BLASTX nr result

ID: Glycyrrhiza23_contig00014903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014903
         (975 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g...   131   4e-40
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...   120   6e-27
gb|AAM09536.1| reverse transcriptase [Medicago sativa]                119   1e-24
gb|ABD32279.2| reverse transcriptase, putative [Medicago truncat...   103   2e-21
gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    79   1e-17

>ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
           gi|355506707|gb|AES87849.1| GDSL esterase/lipase
           [Medicago truncatula]
          Length = 1004

 Score =  131 bits (329), Expect(2) = 4e-40
 Identities = 59/146 (40%), Positives = 85/146 (58%)
 Frame = -3

Query: 730 DNSAWLLGDGKTIKFWSDHWLNQPILDWTHIPPHAHHNFSATVSDFIEGRSWHIPPILES 551
           DNS WLLG+G+ IKFW D W  +P+ +  ++    +  +   V D+I+   WHIP  +  
Sbjct: 2   DNSKWLLGNGRLIKFWEDAWCGEPLHETLNVNQDIYREYPQFVHDYIQNFRWHIPQTILV 61

Query: 550 RFPDLVASIKKIIIPWTSGPDQLRWSHSLSGILTFKEAYAFCSPHSQVVPWCKLIWKSCI 371
            +P L    +K+ IP     D+L W+H+ +G L  +++YAF +       W KLIW   I
Sbjct: 62  HYPALKLLAEKVTIPMEDKEDKLIWNHNSNGDLMMRDSYAFKNQPVNTHNWAKLIWSKDI 121

Query: 370 PPSKSFLFWRLLHRGMPTDDNLQARG 293
           PPSKS L WRL+H  +PTD+ LQ RG
Sbjct: 122 PPSKSILTWRLIHDKVPTDEKLQQRG 147



 Score = 60.8 bits (146), Expect(2) = 4e-40
 Identities = 27/57 (47%), Positives = 35/57 (61%)
 Frame = -1

Query: 282 SVCSLCGNAYETADHLFHFCPFAGGIWHWLQGALNCTLNLSSFDAILNICNRGWSTQ 112
           S+CSLCG   ET+ HLF  C FA  IW W    L+ +L+  S   I ++C+RGWS Q
Sbjct: 152 SMCSLCGTHVETSFHLFFECCFAFRIWCWFASVLDSSLHFQSIPDIWSVCDRGWSPQ 208


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score =  120 bits (302), Expect(2) = 6e-27
 Identities = 54/155 (34%), Positives = 91/155 (58%)
 Frame = -3

Query: 892  NEAASLKLCWGMLADSGQWARFLRAQFLGKGVPSVHYVRSSLWPALRKNLATVTDNSAWL 713
            N AA LKL W +L+ + QWA  L+ +F  +G P  ++V+SS+W  ++ +++ +  N  W+
Sbjct: 799  NNAAMLKLAWNLLSSNSQWAVLLKRRFFSQGQPIRYFVKSSVWHGVKNHMSILRQNKLWI 858

Query: 712  LGDGKTIKFWSDHWLNQPILDWTHIPPHAHHNFSATVSDFIEGRSWHIPPILESRFPDLV 533
            +G G  I  W+++WL +P++   +I P  H +F+  VS+ I   +W +P  L    P++ 
Sbjct: 859  VGTGDRINLWTNNWLGEPLVTLFNIDPFFHASFTGKVSEVIVNGNWDLPASL--LVPEVT 916

Query: 532  ASIKKIIIPWTSGPDQLRWSHSLSGILTFKEAYAF 428
            + +  I +P T  PD L W+HS  G LT K A +F
Sbjct: 917  SRLASITLPRTELPDSLVWTHSADGQLTSKHAVSF 951



 Score = 26.9 bits (58), Expect(2) = 6e-27
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 974 KVVTVAWHKVCTPMAEGG 921
           KV TV+W  +C P +EGG
Sbjct: 772 KVCTVSWKILCRPWSEGG 789


>gb|AAM09536.1| reverse transcriptase [Medicago sativa]
          Length = 168

 Score =  119 bits (298), Expect = 1e-24
 Identities = 52/139 (37%), Positives = 79/139 (56%)
 Frame = -3

