BLASTX nr result

ID: Glycyrrhiza23_contig00014805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014805
         (1664 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242175.1| uncharacterized protein LOC100784201 [Glycin...   622   e-175
gb|ABK94828.1| unknown [Populus trichocarpa]                          500   e-139
ref|XP_002307583.1| predicted protein [Populus trichocarpa] gi|2...   498   e-138
ref|XP_004150129.1| PREDICTED: ribosome biogenesis GTPase A-like...   495   e-137
ref|XP_002271564.2| PREDICTED: ribosome biogenesis GTPase A-like...   495   e-137

>ref|NP_001242175.1| uncharacterized protein LOC100784201 [Glycine max]
            gi|255634965|gb|ACU17841.1| unknown [Glycine max]
          Length = 391

 Score =  622 bits (1603), Expect = e-175
 Identities = 314/391 (80%), Positives = 334/391 (85%), Gaps = 4/391 (1%)
 Frame = +3

Query: 123  MSVQLSGLWVPNSPSI----VPNRGRFXXXXXXXXXXXXXXXXXXXXXVGVKGPSWSENG 290
            MSVQLS LWVPNSP I    VPNRGRF                     +GV GPSW ENG
Sbjct: 1    MSVQLSSLWVPNSPPIPQHFVPNRGRFSASALSSQSPTIQI-------IGVGGPSWRENG 53

Query: 291  YANPNSNNTFDGCQGETDLWAELDTDLYHWTKALRPVQWFPGHIAKAXXXXXXXXXXMDV 470
            Y NPN+NN FDGCQGE+D W+ELDTDLYHWTKALRPVQWFPGHIAKA          MDV
Sbjct: 54   YGNPNNNNLFDGCQGESDHWSELDTDLYHWTKALRPVQWFPGHIAKAEKELKEQLKLMDV 113

Query: 471  VIEVRDGRIPMSTSHPQMDLWLGNRKRILVLNREDMISTADRNAWAAYFTRHGTKAVFSN 650
            VIEVRDGRIPMSTSHPQMD WLGNRKRILVLNREDMISTADRNAWA YFTR+GTK VFSN
Sbjct: 114  VIEVRDGRIPMSTSHPQMDPWLGNRKRILVLNREDMISTADRNAWADYFTRNGTKVVFSN 173

Query: 651  GQLGMGTMKLGRLAKELAADVNVKRRAKGLLPRPVRAGIVGYPNVGKSSLVNRLLKRRMC 830
            GQLGMGTMKLGRLAKELAADVNVKRR+KGLLPR VRAGIVGYPNVGKSSL+NRLLKRRMC
Sbjct: 174  GQLGMGTMKLGRLAKELAADVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMC 233

Query: 831  PAAPRPGVTRELKWVRFGKDLELLDSPGILPMRISDQSAAIKLAICDDIGERSYDVADVA 1010
            PAAPRPGVTREL+WVRFGKDLELLDSPGILPMRISDQSAAIKLAICDDIGERSYDVADVA
Sbjct: 234  PAAPRPGVTRELRWVRFGKDLELLDSPGILPMRISDQSAAIKLAICDDIGERSYDVADVA 293

Query: 1011 AILVQMLTKLPTVGGDALCKRYKIDVDSQCGKTFIEKLALQVFNGNVHQAAFRVLSDFRK 1190
            AILVQML+KLPTVG DALCKRYKIDVD + G+ FIEKLA++VFNG+VHQAAFRVL+DFRK
Sbjct: 294  AILVQMLSKLPTVGRDALCKRYKIDVDCRDGRIFIEKLAVRVFNGDVHQAAFRVLADFRK 353

Query: 1191 GRFGWTALERPPR*CQMFASSSVTPELEIML 1283
            G+FGWTALERPP+  QMFA  S T +LE+ +
Sbjct: 354  GKFGWTALERPPKWRQMFAFKSRTLKLELKI 384


>gb|ABK94828.1| unknown [Populus trichocarpa]
          Length = 367

 Score =  500 bits (1287), Expect = e-139
 Identities = 259/375 (69%), Positives = 283/375 (75%), Gaps = 6/375 (1%)
 Frame = +3

