BLASTX nr result
ID: Glycyrrhiza23_contig00014854
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00014854
(1821 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003523552.1| PREDICTED: zinc finger CCCH domain-containin... 539 e-150
ref|XP_003527663.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 521 e-145
gb|AFK47452.1| unknown [Lotus japonicus] 518 e-144
ref|XP_003589157.1| Zinc finger CCCH domain-containing protein [... 484 e-134
gb|AFK34225.1| unknown [Medicago truncatula] 478 e-132
>ref|XP_003523552.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like [Glycine
max]
Length = 430
Score = 539 bits (1388), Expect = e-150
Identities = 290/432 (67%), Positives = 320/432 (74%), Gaps = 4/432 (0%)
Frame = +2
Query: 254 MRRLQNSKRVSWASDLDLCQVRLFLSEDSPFQVGLNSQDHLQAKTSLLLPPGGAGSDDIL 433
MRRLQ K+VSWASDLDLCQVRLFLSE+SP QVGLNSQD+LQAKTSL L PGGAGSDDIL
Sbjct: 1 MRRLQTLKQVSWASDLDLCQVRLFLSEESPSQVGLNSQDNLQAKTSLSLRPGGAGSDDIL 60
Query: 434 PPGFEGTHASSQFDIKPSQIPIIRWINPPKIVLNLKWQVVAGEESKEVEDQHQRELRVLE 613
PPGFEGTHASSQF+IKPSQIP+I+WI P KIVLN+ W+VV+GEESKE EDQ QRE+RVLE
Sbjct: 61 PPGFEGTHASSQFEIKPSQIPVIKWITPQKIVLNVTWRVVSGEESKEAEDQCQREMRVLE 120
Query: 614 AXXXXXXXXXXXXXXXXXXEDSHYIDDQTALIPITPIEDEDAATDTLSNSLKQFDVSQSL 793
A E+ H ID QT LIPITP+EDEDAA +TLS SL+ F VSQSL
Sbjct: 121 AIYPRISSIPLNPSVSMDVEEFHCIDGQTTLIPITPVEDEDAAAETLSYSLEPFHVSQSL 180
Query: 794 DFPAGVLKASNSATGMQLAHGL-XXXXXXXXXXLTSIVKGSEHGNLIDHGLLNNILNNPE 970
+GVLK SNSAT MQLA GL LT++VK +EHGN +DH LLNNILNNPE
Sbjct: 181 QLASGVLKDSNSATSMQLACGLASDVAVAASVALTNLVKSNEHGNFVDHELLNNILNNPE 240
Query: 971 VIEKLVRDYGVTNNPQHVHNVGSSSVA-SSHPIPINQGETTAPXXXXXXXXXXYTDPTGG 1147
VIEKLV DYG NN Q+VHN GSS A S+ PIPI QG+TT P YT P GG
Sbjct: 241 VIEKLVGDYGAINNSQYVHNAGSSLAAFSNPPIPI-QGQTTTPSSVVFSTTSSYTPPIGG 299
Query: 1148 QVATITNQWHPRP-XXXXXXXXXXXXXXTRDVNYYKSLIQQHGGDKQEPLPSSSNRQIQQ 1324
Q +T QW PRP RDVNYYKSLIQQHGG K E LP SS RQI Q
Sbjct: 300 QAEPVTTQWPPRPAVSSAIVSSPIEVPPARDVNYYKSLIQQHGGHK-ETLPYSSKRQIPQ 358
Query: 1325 PSTNYETT-HNFRTKGSKPKIMKPCIFFNSSRGCRNGANCAYQHDSSFRPQGNAVSGIQS 1501
+TNYETT +N R K SKPKIMKPCIFFNSSRGCRNGANCAYQHD+SF+P+GN VSGIQS
Sbjct: 359 AATNYETTSYNHRGKVSKPKIMKPCIFFNSSRGCRNGANCAYQHDASFQPRGNTVSGIQS 418
Query: 1502 SKRMKMDNEISS 1537
SKRMKMD+EIS+
Sbjct: 419 SKRMKMDHEISN 430
