BLASTX nr result

ID: Glycyrrhiza23_contig00014922 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014922
         (756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610849.1| Protein SMG9 [Medicago truncatula] gi|355512...   322   7e-86
ref|XP_003538657.1| PREDICTED: protein SMG9-like [Glycine max]        308   8e-82
ref|XP_003516730.1| PREDICTED: protein SMG9-like [Glycine max]        306   2e-81
ref|XP_003614953.1| Protein SMG9 [Medicago truncatula] gi|355516...   270   2e-70
ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera] gi|...   242   5e-62

>ref|XP_003610849.1| Protein SMG9 [Medicago truncatula] gi|355512184|gb|AES93807.1|
           Protein SMG9 [Medicago truncatula]
          Length = 396

 Score =  322 bits (824), Expect = 7e-86
 Identities = 159/211 (75%), Positives = 169/211 (80%)
 Frame = -2

Query: 755 VLLASICHILLVVSEGVHDDSMWQLMLTVDLLKHGIXXXXXXXXXXXXXXXXXLEKDNKV 576
           V LAS+CHILLVVSEG+HDDS+W LM TVDLLKHGI                  + DNKV
Sbjct: 186 VFLASVCHILLVVSEGIHDDSLWHLMSTVDLLKHGISDPSLLASSLSQNSSSGHDSDNKV 245

Query: 575 PEREYMATPVFVHTKLQDPGVAPKNMLHLRKALMQYFKSSSFVREHTGNKPNEHVSASMV 396
           PE EYMATPVFVHTKLQD    PKN L LRKALMQYFK SSFV E+TG KP+ HV  SMV
Sbjct: 246 PEFEYMATPVFVHTKLQDQEFTPKNCLQLRKALMQYFKPSSFVGENTGKKPSNHVPPSMV 305

Query: 395 HGSHMDPGVLNLFAIPFKKKDENPRARHESYISALWKLRDQILSMKSPSFTRPLSEREWL 216
           HGS +D   LNLF IPFKKK+ENPRA+HESYISALWKLRDQILSMKSPSF RP+SEREWL
Sbjct: 306 HGSPLDSDTLNLFTIPFKKKEENPRAQHESYISALWKLRDQILSMKSPSFRRPVSEREWL 365

Query: 215 KNSAKIWEQVKNSPTILEYCRTLQHSGMYRR 123
           KNSAKIWEQVK SPTILEYCRTLQHSGMYRR
Sbjct: 366 KNSAKIWEQVKKSPTILEYCRTLQHSGMYRR 396


>ref|XP_003538657.1| PREDICTED: protein SMG9-like [Glycine max]
          Length = 393

 Score =  308 bits (789), Expect = 8e-82
 Identities = 154/211 (72%), Positives = 166/211 (78%)
 Frame = -2

Query: 755 VLLASICHILLVVSEGVHDDSMWQLMLTVDLLKHGIXXXXXXXXXXXXXXXXXLEKDNKV 576
           VLLASICHI+LVVSEG+HDDSMW LMLTVDLLKHGI                  EKD   
Sbjct: 184 VLLASICHIVLVVSEGIHDDSMWHLMLTVDLLKHGISDPSLMTSLSQSSSSGL-EKDKLP 242

Query: 575 PEREYMATPVFVHTKLQDPGVAPKNMLHLRKALMQYFKSSSFVREHTGNKPNEHVSASMV 396
              EYMATPVFVHTKLQD    P N + LRKALMQYF+ S FVREHT NKP EHVS+S V
Sbjct: 243 EHEEYMATPVFVHTKLQDQDFTPSNSVQLRKALMQYFRPSYFVREHTENKPEEHVSSSPV 302

Query: 395 HGSHMDPGVLNLFAIPFKKKDENPRARHESYISALWKLRDQILSMKSPSFTRPLSEREWL 216
           HGS MD  ++  +AIP KKKDENPRA+HESY+SALWKLRDQILSMKSPSFTRP+SEREWL
Sbjct: 303 HGSQMDSNMIKFYAIPLKKKDENPRAQHESYVSALWKLRDQILSMKSPSFTRPVSEREWL 362

Query: 215 KNSAKIWEQVKNSPTILEYCRTLQHSGMYRR 123
           KNSAKIWE VK+SPTILEYCRTLQHSGMY R
Sbjct: 363 KNSAKIWELVKSSPTILEYCRTLQHSGMYGR 393


>ref|XP_003516730.1| PREDICTED: protein SMG9-like [Glycine max]
          Length = 392

 Score =  306 bits (785), Expect = 2e-81
 Identities = 155/211 (73%), Positives = 166/211 (78%)
 Frame = -2

Query: 755 VLLASICHILLVVSEGVHDDSMWQLMLTVDLLKHGIXXXXXXXXXXXXXXXXXLEKDNKV 576
           VLLASICHILLVVSEGVHDDS+W LMLTVDLLKHGI                 LEKD   
Sbjct: 184 VLLASICHILLVVSEGVHDDSLWHLMLTVDLLKHGISDPSLMTSSLSQSSSSGLEKDKLP 243