Query: 123  MSVQLSGLWVPNSPSIVPNRGRF-----XXXXXXXXXXXXXXXXXXXXXVGVKG-PSWSE 284
            M V++ GLW+PN P+I  NR  F                          VG K  PSW  
Sbjct: 1    MGVEVLGLWLPN-PAIRFNRPPFLHLSPPTRASLVTPASLSSPPPTIQIVGGKSTPSWQG 59

Query: 285  NGYANPNSNNTFDGCQGETDLWAELDTDLYHWTKALRPVQWFPGHIAKAXXXXXXXXXXM 464
            +G      N+   G   ETD W + +TDLYHWTK LRPVQW+PGHIAK           M
Sbjct: 60   SG------NDVCGGGGEETD-WYDFETDLYHWTKPLRPVQWYPGHIAKTEKELKEQLKLM 112

Query: 465  DVVIEVRDGRIPMSTSHPQMDLWLGNRKRILVLNREDMISTADRNAWAAYFTRHGTKAVF 644
            DVVIEVRD RIP+ST+HPQMD WLGNRKRILVLNREDMIS ADRNAWA YF R G K V 
Sbjct: 113  DVVIEVRDARIPLSTTHPQMDAWLGNRKRILVLNREDMISKADRNAWATYFARQGIKVVL 172

Query: 645  SNGQLGMGTMKLGRLAKELAADVNVKRRAKGLLPRPVRAGIVGYPNVGKSSLVNRLLKRR 824
            SNGQLGMGTMKL R AK LAA VNVKRR KGLLPRPVRAGIVGYPNVGKSSL+NRLLKRR
Sbjct: 173  SNGQLGMGTMKLSRFAKSLAASVNVKRREKGLLPRPVRAGIVGYPNVGKSSLINRLLKRR 232

Query: 825  MCPAAPRPGVTRELKWVRFGKDLELLDSPGILPMRISDQSAAIKLAICDDIGERSYDVAD 1004
            MCPAAPRPGVTREL+WVRFG DLELLDSPGI+PMRISDQSAAIKLAICDDIGERSYDV D
Sbjct: 233  MCPAAPRPGVTRELRWVRFGNDLELLDSPGIIPMRISDQSAAIKLAICDDIGERSYDVTD 292

Query: 1005 VAAILVQMLTKLPTVGGDALCKRYKIDVDSQCGKTFIEKLALQVFNGNVHQAAFRVLSDF 1184
            VAAILVQ+LTKLPTVG  AL  RYK+D D  CGK F++KL++ +FNG+ HQAAFR+LSDF
Sbjct: 293  VAAILVQILTKLPTVGAKALNNRYKMDADDFCGKIFVQKLSVHLFNGDTHQAAFRILSDF 352

Query: 1185 RKGRFGWTALERPPR 1229
            RKG+FGW ALERPPR
Sbjct: 353  RKGKFGWAALERPPR 367


>ref|XP_002307583.1| predicted protein [Populus trichocarpa] gi|222857032|gb|EEE94579.1|
            predicted protein [Populus trichocarpa]
          Length = 387

 Score =  498 bits (1282), Expect = e-138
 Identities = 258/374 (68%), Positives = 282/374 (75%), Gaps = 6/374 (1%)
 Frame = +3

Query: 123  MSVQLSGLWVPNSPSIVPNRGRF-----XXXXXXXXXXXXXXXXXXXXXVGVKG-PSWSE 284
            M V++ GLW+PN P+I  NR  F                          VG K  PSW  
Sbjct: 1    MGVEVLGLWLPN-PAIRFNRPPFLHLSPPTRASLVTPASLSSPPPTIQIVGGKSTPSWQG 59

Query: 285  NGYANPNSNNTFDGCQGETDLWAELDTDLYHWTKALRPVQWFPGHIAKAXXXXXXXXXXM 464
            +G      N+   G   ETD W + +TDLYHWTK LRPVQW+PGHIAK           M
Sbjct: 60   SG------NDVCGGGGEETD-WYDFETDLYHWTKPLRPVQWYPGHIAKTEKELKEQLKLM 112