>ref|XP_003527663.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 6-like [Glycine max]
Length = 431
Score = 521 bits (1343), Expect = e-145
Identities = 282/432 (65%), Positives = 311/432 (71%), Gaps = 4/432 (0%)
Frame = +2
Query: 254 MRRLQNSKRVSWASDLDLCQVRLFLSEDSPFQVGLNSQDHLQAKTSLLLPPGGAGSDDIL 433
MRRLQ SKRVSWASDLDLCQVRLFLSE+SP QVGLNSQDH+QAKTSLLL P GAGSDDIL
Sbjct: 1 MRRLQKSKRVSWASDLDLCQVRLFLSEESPSQVGLNSQDHVQAKTSLLLHPDGAGSDDIL 60
Query: 434 PPGFEGTHASSQFDIKPSQIPIIRWINPPKIVLNLKWQVVAGEESKEVEDQHQRELRVLE 613
PPGFEGTHA SQ +IK SQIP+I+WI PPKI +N W+V GEES EVEDQ QRE+RVLE
Sbjct: 61 PPGFEGTHAKSQSEIKLSQIPVIKWITPPKIEVNPTWRVAVGEESTEVEDQPQREMRVLE 120
Query: 614 AXXXXXXXXXXXXXXXXXXEDSHYIDDQTALIPITPIEDEDAATDTLSNSLKQFDVSQSL 793
A E+SH +DDQTALIPITPIE+E+AA L +SLK FDVSQSL
Sbjct: 121 AIYPRISSIPQNPSVSMDVEESHCMDDQTALIPITPIEEEEAAAKALMDSLKPFDVSQSL 180
Query: 794 DFPAGVLKASNSATGMQLAHGL-XXXXXXXXXXLTSIVKGSEHGNLIDHGLLNNILNNPE 970
G+LK SNSAT MQLA GL LTS+VK +EHGN IDH +N+ILNNPE
Sbjct: 181 QLAPGILKDSNSATSMQLACGLASDVVAAAFVALTSLVKRNEHGNFIDHESVNHILNNPE 240
Query: 971 VIEKLVRDYGVTNNPQHVHNVGSSSVASSHP-IPINQGETTAPXXXXXXXXXXYTDPTGG 1147
VI KLVRDY NN Q+VHN GSS A S+P IPI QGETT P Y P GG
Sbjct: 241 VIVKLVRDYRAANNSQYVHNAGSSLAAFSNPSIPI-QGETTTPSSVVFSGTSSYAPPIGG 299
Query: 1148 QVATITNQWHPRP-XXXXXXXXXXXXXXTRDVNYYKSLIQQHGGDKQEPLPSSSNRQIQQ 1324
V IT QW PRP R+VNYYKSLIQQHGGDKQE LP SS RQI Q
Sbjct: 300 LVEPITTQWPPRPAMSSAIVSSSIEVPPARNVNYYKSLIQQHGGDKQETLPYSSKRQIPQ 359
Query: 1325 PSTNYETT-HNFRTKGSKPKIMKPCIFFNSSRGCRNGANCAYQHDSSFRPQGNAVSGIQS 1501
+TNYETT +N R K SKPKIMKPCIFFN+S+GCR GANC Y HD+SF P+GN VSGIQS
Sbjct: 360 SATNYETTSYNHRGKVSKPKIMKPCIFFNTSKGCRKGANCDYHHDASFXPRGNTVSGIQS 419
Query: 1502 SKRMKMDNEISS 1537
SKR+KMD+EISS
Sbjct: 420 SKRIKMDHEISS 431
>gb|AFK47452.1| unknown [Lotus japonicus]
Length = 418
Score = 518 bits (1333), Expect = e-144
Identities = 273/423 (64%), Positives = 306/423 (72%), Gaps = 2/423 (0%)
Frame = +2
Query: 275 KRVSWASDLDLCQVRLFLSEDSPFQVGLNSQDHLQAKTSLLLPPGGAGSDDILPPGFEGT 454
+RVSWASD +LCQVRLFLS++SP QVGLNSQDHLQAKTSLLL PGGAGSDD LPPGFEGT
Sbjct: 6 RRVSWASDFNLCQVRLFLSDESPSQVGLNSQDHLQAKTSLLLHPGGAGSDDSLPPGFEGT 65
Query: 455 HASSQFDIKPSQIPIIRWINPPKIVLNLKWQVVAGEESKEVEDQHQRELRVLEAXXXXXX 634
HASSQF+I S+IP+I W PPKIVLNL WQVVAGEESKEVEDQH+RELRVLEA
Sbjct: 66 HASSQFEINLSRIPVISWTRPPKIVLNLTWQVVAGEESKEVEDQHKRELRVLEAIYPRIS 125
