BLASTX nr result

ID: Glycyrrhiza23_contig00014816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014816
         (1143 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299166.1| predicted protein [Populus trichocarpa] gi|2...   356   5e-96
ref|XP_002336150.1| predicted protein [Populus trichocarpa] gi|2...   356   7e-96
ref|XP_002270687.1| PREDICTED: probable E3 ubiquitin-protein lig...   339   7e-91
ref|XP_002512779.1| zinc finger protein, putative [Ricinus commu...   319   7e-85
ref|XP_003529853.1| PREDICTED: probable E3 ubiquitin-protein lig...   282   1e-73

>ref|XP_002299166.1| predicted protein [Populus trichocarpa] gi|222846424|gb|EEE83971.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  356 bits (914), Expect = 5e-96
 Identities = 167/316 (52%), Positives = 216/316 (68%), Gaps = 3/316 (0%)
 Frame = -3

Query: 997 EQQDSPFGLLAVDDFYFSALFDDVDEAG---LDAISDDKYANELQFQETLMASVITXXXX 827
           +Q  +P  L  VDDFYFSALFD+  E G   +  +SD KYA ELQFQETLM SVI     
Sbjct: 3   QQSLAPSELDFVDDFYFSALFDEEQEGGGGEIFEVSDAKYAEELQFQETLMGSVIVSQMK 62

Query: 826 XXXXXXXXXXXXXXXPCVASSSKAVDVSLVVPKIELVGEEEAIESLLIICEICVEPKESE 647
                            ++     V++      I+L    EA ES L  CEIC E KE++
Sbjct: 63  SIGPSPMMIEGIPVVLPISDQPMRVEI------IDL----EAGESSLSFCEICAERKEND 112

Query: 646 EMFRSQRCDHSFCSECVTKHVATKIQESITVVSCPGLYCEGVLELDACRPMLPNDLIERW 467
           +MF+++ C HSFC++C+++HVATK+Q++I +V+CPGL C  VLE+D CRP+L   +I+RW
Sbjct: 113 QMFKTESCVHSFCNDCISRHVATKVQDNIRIVTCPGLSCRAVLEMDTCRPVLTRGVIDRW 172

Query: 466 DDALCEALFLSAPKFYCPFRDCSAMMLLXXXXXXXXXEIRESECPFCHRLICARCHVPWH 287
           ++ALCE +  ++ +FYCPF+DCSA+++           IRESECPFCHRL CA+C VPWH
Sbjct: 173 ENALCEEMINASQRFYCPFKDCSALLV----DDNEGETIRESECPFCHRLFCAQCSVPWH 228

Query: 286 PGVCCEEFQTLNEDERGREDLLVRELASSKKWSRCPKCKFYVEKAEGCLHITCRCRFEFC 107
           PGV C+E+Q LNEDERGREDL+VRELA +K+W RCPKCKFYVE+ EGC H+ CRCRFEFC
Sbjct: 229 PGVDCDEYQRLNEDERGREDLMVRELAKNKQWGRCPKCKFYVERTEGCPHMVCRCRFEFC 288

Query: 106 YACGNQWTSSHGGCQR 59
           Y C  QW  +HGGC R
Sbjct: 289 YGCEEQWGPTHGGCTR 304


>ref|XP_002336150.1| predicted protein [Populus trichocarpa] gi|222874330|gb|EEF11461.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  356 bits (913), Expect = 7e-96
 Identities = 167/316 (52%), Positives = 215/316 (68%), Gaps = 3/316 (0%)
 Frame = -3

Query: 997 EQQDSPFGLLAVDDFYFSALFDDVDEAG---LDAISDDKYANELQFQETLMASVITXXXX 827
           +Q  +P  L  VDDFYFSALFD+  E G   +  +SD KYA ELQFQETLM SVI     
Sbjct: 3   QQSLAPSELDFVDDFYFSALFDEEQEGGGGEIFEVSDAKYAEELQFQETLMGSVIVSQMK 62

Query: 826 XXXXXXXXXXXXXXXPCVASSSKAVDVSLVVPKIELVGEEEAIESLLIICEICVEPKESE 647
                            ++     V++      I+L    EA ES L  CEIC E KE++
Sbjct: 63  SIGPSPMMIEGIPVVLPISDQPMRVEI------IDL----EAGESSLSFCEICAERKEND 112

