BLASTX nr result

ID: Glycyrrhiza23_contig00014801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014801
         (1286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552155.1| PREDICTED: RING-H2 finger protein ATL33-like...   195   2e-47
gb|ACU23940.1| unknown [Glycine max]                                  189   1e-45
ref|XP_003604974.1| RING-H2 finger protein ATL1N [Medicago trunc...   165   2e-38
ref|XP_002527730.1| RING-H2 finger protein ATL2J, putative [Rici...   155   3e-35
ref|XP_002304737.1| predicted protein [Populus trichocarpa] gi|1...   148   3e-33

>ref|XP_003552155.1| PREDICTED: RING-H2 finger protein ATL33-like [Glycine max]
          Length = 207

 Score =  195 bits (496), Expect = 2e-47
 Identities = 106/178 (59%), Positives = 121/178 (67%)
 Frame = -3

Query: 1140 SSVFQITVLXXXXXXXPFDGGSSHVDFSPLEFLLALIAIVTIPALVYTFIFAFGCSSSSR 961
            +SVF  T L        F G  S VD SPLEFLLAL+A+VTIPAL+YTFIFAFGC S  R
Sbjct: 33   NSVFPSTFLPFPPPPP-FAGPPSSVDLSPLEFLLALLAVVTIPALIYTFIFAFGCPSRRR 91

Query: 960  RQSNPGETSRESSVASELSRHDVESVPAGEVSGVKYQKEAHAREIGGECPVCLSAFADGE 781
            R+     +  E SVASE+S H    + A   + VKY+KEAHA+EIGGECPVCLS FA+GE
Sbjct: 92   RRE---PSYGEPSVASEVSHHQEFEIAAVADTEVKYRKEAHAKEIGGECPVCLSVFANGE 148

Query: 780  EVRQLSACKHSFHASCIDLWLSNHSNCPICRXXXXXXXXAVKSSGSNRDGDPQQGHRD 607
            EVRQLSACKHSFHASCIDLWLSNHSNCPICR           ++    DGD    HR+
Sbjct: 149  EVRQLSACKHSFHASCIDLWLSNHSNCPICR------ATIAVTTTKTGDGDSHLSHRE 200


>gb|ACU23940.1| unknown [Glycine max]
          Length = 207

 Score =  189 bits (481), Expect = 1e-45
 Identities = 104/178 (58%), Positives = 119/178 (66%)
 Frame = -3

Query: 1140 SSVFQITVLXXXXXXXPFDGGSSHVDFSPLEFLLALIAIVTIPALVYTFIFAFGCSSSSR 961
            +SVF  T L        F G  S VD SPLEFLLAL+A+VTIPAL+YTFIFAFGC S  R
Sbjct: 33   NSVFPSTFLPFPPPPP-FAGPPSSVDLSPLEFLLALLAVVTIPALIYTFIFAFGCPSRRR 91

Query: 960  RQSNPGETSRESSVASELSRHDVESVPAGEVSGVKYQKEAHAREIGGECPVCLSAFADGE 781
            R+     +  E SVAS +S H    + A   + VKY+KEA A+EIGGECPVCLS FA+GE
Sbjct: 92   RRE---PSYGEPSVASGVSHHQEFEIAAVADTEVKYRKEARAKEIGGECPVCLSVFANGE 148

Query: 780  EVRQLSACKHSFHASCIDLWLSNHSNCPICRXXXXXXXXAVKSSGSNRDGDPQQGHRD 607
            EVRQLSACKHSFHASCIDLWLSNHSNCPICR           ++    DGD    HR+
Sbjct: 149  EVRQLSACKHSFHASCIDLWLSNHSNCPICR------ATIAVTTTKTGDGDSHLSHRE 200


>ref|XP_003604974.1| RING-H2 finger protein ATL1N [Medicago truncatula]
            gi|355506029|gb|AES87171.1| RING-H2 finger protein ATL1N
            [Medicago truncatula]
          Length = 188

 Score =  165 bits (418), Expect = 2e-38
 Identities = 89/163 (54%), Positives = 106/163 (65%), Gaps = 1/163 (0%)
 Frame = -3