Query: 892 NEAASLKLCWGMLADSGQWARFLRAQFLGKGVPSVHYVRSSLWPALRKNLATVTDNSAWL 713
           N A+ L L W ++  + QWA   R +FL    P  HY+ SS+WP L+ N+  +  +S W 
Sbjct: 26  NRASLLLLTWKLITSNEQWAHICRVRFLNNYTPKSHYITSSVWPGLKSNIQYIFYHSIWT 85

Query: 712 LGDGKTIKFWSDHWLNQPILDWTHIPPHAHHNFSATVSDFIEGRSWHIPPILESRFPDLV 533
           +G+G+ I+FWSD WL+ PI +  +IPP    +    V+DFI   +W +P  ++ + P L 
Sbjct: 86  VGNGRNIRFWSDKWLDSPIAEHWNIPPSLISDIELKVNDFIVNGTWCLPDYIQQKDPALA 145

Query: 532 ASIKKIIIPWTSGPDQLRW 476
           A I+ I +P    PD L W
Sbjct: 146 AKIQSITLPVDDIPDVLHW 164


>gb|ABD32279.2| reverse transcriptase, putative [Medicago truncatula]
          Length = 480

 Score =  103 bits (256), Expect(2) = 2e-21
 Identities = 48/142 (33%), Positives = 77/142 (54%)
 Frame = -3

Query: 892 NEAASLKLCWGMLADSGQWARFLRAQFLGKGVPSVHYVRSSLWPALRKNLATVTDNSAWL 713
           NE+  L L W       QWA  +  +FL  G P  HY  SS+W  ++++L+T++ NS W+
Sbjct: 336 NESLILLLAWQFSTADSQWAALMHHRFLKHGTPLQHYFLSSMWGGIKEHLSTISSNSIWI 395

Query: 712 LGDGKTIKFWSDHWLNQPILDWTHIPPHAHHNFSATVSDFIEGRSWHIPPILESRFPDLV 533
           +G G  I  W+D+WL   ++D  +I P  H  F A+V+D I   +  +P    +  PD+ 
Sbjct: 396 VGTGANINLWTDNWLGIRLVDSLNISPTLHTKFRASVADVIVNGALSLPAAALA-VPDIA 454

Query: 532 ASIKKIIIPWTSGPDQLRWSHS 467
           + +  +++P    PD L W HS
Sbjct: 455 SRVACLVLPTAPLPDALVWLHS 476



 Score = 26.2 bits (56), Expect(2) = 2e-21
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 974 KVVTVAWHKVCTPMAEGG 921
           KV TV+W  +C P A GG
Sbjct: 309 KVCTVSWKVMCRPWAAGG 326


>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 79.3 bits (194), Expect(2) = 1e-17
 Identities = 36/104 (34%), Positives = 58/104 (55%)
 Frame = -3

Query: 604 VSDFIEGRSWHIPPILESRFPDLVASIKKIIIPWTSGPDQLRWSHSLSGILTFKEAYAFC 425
           V++++    W +      +   LV  I +I +P     D+L W+ S+ G L+ K A++F 
Sbjct: 3   VANYLVNGEWILSDFFAYKDNALVEKIHQIALPLDETLDKLIWTDSVDGDLSNKLAFSFL 62

Query: 424 SPHSQVVPWCKLIWKSCIPPSKSFLFWRLLHRGMPTDDNLQARG 293
             H   V W K++W +  PP+ +F+ WR LH  +PTDDNL+ RG
Sbjct: 63  PGHGPTVHWAKMLWNAYTPPTGAFITWRFLHNKLPTDDNLRKRG 106



 Score = 37.0 bits (84), Expect(2) = 1e-17
 Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = -1

Query: 303 KPGGVTVSVCS-LCGNAYETADHLFHFCPFAGGIWHWLQGALNCTLNLSSFDAILNI 136
           K G   VS+C   C    ET+ H+F  CP    +W WL  A +  L+ SS   ILNI
Sbjct: 104 KRGCYIVSICCCFCRKQAETSSHIFLQCPVTLQLWDWLLKATDQHLDFSS---ILNI 157