), Expect = e-122
 Identities = 209/277 (75%), Positives = 246/277 (88%)
 Frame = +3

Query: 3    ALVDLYGKCGSIENAEQVFSEMPQRNLVTWNAMIGGYAHQGDVDMALGLFEEMTMGSCGI 182
            ALVD+YGKCGSIE+AE+ F EMP+RNLVTWNAMIGGYAHQG  DMA+ LF+EMT GS  +
Sbjct: 350  ALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRV 409

Query: 183  APSYVTLVSVLSACSRAGAVERGMQIFESMRVIYGIEPGAEHYACVVDLLGRSGLVDRAY 362
            AP+YVT V VLSACSRAG+V  GM+IFESMR  YGIEPGAEHYACVVDLLGR+G+V++AY
Sbjct: 410  APNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAY 469

Query: 363  EFIQNMPIHPTISVWGALLGSCRMHGKTKLGKIAAEKLFELDPEDSGNHVVLSNILASAG 542
            +FI+ MPI PT+SVWGALLG+ +M GK++LGK+AA+ LFELDP DSGNHV+LSN+ A+AG
Sbjct: 470  QFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAG 529

Query: 543  RWEEATIVRKEMKDIGIRKNVGYSWIAVKNRIHVFQAKDSSHEKNSEIQAMLAKLRGEMK 722
            RWEEAT+VRKEMKD+GI+K  G SWI   N +HVFQAKD+SHE+NSEIQAMLAKLRGEM+
Sbjct: 530  RWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEME 589

Query: 723  EAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGL 833
             AGY+PDT+ +LFDLE+EEKA EVWYHSEKIALAFGL
Sbjct: 590  AAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGL 626



 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 48/173 (27%), Positives = 80/173 (46%)
 Frame = +3

Query: 6   LVDLYGKCGSIENAEQVFSEMPQRNLVTWNAMIGGYAHQGDVDMALGLFEEMTMGSCGIA 185
           L+D YGKC  +  +E +FS + + N V+W +MI  Y    + + A  +F  +     GI 
Sbjct: 250 LIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVF--LRARKEGIE 307

Query: 186 PSYVTLVSVLSACSRAGAVERGMQIFESMRVIYGIEPGAEHYACVVDLLGRSGLVDRAYE 365
           P+   + SVLSAC+    +E G  +  ++ V   +       + +VD+ G+ G ++ A  
Sbjct: 308 PTDFMVSSVLSACAGLSVLEVGKSV-HTLAVKACVVGNIFVGSALVDMYGKCGSIEDAER 366

Query: 366 FIQNMPIHPTISVWGALLGSCRMHGKTKLGKIAAEKLFELDPEDSGNHVVLSN 524
               MP    +  W A++G     G+  +    A  LF  D    G+H V  N
Sbjct: 367 AFDEMP-ERNLVTWNAMIGGYAHQGQADM----AVTLF--DEMTCGSHRVAPN 412



 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 31/83 (37%), Positives = 45/83 (54%)
 Frame = +3

Query: 12  DLYGKCGSIENAEQVFSEMPQRNLVTWNAMIGGYAHQGDVDMALGLFEEMTMGSCGIAPS 191
           D+Y K G  E A ++F EMP+RN+ TWNA +     +G  D AL  F E      G  P+
Sbjct: 151 DMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHE--GWEPN 208

Query: 192 YVTLVSVLSACSRAGAVERGMQI 260
            +T  + L+AC+ A  +  G Q+
Sbjct: 209 LITFCAFLNACAGASYLRLGRQL 231


>ref|XP_002314694.1| predicted protein [Populus trichocarpa] gi|222863734|gb|EEF00865.1|
            predicted protein [Populus trichocarpa]
          Length = 631

 Score =  417 bits (1072), Expect = e-114
 Identities = 198/277 (71%), Positives = 240/277 (86%)
 Frame = +3