Query: 635 XXXXXXXXXXXXEDSHYIDDQTALIPITPIEDEDAATDTLSNSLKQFDVSQSLDFPAGVL 814
E+SH+ID Q LIPITPIED+DA DT+SN VSQSL+ P G+L
Sbjct: 126 SIPSNPAVSVDVENSHHIDGQIPLIPITPIEDDDAVADTVSN------VSQSLEQPTGIL 179
Query: 815 KASNSATGMQLAHGLXXXXXXXXXXLTSIVKGSEHGNLIDHGLLNNILNNPEVIEKLVRD 994
K S+SAT M LA GL LT+IVK +E GNLIDH LL NIL +PEVIEKLVRD
Sbjct: 180 KVSSSATNMHLAGGLGSDVAAAAAALTNIVKSNERGNLIDHELLKNILRSPEVIEKLVRD 239
Query: 995 YGVTNNPQHVHNVGSSSVASSH-PIPINQGETTAPXXXXXXXXXXYTDPTGGQVATITNQ 1171
YGVTNN Q+VHNVG SS A S PI NQGE Y PTGGQ A+++ Q
Sbjct: 240 YGVTNNSQYVHNVGPSSAAFSRPPIATNQGENA----LLSSVTSSYIHPTGGQAASVSTQ 295
Query: 1172 WHPRPXXXXXXXXXXXXXXT-RDVNYYKSLIQQHGGDKQEPLPSSSNRQIQQPSTNYETT 1348
W PRP + +D NYYKSLIQQHGGDKQE P SS+ QIQQP YET
Sbjct: 296 WVPRPVVNSVSVASPVEVPSKKDANYYKSLIQQHGGDKQETFPYSSSNQIQQPVNQYETA 355
Query: 1349 HNFRTKGSKPKIMKPCIFFNSSRGCRNGANCAYQHDSSFRPQGNAVSGIQSSKRMKMDNE 1528
+N R K +PKIMKPCIFFNSSRGCRNGANC+YQHD+SF+ +G+ VSGIQSSKRMK+DNE
Sbjct: 356 YNPRAKALRPKIMKPCIFFNSSRGCRNGANCSYQHDASFQQRGSTVSGIQSSKRMKLDNE 415
Query: 1529 ISS 1537
ISS
Sbjct: 416 ISS 418
>ref|XP_003589157.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355478205|gb|AES59408.1| Zinc finger CCCH
domain-containing protein [Medicago truncatula]
Length = 412
Score = 484 bits (1246), Expect = e-134
Identities = 269/433 (62%), Positives = 296/433 (68%), Gaps = 5/433 (1%)
Frame = +2
Query: 254 MRRLQNSKRVSWASDLDLCQVRLFLSEDSPFQVGLNSQDHLQAKTSLLLPPGGAGSDDIL 433
MR L+ SKRVSW S+LDLCQVRLFLSE+SP QVGLNSQDHLQ K S LLP G AGSDDIL
Sbjct: 1 MRGLRKSKRVSWPSELDLCQVRLFLSEESPSQVGLNSQDHLQEKISSLLPQGEAGSDDIL 60
Query: 434 PPGFEGTHASSQFDIKPSQIPIIRWINPPKIVLNLKWQVVAGEESKEVEDQHQRELRVLE 613
PPGFEGTH SSQFDIK S IP+I WI PPKIVL+L WQVVAGEESKE+ DQHQRE+RVLE
Sbjct: 61 PPGFEGTHTSSQFDIKLSDIPVISWIKPPKIVLDLTWQVVAGEESKEIFDQHQREMRVLE 120
Query: 614 AXXXXXXXXXXXXXXXXXXEDSHYIDDQTALIPITPIEDEDAATDTLSNSLKQFDVSQSL 793
A +DSHYID +IPITP+ED D DTLS
Sbjct: 121 A-IYPRISSIPPNPISVDVDDSHYIDGHIVVIPITPVEDGDVGADTLS------------ 167
Query: 794 DFPAGVLKASNSATGMQLAHGLXXXXXXXXXXLTSIVKGSEHGNLIDHGLLNNILNNPEV 973
G+L SN+ T M + + LTS+VK SEHGNLID LLNNILNNPEV
Sbjct: 168 ---PGILDGSNTVTTMSMVSDV----AAASVALTSLVKSSEHGNLIDPELLNNILNNPEV 220
Query: 974 IEKLVRDYGVTNNPQHVHNVGSSSVASSH-PIPINQGETTAPXXXXXXXXXXYTDPTGGQ 1150