Query: 1089 FDGGSSHVDFSPLEFLLALIAIVTIPALVYTFIFAFGCSSSSRRQSNPGETSRESSVASE 910
            F   S  VD SPLEFLLALIAIVTIPAL+YTFIFAFG S   RR   P + S E S AS+
Sbjct: 29   FPDSSRSVDLSPLEFLLALIAIVTIPALIYTFIFAFGFSFCRRR---PEQNSGELSFASD 85

Query: 909  LSRHDVESVPAGEVSGVKYQKEAHAREIGGECPVCLSAFADGEEVRQLSACKHSFHASCI 730
                D+ +     VS  KY+K+AH +E GG+CPVCLS F DGE++R+LS CKH FHA CI
Sbjct: 86   ----DLTNGGGASVSDFKYRKDAHVKETGGDCPVCLSVFVDGEKLRELSCCKHYFHADCI 141

Query: 729  DLWLSNHSNCPICRXXXXXXXXAVKSSGSN-RDGDPQQGHRDA 604
            DLWL N S+CPICR         + ++ +  RD D  QG  DA
Sbjct: 142  DLWLGNRSSCPICRATVAGKRRNMSAAAAPVRDNDLMQGLPDA 184


>ref|XP_002527730.1| RING-H2 finger protein ATL2J, putative [Ricinus communis]
            gi|223532871|gb|EEF34643.1| RING-H2 finger protein ATL2J,
            putative [Ricinus communis]
          Length = 200

 Score =  155 bits (391), Expect = 3e-35
 Identities = 74/130 (56%), Positives = 92/130 (70%), Gaps = 3/130 (2%)
 Frame = -3

Query: 1068 VDFSPLEFLLALIAIVTIPALVYTFIFAFGCSSSSRRQSNPGETSRESSVASELSRHDVE 889
            VD SPLEF+LALIA++ IPAL+YTF F+  C     R      T  +   AS  S  D  
Sbjct: 24   VDLSPLEFILALIAVIAIPALIYTFFFSIKCPPGPFRSRRRHRTDSDEFFAS--SNDDNN 81

Query: 888  SVPAGE---VSGVKYQKEAHAREIGGECPVCLSAFADGEEVRQLSACKHSFHASCIDLWL 718
            S P+     VS VKYQK+ H ++IG ECPVCLS +A+GEEV+QLS+CKHSFHASCID+WL
Sbjct: 82   SSPSENKDGVSDVKYQKDTHVKDIGSECPVCLSVYAEGEEVKQLSSCKHSFHASCIDMWL 141

Query: 717  SNHSNCPICR 688
            ++HSNCP+CR
Sbjct: 142  NSHSNCPVCR 151


>ref|XP_002304737.1| predicted protein [Populus trichocarpa] gi|118483943|gb|ABK93860.1|
            unknown [Populus trichocarpa] gi|222842169|gb|EEE79716.1|
            predicted protein [Populus trichocarpa]
          Length = 195

 Score =  148 bits (373), Expect = 3e-33
 Identities = 76/169 (44%), Positives = 102/169 (60%), Gaps = 14/169 (8%)
 Frame = -3

Query: 1068 VDFSPLEFLLALIAIVTIPALVYTFIFAFGCSSSS-----RRQSNPGETSRESSVASELS 904
            VD +PLEF+LA IA++ +PAL+YTF F+  C         R +S+    S   SV+  + 
Sbjct: 23   VDLAPLEFILAFIAVIAVPALIYTFFFSIKCPPGPFRRRRRHRSSSSIISETLSVSEIVD 82

Query: 903  RHDVESVPAGE----VSGVKYQKEAHAREIGGECPVCLSAFADGEEVRQLSACKHSFHAS 736
              D+    +G+    VS VK+QK+ H +++G ECPVCLS F+DGE V+QLS CKHSFHAS
Sbjct: 83   TDDLNGTTSGDQKERVSDVKFQKDTHLQDVGSECPVCLSVFSDGEAVKQLSVCKHSFHAS 142

Query: 735  CIDLWLSNHSNCPICR-----XXXXXXXXAVKSSGSNRDGDPQQGHRDA 604
            CID+WLS++SNCP+CR                S+  N   D QQG  DA
Sbjct: 143  CIDMWLSSNSNCPVCRASTAPPAKHPGKNPSSSTSRNNVDDLQQGLPDA 191


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