BLASTX nr result

ID: Glycyrrhiza23_contig00014930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014930
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520093.1| PREDICTED: pentatricopeptide repeat-containi...   197   6e-49
gb|ACU21153.1| unknown [Glycine max]                                  195   4e-48
ref|XP_003629226.1| Pentatricopeptide repeat-containing protein ...   191   5e-47
emb|CBI24452.3| unnamed protein product [Vitis vinifera]              146   2e-33
ref|XP_004146207.1| PREDICTED: pentatricopeptide repeat-containi...   138   4e-31

>ref|XP_003520093.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 503

 Score =  197 bits (502), Expect = 6e-49
 Identities = 95/105 (90%), Positives = 103/105 (98%)
 Frame = +3

Query: 3   GDLEKAVDFIQSMPIQPEKNVYGALLGACRIHKNIELAELAAEKLFILDPNNAGRYVILA 182
           GDLEKAV+FIQSMPIQP KN+YGALLGACRIHKN+ELAELAAEKLF+LDP+NAGRYVILA
Sbjct: 371 GDLEKAVEFIQSMPIQPGKNIYGALLGACRIHKNMELAELAAEKLFVLDPDNAGRYVILA 430

Query: 183 QMYEDAGRWQDAARVRKVIREKEIKKPIGYSSVELESGHQKFGVN 317
           QMYEDA RWQDAARVRKV+++KEIKKPIGYSSVELESGHQKFGVN
Sbjct: 431 QMYEDAERWQDAARVRKVVKDKEIKKPIGYSSVELESGHQKFGVN 475


>gb|ACU21153.1| unknown [Glycine max]
          Length = 529

 Score =  195 bits (495), Expect = 4e-48
 Identities = 94/105 (89%), Positives = 102/105 (97%)
 Frame = +3

Query: 3   GDLEKAVDFIQSMPIQPEKNVYGALLGACRIHKNIELAELAAEKLFILDPNNAGRYVILA 182
           GDLEKAV+FIQSMPIQP KN+YGALLGACRIHKN+ELAELAAEKLF+LDP+NAGRYVILA
Sbjct: 371 GDLEKAVEFIQSMPIQPGKNIYGALLGACRIHKNMELAELAAEKLFVLDPDNAGRYVILA 430

Query: 183 QMYEDAGRWQDAARVRKVIREKEIKKPIGYSSVELESGHQKFGVN 317
           QMYEDA RW DAARVRKV+++KEIKKPIGYSSVELESGHQKFGVN
Sbjct: 431 QMYEDAERWLDAARVRKVVKDKEIKKPIGYSSVELESGHQKFGVN 475


>ref|XP_003629226.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355523248|gb|AET03702.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 510

 Score =  191 bits (485), Expect = 5e-47
 Identities = 93/105 (88%), Positives = 101/105 (96%)
 Frame = +3

Query: 3   GDLEKAVDFIQSMPIQPEKNVYGALLGACRIHKNIELAELAAEKLFILDPNNAGRYVILA 182
           G+LEKA++ IQSMPIQP KNVYGALLGA RIHKNIELAELAAEKLF+LDPNNAGRYVILA
Sbjct: 373 GNLEKAMELIQSMPIQPGKNVYGALLGASRIHKNIELAELAAEKLFVLDPNNAGRYVILA 432

Query: 183 QMYEDAGRWQDAARVRKVIREKEIKKPIGYSSVELESGHQKFGVN 317
           QMYED GRW+DAAR+RK+IREKEIKKPIGYSSVELESGH+KFGVN
Sbjct: 433 QMYEDEGRWKDAARLRKIIREKEIKKPIGYSSVELESGHKKFGVN 477


>emb|CBI24452.3| unnamed protein product [Vitis vinifera]
          Length = 503

 Score =  146 bits (368), Expect = 2e-33
 Identities = 67/104 (64%), Positives = 88/104 (84%)
 Frame = +3

Query: 3   GDLEKAVDFIQSMPIQPEKNVYGALLGACRIHKNIELAELAAEKLFILDPNNAGRYVILA 182
           G L +AV+F+++MP+QP K+VYGALLGACRIH NIELAE  AEKLF+LDP+NAGRY+IL 
Sbjct: 362 GFLHEAVEFVKNMPVQPGKDVYGALLGACRIHNNIELAEEIAEKLFVLDPDNAGRYIILV 421

Query: 183 QMYEDAGRWQDAARVRKVIREKEIKKPIGYSSVELESGHQKFGV 314
           +MYEDAG+W++AAR+RK ++EK I+KP+G S++EL      FGV
Sbjct: 422 KMYEDAGKWENAARLRKALKEKNIRKPLGCSAIELGCVLHTFGV 465


>ref|XP_004146207.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 480

 Score =  138 bits (348), Expect = 4e-31
 Identities = 64/103 (62%), Positives = 83/103 (80%)
 Frame = +3

Query: 3   GDLEKAVDFIQSMPIQPEKNVYGALLGACRIHKNIELAELAAEKLFILDPNNAGRYVILA 182
           G LE+AV+FI+ MP+Q  K+VYGALLGACRIH N+ELA+   EKLFILDP  A RYV LA
Sbjct: 348 GFLEQAVEFIEGMPVQAGKDVYGALLGACRIHNNLELAKEVGEKLFILDPEKASRYVTLA 407

Query: 183 QMYEDAGRWQDAARVRKVIREKEIKKPIGYSSVELESGHQKFG 311
            MYEDAG+W+DAA++RK++R++ I+KP G SS+E++  H  FG
Sbjct: 408 TMYEDAGQWEDAAKLRKLLRDRNIRKPAGCSSIEVDRIHHVFG 450


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