Query: 465  DVVIEVRDGRIPMSTSHPQMDLWLGNRKRILVLNREDMISTADRNAWAAYFTRHGTKAVF 644
            DVVIEVRD RIP+ST+HPQMD WLGNRKRILVLNREDMIS ADRNAWA YF R G K V 
Sbjct: 113  DVVIEVRDARIPLSTTHPQMDAWLGNRKRILVLNREDMISKADRNAWATYFARQGIKVVL 172

Query: 645  SNGQLGMGTMKLGRLAKELAADVNVKRRAKGLLPRPVRAGIVGYPNVGKSSLVNRLLKRR 824
            SNGQLGMGTMKL R AK LAA VNVKRR KGLLPRPVRAGIVGYPNVGKSSL+NRLLKRR
Sbjct: 173  SNGQLGMGTMKLSRFAKSLAASVNVKRREKGLLPRPVRAGIVGYPNVGKSSLINRLLKRR 232

Query: 825  MCPAAPRPGVTRELKWVRFGKDLELLDSPGILPMRISDQSAAIKLAICDDIGERSYDVAD 1004
            MCPAAPRPGVTREL+WVRFG DLELLDSPGI+PMRISDQSAAIKLAICDDIGERSYDV D
Sbjct: 233  MCPAAPRPGVTRELRWVRFGNDLELLDSPGIIPMRISDQSAAIKLAICDDIGERSYDVTD 292

Query: 1005 VAAILVQMLTKLPTVGGDALCKRYKIDVDSQCGKTFIEKLALQVFNGNVHQAAFRVLSDF 1184
            VAAILVQ+LTKLPTVG  AL  RYK+D D  CGK F++KL++ +FNG+ HQAAFR+LSDF
Sbjct: 293  VAAILVQILTKLPTVGAKALNNRYKMDADDFCGKIFVQKLSVHLFNGDTHQAAFRILSDF 352

Query: 1185 RKGRFGWTALERPP 1226
            RKG+FGW ALERPP
Sbjct: 353  RKGKFGWAALERPP 366


>ref|XP_004150129.1| PREDICTED: ribosome biogenesis GTPase A-like [Cucumis sativus]
            gi|449507918|ref|XP_004163166.1| PREDICTED: ribosome
            biogenesis GTPase A-like [Cucumis sativus]
          Length = 370

 Score =  495 bits (1275), Expect = e-137
 Identities = 251/372 (67%), Positives = 286/372 (76%), Gaps = 1/372 (0%)
 Frame = +3

Query: 117  MAMSVQLSGLWVPNSPSIVPNRGRFXXXXXXXXXXXXXXXXXXXXXVGVKGPSWSEN-GY 293
            M++ +  SG ++PN+ +I P                          + + G   S   G 
Sbjct: 1    MSLHIHPSGFFLPNTRTIYPQLFFCRSGPSPPSLAPSASVSSPHPTIQIVGGKTSNFLGD 60

Query: 294  ANPNSNNTFDGCQGETDLWAELDTDLYHWTKALRPVQWFPGHIAKAXXXXXXXXXXMDVV 473
            + P   +  +  +G+   W + + DLY+WT ALRPVQW+PGHIAK           MDVV
Sbjct: 61   STPKGASNNELLEGD---WVDFEADLYYWTNALRPVQWYPGHIAKTEKELKDQLKLMDVV 117

Query: 474  IEVRDGRIPMSTSHPQMDLWLGNRKRILVLNREDMISTADRNAWAAYFTRHGTKAVFSNG 653
            IEVRD RIPMSTSHPQMD WLGNR+RILVLNREDMIS+ADRNAWA YFTR G K VFSNG
Sbjct: 118  IEVRDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWATYFTRQGIKVVFSNG 177

Query: 654  QLGMGTMKLGRLAKELAADVNVKRRAKGLLPRPVRAGIVGYPNVGKSSLVNRLLKRRMCP 833
            Q GMGTMKLGRLAK LAADVNVKRRAKGLLPR VRAGIVGYPNVGKSSL+NRLLKRRMCP
Sbjct: 178  QHGMGTMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCP 237