Query: 575 PEREYMATPVFVHTKLQDPGVAPKNMLHLRKALMQYFKSSSFVREHTGNKPNEHVSASMV 396
              EYMATPVFVHTKLQD    P N + LRKALMQYF+ SSFVRE   NKP EHVS+S+V
Sbjct: 244 EHEEYMATPVFVHTKLQDQDFTPSNFVQLRKALMQYFRPSSFVREQ--NKPEEHVSSSLV 301

Query: 395 HGSHMDPGVLNLFAIPFKKKDENPRARHESYISALWKLRDQILSMKSPSFTRPLSEREWL 216
            GS MD  ++  +AIP KKKDENP A+HESY+SALWKLRDQILSMKSPSFTRP+SEREWL
Sbjct: 302 RGSQMDSNLIKFYAIPLKKKDENPSAQHESYVSALWKLRDQILSMKSPSFTRPVSEREWL 361

Query: 215 KNSAKIWEQVKNSPTILEYCRTLQHSGMYRR 123
           KNSAKIWEQVKNS TILEYCRTLQHSGMYRR
Sbjct: 362 KNSAKIWEQVKNSATILEYCRTLQHSGMYRR 392


>ref|XP_003614953.1| Protein SMG9 [Medicago truncatula] gi|355516288|gb|AES97911.1|
           Protein SMG9 [Medicago truncatula]
          Length = 394

 Score =  270 bits (690), Expect = 2e-70
 Identities = 142/214 (66%), Positives = 161/214 (75%), Gaps = 4/214 (1%)
 Frame = -2

Query: 755 VLLASICHILLVVSEGVHDDSMWQLMLT----VDLLKHGIXXXXXXXXXXXXXXXXXLEK 588
           V LASICHILLVVSEGV D+SMW LM      VDLLKH I                 +EK
Sbjct: 181 VFLASICHILLVVSEGVLDNSMWHLMFMIFADVDLLKHDISDPSLLASSLSQSSNSGIEK 240

Query: 587 DNKVPEREYMATPVFVHTKLQDPGVAPKNMLHLRKALMQYFKSSSFVREHTGNKPNEHVS 408
           DNKVPEREY+ATPVF+HTKLQ   ++P+ +  L KALM  FKSSSFVRE+TGN P+EH S
Sbjct: 241 DNKVPEREYLATPVFIHTKLQGRELSPRIVWLLSKALMHDFKSSSFVRENTGNNPDEH-S 299

Query: 407 ASMVHGSHMDPGVLNLFAIPFKKKDENPRARHESYISALWKLRDQILSMKSPSFTRPLSE 228
           +S  H + MD   L LFAIPFKKK++NPR +HESYISALWKLRDQILSMK PSF RP+SE
Sbjct: 300 SSKFHNTDMDSNPLKLFAIPFKKKEDNPRVQHESYISALWKLRDQILSMKPPSFKRPVSE 359

Query: 227 REWLKNSAKIWEQVKNSPTILEYCRTLQHSGMYR 126
           REWLK+SAKIWEQV+NS TI EY R LQHSG+YR
Sbjct: 360 REWLKSSAKIWEQVRNSSTISEYGRALQHSGIYR 393


>ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera]
           gi|297737327|emb|CBI26528.3| unnamed protein product
           [Vitis vinifera]
          Length = 419

 Score =  242 bits (618), Expect = 5e-62
 Identities = 123/218 (56%), Positives = 157/218 (72%), Gaps = 7/218 (3%)
 Frame = -2

Query: 755 VLLASICHILLVVSEGVHDDSMWQLMLTVDLLKHGIXXXXXXXXXXXXXXXXXLEKD--N 582
           VLLASICHILLV+S+GVHD +MW+LMLTVDLLKHGI                  +K+  +
Sbjct: 202 VLLASICHILLVISDGVHDINMWRLMLTVDLLKHGIPDLSSLTPSHSQNSNLGSDKEGKD 261

Query: 581 KVPE--REYMATPVFVHTKLQDPGVAPKNMLHLRKALMQYFKSSSFVREHTGNKPNEHVS 408
           KV E   EY+A P+FVHTKL+D  + P+N +HLRKAL Q+F SS+FV+E  GN   EH+ 
Sbjct: 262 KVLEGGEEYLAAPIFVHTKLRDQDITPRNFVHLRKALAQFFSSSTFVKEKCGNTTKEHLV 321

Query: 407 ASM---VHGSHMDPGVLNLFAIPFKKKDENPRARHESYISALWKLRDQILSMKSPSFTRP 237
           +S+   +  + +D  + NLF +P K K ++PRA++ESY S LWKLRDQ+LSM  PSF R 
Sbjct: 322 SSVPPNMPSTDLDSTLPNLFLVPCKSKVDSPRAQYESYTSMLWKLRDQVLSMNCPSFART 381

Query: 236 LSEREWLKNSAKIWEQVKNSPTILEYCRTLQHSGMYRR 123
           +SER+WL+NSAKIWE VKNSP I EYC+TLQ SGM+RR
Sbjct: 382 ISERDWLRNSAKIWELVKNSPIIAEYCKTLQSSGMFRR 419


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