Query: 646 EMFRSQRCDHSFCSECVTKHVATKIQESITVVSCPGLYCEGVLELDACRPMLPNDLIERW 467
           +MF+++ C HSFC++C+++HVATK+Q++I +V+CPGL C  VLE+D CRP+L   +I+RW
Sbjct: 113 QMFKTESCVHSFCNDCISRHVATKVQDNIRIVTCPGLSCRAVLEMDTCRPVLTRGVIDRW 172

Query: 466 DDALCEALFLSAPKFYCPFRDCSAMMLLXXXXXXXXXEIRESECPFCHRLICARCHVPWH 287
           ++ALCE +  ++ +FYCPF+DCSA+++           IRESECPFCHRL CA+C VPWH
Sbjct: 173 ENALCEEMINASQRFYCPFKDCSALLV----DDNEGETIRESECPFCHRLFCAQCSVPWH 228

Query: 286 PGVCCEEFQTLNEDERGREDLLVRELASSKKWSRCPKCKFYVEKAEGCLHITCRCRFEFC 107
           PGV C+E+Q LNEDERGREDL+VRELA  K+W RCPKCKFYVE+ EGC H+ CRCRFEFC
Sbjct: 229 PGVDCDEYQRLNEDERGREDLMVRELAKDKQWGRCPKCKFYVERTEGCPHMVCRCRFEFC 288

Query: 106 YACGNQWTSSHGGCQR 59
           Y C  QW  +HGGC R
Sbjct: 289 YGCEEQWGPTHGGCTR 304


>ref|XP_002270687.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A [Vitis
            vinifera] gi|298204735|emb|CBI25233.3| unnamed protein
            product [Vitis vinifera]
          Length = 301

 Score =  339 bits (870), Expect = 7e-91
 Identities = 164/315 (52%), Positives = 210/315 (66%)
 Frame = -3

Query: 1006 MAQEQQDSPFGLLAVDDFYFSALFDDVDEAGLDAISDDKYANELQFQETLMASVITXXXX 827
            MAQE   +    L VDDFYFSAL D +++     +SD KYA ELQFQE LMASV      
Sbjct: 1    MAQEPTSAH---LFVDDFYFSALLDQLEDTEDFVVSDAKYAEELQFQEALMASVEAASNT 57

Query: 826  XXXXXXXXXXXXXXXPCVASSSKAVDVSLVVPKIELVGEEEAIESLLIICEICVEPKESE 647
                              + SS A D ++ +  +E   E +  E+    CEIC E +  +
Sbjct: 58   AVQETAPSIKEIGSS---SGSSSAADAAVDMAVVE---EGQTSENF---CEICAERRGLD 108

Query: 646  EMFRSQRCDHSFCSECVTKHVATKIQESITVVSCPGLYCEGVLELDACRPMLPNDLIERW 467
            EMFRS +C H+FCS C++KHVA KIQES+ +V+CP L CEGVLE+D CR ++  +++E+W
Sbjct: 109  EMFRSGKCCHTFCSYCISKHVAVKIQESVRMVTCPALSCEGVLEVDDCRGIVAREVMEKW 168

Query: 466  DDALCEALFLSAPKFYCPFRDCSAMMLLXXXXXXXXXEIRESECPFCHRLICARCHVPWH 287
            ++  CE++  ++ +FYCPFRDCSAM++           IRESECP C RL CA C+VPWH
Sbjct: 169  EEVSCESIIAASQRFYCPFRDCSAMLV----DDNGGEVIRESECPVCRRLFCAACYVPWH 224

Query: 286  PGVCCEEFQTLNEDERGREDLLVRELASSKKWSRCPKCKFYVEKAEGCLHITCRCRFEFC 107
             GV CEE+Q +NEDE+GREDL++RELA  KKW RCP+CKFYVEK EGCLHITCRC ++FC
Sbjct: 225  SGVGCEEYQMMNEDEKGREDLMLRELAQEKKWRRCPQCKFYVEKIEGCLHITCRCTYQFC 284

Query: 106  YACGNQWTSSHGGCQ 62
            YACG QWT  HGGCQ
Sbjct: 285  YACGAQWTQHHGGCQ 299


>ref|XP_002512779.1| zinc finger protein, putative [Ricinus communis]
           gi|223547790|gb|EEF49282.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 308

 Score =  319 bits (818), Expect = 7e-85
 Identities = 156/307 (50%), Positives = 193/307 (62%), Gaps = 4/307 (1%)
 Frame = -3

Query: 964 VDDFYFSALFDDVDEAGLD----AISDDKYANELQFQETLMASVITXXXXXXXXXXXXXX 797
           VD FY SA+ D+ DE         ISD KYA  LQFQE LM SV+               
Sbjct: 12  VDAFYVSAIIDESDEEAQHDETFPISDAKYAEALQFQEALMGSVMISQMKNSITTATIIN 71