IEKLVR+Y V N Q+ N GSSS SH P P NQ ETT YT TGGQ
Sbjct: 221 IEKLVRNYNV-QNAQYAQNTGSSSNVFSHPPNPFNQVETTTSSSNAFSSTSSYTHTTGGQ 279
Query: 1151 VA-TITNQWHPRP-XXXXXXXXXXXXXXTRDVNYYKSLIQQHGGDKQEPLP-SSSNRQIQ 1321
+A T++ QWH RP T+DVNYYKSLIQQHGGDKQE LP SSSNRQ Q
Sbjct: 280 MAPTMSTQWHRRPEISSAIAATPVEVPSTKDVNYYKSLIQQHGGDKQEALPYSSSNRQNQ 339
Query: 1322 QPSTNYETTHNFRTKGSKPKIMKPCIFFNSSRGCRNGANCAYQHDSSFRP-QGNAVSGIQ 1498
QP +NY+T HNFR KGSKPKI KPCIFFNSSRGCRNGANC +QHD+SF+P QGN SG+
Sbjct: 340 QPLSNYDTVHNFRAKGSKPKISKPCIFFNSSRGCRNGANCTFQHDASFQPQQGNPSSGMH 399
Query: 1499 SSKRMKMDNEISS 1537
SSKRMKMDNEISS
Sbjct: 400 SSKRMKMDNEISS 412
>gb|AFK34225.1| unknown [Medicago truncatula]
Length = 412
Score = 478 bits (1229), Expect = e-132
Identities = 266/433 (61%), Positives = 295/433 (68%), Gaps = 5/433 (1%)
Frame = +2
Query: 254 MRRLQNSKRVSWASDLDLCQVRLFLSEDSPFQVGLNSQDHLQAKTSLLLPPGGAGSDDIL 433
MR L+ SKRVSW S+LDLCQVRLFLS++SP QVGLNSQDHLQ K S LLP G AGSDDIL
Sbjct: 1 MRGLRKSKRVSWPSELDLCQVRLFLSDESPSQVGLNSQDHLQEKISSLLPQGEAGSDDIL 60
Query: 434 PPGFEGTHASSQFDIKPSQIPIIRWINPPKIVLNLKWQVVAGEESKEVEDQHQRELRVLE 613
PPGFEGTH SSQFDIK S IP+I WI PPKIVL+L WQVVAGEESKE+ DQHQRE+RVLE
Sbjct: 61 PPGFEGTHTSSQFDIKLSDIPVISWIKPPKIVLDLTWQVVAGEESKEIFDQHQREMRVLE 120
Query: 614 AXXXXXXXXXXXXXXXXXXEDSHYIDDQTALIPITPIEDEDAATDTLSNSLKQFDVSQSL 793
A +DSHYID +IPIT +ED D DTLS
Sbjct: 121 A-IYPRISSIPPNPISVDVDDSHYIDGHIVVIPITLVEDGDVGADTLS------------ 167
Query: 794 DFPAGVLKASNSATGMQLAHGLXXXXXXXXXXLTSIVKGSEHGNLIDHGLLNNILNNPEV 973
G+L SN+ T M + + LTS+VK SEHGNLID LLNNILNNPEV
Sbjct: 168 ---PGILDGSNTVTTMSMVSDV----AAASVALTSLVKSSEHGNLIDPELLNNILNNPEV 220
Query: 974 IEKLVRDYGVTNNPQHVHNVGSSSVASSH-PIPINQGETTAPXXXXXXXXXXYTDPTGGQ 1150
IEKLVR+Y V N Q+ N GSSS SH P P N+ ETT YT TGGQ
Sbjct: 221 IEKLVRNYNV-QNAQYAQNTGSSSNVFSHPPNPFNRVETTTSSSNAFSSTSSYTHTTGGQ 279
Query: 1151 VA-TITNQWHPRP-XXXXXXXXXXXXXXTRDVNYYKSLIQQHGGDKQEPLP-SSSNRQIQ 1321
+A T++ QWH RP T+DVNYYKSLIQQHGGDKQE LP SSSNRQ Q
Sbjct: 280 MAPTMSTQWHRRPEISSAIAATPVEVPSTKDVNYYKSLIQQHGGDKQEALPYSSSNRQNQ 339
Query: 1322 QPSTNYETTHNFRTKGSKPKIMKPCIFFNSSRGCRNGANCAYQHDSSFRP-QGNAVSGIQ 1498
QP +NY+T HNFR KGSKPKI KPCIFFNSSRGCRNGANC +QHD+SF+P QGN SG+
Sbjct: 340 QPLSNYDTVHNFRAKGSKPKISKPCIFFNSSRGCRNGANCTFQHDASFQPQQGNPSSGMH 399
Query: 1499 SSKRMKMDNEISS 1537
SSKRMKMDNEISS
Sbjct: 400 SSKRMKMDNEISS 412