Query: 3    ALVDLYGKCGSIENAEQVFSEMPQRNLVTWNAMIGGYAHQGDVDMALGLFEEMTMGSCGI 182
            ALVD+YGKCGSIE+ EQVF EMP+RNLV+WNAMI GYAHQGDVDMA+ LFEEM   +   
Sbjct: 300  ALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAVA- 358

Query: 183  APSYVTLVSVLSACSRAGAVERGMQIFESMRVIYGIEPGAEHYACVVDLLGRSGLVDRAY 362
              +YVTL+ VLSACSR GAV+ G +IFESMR  Y IEPGAEHYAC+ D+LGR+G+V+RAY
Sbjct: 359  --NYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAY 416

Query: 363  EFIQNMPIHPTISVWGALLGSCRMHGKTKLGKIAAEKLFELDPEDSGNHVVLSNILASAG 542
            EF+Q MPI PTISVWGALL +CR++G+ +LGKIAA+ LF+LDP+DSGNHV+LSN+ A+AG
Sbjct: 417  EFVQKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAG 476

Query: 543  RWEEATIVRKEMKDIGIRKNVGYSWIAVKNRIHVFQAKDSSHEKNSEIQAMLAKLRGEMK 722
            RW+EAT+VRKEMKD+GI+K  G SW+  KN++HVFQAKD+SHE+NSEIQAML KLR EM+
Sbjct: 477  RWDEATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAKDTSHERNSEIQAMLVKLRTEMQ 536

Query: 723  EAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGL 833
             AGY+PDTN +L+DLE+EEK +EV YHSEKIALAFGL
Sbjct: 537  AAGYMPDTNYALYDLEEEEKMTEVGYHSEKIALAFGL 573



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 48/181 (26%), Positives = 84/181 (46%), Gaps = 1/181 (0%)
 Frame = +3

Query: 6   LVDLYGKCGSIENAEQVFSEMPQRNLVTWNAMIGGYAHQGDVDMALGLFEEMTMG-SCGI 182
           ++D+YGKC  +E AE VF+ M +RN V+W  M+       + + A  +F    MG   GI
Sbjct: 200 IIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVF---LMGRKEGI 256

Query: 183 APSYVTLVSVLSACSRAGAVERGMQIFESMRVIYGIEPGAEHYACVVDLLGRSGLVDRAY 362
             +   + SV+SA +    +E G  +  ++ V   +E      + +VD+ G+ G ++   
Sbjct: 257 ELTDYMVSSVISAYAGISGLEFGRSV-HALAVKACVEGDIFVGSALVDMYGKCGSIEDCE 315

Query: 363 EFIQNMPIHPTISVWGALLGSCRMHGKTKLGKIAAEKLFELDPEDSGNHVVLSNILASAG 542
           +    MP    +S W A++      G   +     E   E+  E   N+V L  +L++  
Sbjct: 316 QVFHEMPERNLVS-WNAMISGYAHQGDVDMAMTLFE---EMQSEAVANYVTLICVLSACS 371

Query: 543 R 545
           R
Sbjct: 372 R 372



 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 38/142 (26%), Positives = 64/142 (45%)
 Frame = +3

Query: 12  DLYGKCGSIENAEQVFSEMPQRNLVTWNAMIGGYAHQGDVDMALGLFEEMTMGSCGIAPS 191
           D+Y K G    A+++F EMP RN+  WNA I      G    A+  F E      G  P 
Sbjct: 101 DMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDGRPGKAIDKFIEFR--RVGGEPD 158

Query: 192 YVTLVSVLSACSRAGAVERGMQIFESMRVIYGIEPGAEHYACVVDLLGRSGLVDRAYEFI 371
            +T  + L+AC+ A  ++ G Q+   + +  G E        ++D+ G+   V+ A    
Sbjct: 159 LITFCAFLNACADARCLDLGRQL-HGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVF 217

Query: 372 QNMPIHPTISVWGALLGSCRMH 437
             M    ++S W  ++ +C  +
Sbjct: 218 NGMGRRNSVS-WCTMVAACEQN 238