Query: 796 XXXXXPCVASSSKAVDVSLVVPKIELVGEEEAIESLLIICEICVEPKESEEMFRSQRCDH 617
                    SS   ++   VVP        E  +S  I CEICVE KE+++MF +  C H
Sbjct: 72  TCKISN--PSSLLMIEPPPVVPN----SPTETGQSSQIFCEICVEKKETDQMFATDSCIH 125

Query: 616 SFCSECVTKHVATKIQESITVVSCPGLYCEGVLELDACRPMLPNDLIERWDDALCEALFL 437
           SFC +CV K+V TKIQES T+V+CPG+ C  VLELD CR  L   +I+ W++ALC+ +  
Sbjct: 126 SFCLDCVGKYVGTKIQESQTIVTCPGMNCRAVLELDICRTKLAKGVIDSWEEALCKEMIS 185

Query: 436 SAPKFYCPFRDCSAMMLLXXXXXXXXXEIRESECPFCHRLICARCHVPWHPGVCCEEFQT 257
           +   FYCPFRDCSA+++           IRESECPFCHRL CA+C+VPWH G+ CE FQ 
Sbjct: 186 TLQSFYCPFRDCSALLV----NDNEGEVIRESECPFCHRLFCAQCYVPWHSGIECEAFQR 241

Query: 256 LNEDERGREDLLVRELASSKKWSRCPKCKFYVEKAEGCLHITCRCRFEFCYACGNQWTSS 77
           LNEDERGREDL+V ELA  KKWSRCPKC+FYVE+ +GC H+ CRC F+FCY C  +WT +
Sbjct: 242 LNEDERGREDLMVIELAKEKKWSRCPKCRFYVERTQGCPHMVCRCGFQFCYGCELEWTGN 301

Query: 76  HGGCQRN 56
           HGGC +N
Sbjct: 302 HGGCHKN 308


>ref|XP_003529853.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-like
           [Glycine max]
          Length = 303

 Score =  282 bits (722), Expect = 1e-73
 Identities = 141/306 (46%), Positives = 186/306 (60%), Gaps = 3/306 (0%)
 Frame = -3

Query: 970 LAVDDFYFSALFDDVDEAGLDAISDDKYANELQFQETLMASVITXXXXXXXXXXXXXXXX 791
           L VDDF+FSAL+D  +   +  ISD+KYA ELQ QE L +S ++                
Sbjct: 20  LLVDDFFFSALYDAEE---VFPISDEKYAEELQLQEVLYSSTVSSTGVTKEVIQID---- 72

Query: 790 XXXPCVASSSKAVDVSLVVPKIELVG--EEEAIESLLIICEICVEPKESEEMFRSQRCDH 617
                       VDV    P   L G  +E    S  + C IC++ K  EEMFR+Q C H
Sbjct: 73  ------------VDVDCDTPLRILKGKQKETGESSQQVYCGICMDAKYGEEMFRNQNCSH 120

Query: 616 SFCSECVTKHVATKIQESITVVSCPGLYCEGVLELDACRPMLPNDLIERWDDALCEALFL 437
           SFC +C+ ++VATK+QE+I++V CP   C+GV+E   CR  +P ++ +RW++ALCE L L
Sbjct: 121 SFCDDCIGRYVATKVQENISMVKCPHPKCKGVIEPQYCRSFIPKEVFDRWENALCENLVL 180

Query: 436 SAPKFYCPFRDCSAMMLLXXXXXXXXXEIRESECPFCHRLICARCHVPWHPGVCCEEFQT 257
            + KFYCPF+DCSA+++           +  SECP C+RL CA+C V WH GV C+EFQ 
Sbjct: 181 GSQKFYCPFKDCSAVLI-----NDAEEIVTVSECPHCNRLFCAQCKVSWHAGVDCKEFQN 235

Query: 256 LNEDERGREDLLVRELASSKKWSRCPKCKFYVEKAEGCLHITCRCRFEFCYACGNQWTSS 77
           L E ER REDL+V ELA +K W RCPKC FYVE+ +GC  ITCRC  EFCYACG+ W+  
Sbjct: 236 LKEYEREREDLMVMELAKNKSWKRCPKCIFYVERIDGCTRITCRCGNEFCYACGSSWSGG 295

Query: 76  -HGGCQ 62
            H  C+
Sbjct: 296 LHYECR 301


Top