Query: 834  AAPRPGVTRELKWVRFGKDLELLDSPGILPMRISDQSAAIKLAICDDIGERSYDVADVAA 1013
            AAPRPGVTRELKWVRFG DLELLDSPGI+PMRISDQ+AAIKLAICDDIGERSY+ ADVAA
Sbjct: 238  AAPRPGVTRELKWVRFGNDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAA 297

Query: 1014 ILVQMLTKLPTVGGDALCKRYKIDVDSQCGKTFIEKLALQVFNGNVHQAAFRVLSDFRKG 1193
            ILVQ+LTKLP+VG + L KRYK+D   QCG+ F++KLALQ+FNG+ HQAAFR+LSDFRKG
Sbjct: 298  ILVQILTKLPSVGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKG 357

Query: 1194 RFGWTALERPPR 1229
            +FGWTALERPPR
Sbjct: 358  KFGWTALERPPR 369


>ref|XP_002271564.2| PREDICTED: ribosome biogenesis GTPase A-like [Vitis vinifera]
            gi|296086696|emb|CBI32331.3| unnamed protein product
            [Vitis vinifera]
          Length = 367

 Score =  495 bits (1275), Expect = e-137
 Identities = 252/371 (67%), Positives = 284/371 (76%), Gaps = 3/371 (0%)
 Frame = +3

Query: 123  MSVQLSGLWVPN---SPSIVPNRGRFXXXXXXXXXXXXXXXXXXXXXVGVKGPSWSENGY 293
            M+V L G+W+PN   S +++P++                        VG K      NG 
Sbjct: 1    MAVALCGVWMPNPTLSGNVLPSQ--IKPSTTALAATPHLASSSTIQIVGGKSHGQYVNG- 57

Query: 294  ANPNSNNTFDGCQGETDLWAELDTDLYHWTKALRPVQWFPGHIAKAXXXXXXXXXXMDVV 473
               +SN TF+    E+  W  LD DLYHWTK LRP+QW+PGHIAK           MDVV
Sbjct: 58   -GVSSNRTFEDISEES-YWTNLDADLYHWTKKLRPIQWYPGHIAKTEKELKEQLKLMDVV 115

Query: 474  IEVRDGRIPMSTSHPQMDLWLGNRKRILVLNREDMISTADRNAWAAYFTRHGTKAVFSNG 653
            IEV+D RIP+STSHPQM+ WLGNRKRILVLNREDMIST DRNAWA Y+   G K VFSNG
Sbjct: 116  IEVQDARIPLSTSHPQMESWLGNRKRILVLNREDMISTEDRNAWATYYAMQGIKVVFSNG 175

Query: 654  QLGMGTMKLGRLAKELAADVNVKRRAKGLLPRPVRAGIVGYPNVGKSSLVNRLLKRRMCP 833
            QLGMG+MKL RLAK LA+ VNVKRRAKGLLPRPVRAGIVGYPNVGKSSL+NRLLKRRMCP
Sbjct: 176  QLGMGSMKLSRLAKTLASGVNVKRRAKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCP 235

Query: 834  AAPRPGVTRELKWVRFGKDLELLDSPGILPMRISDQSAAIKLAICDDIGERSYDVADVAA 1013
            AAPRPGVTR+LKWV+FGKDLELLDSPGI+PMRISDQSAAIKLAICDDIGERSYDVADVAA
Sbjct: 236  AAPRPGVTRQLKWVQFGKDLELLDSPGIIPMRISDQSAAIKLAICDDIGERSYDVADVAA 295

Query: 1014 ILVQMLTKLPTVGGDALCKRYKIDVDSQCGKTFIEKLALQVFNGNVHQAAFRVLSDFRKG 1193
            ILVQMLT++P VG  AL  RYKID D  CG  F++KLALQ+FNG+ HQAAFR+L+DFRKG
Sbjct: 296  ILVQMLTRIPAVGPKALYNRYKIDTDGLCGNIFVQKLALQLFNGDTHQAAFRILTDFRKG 355

Query: 1194 RFGWTALERPP 1226
            +FGW ALERPP
Sbjct: 356  KFGWIALERPP 366


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