BLASTX nr result

ID: Glycyrrhiza23_contig00014792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014792
         (1189 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589675.1| Zinc finger protein [Medicago truncatula] gi...   301   3e-79
ref|XP_004140400.1| PREDICTED: uncharacterized protein LOC101219...   244   2e-62
ref|XP_003530314.1| PREDICTED: zinc finger protein NUTCRACKER-li...   244   2e-62
ref|XP_003556910.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...   238   2e-60
ref|XP_002521878.1| nucleic acid binding protein, putative [Rici...   232   2e-58

>ref|XP_003589675.1| Zinc finger protein [Medicago truncatula] gi|355478723|gb|AES59926.1|
            Zinc finger protein [Medicago truncatula]
          Length = 445

 Score =  301 bits (770), Expect = 3e-79
 Identities = 191/416 (45%), Positives = 216/416 (51%), Gaps = 23/416 (5%)
 Frame = +3

Query: 3    QNLQLHRRGHNLPWKLKQKGNNKDQQPPKRKVYLCPEPTCVHHEPSRALGDLTGVKKHFS 182
            QNLQLHRRGHNLPWKLKQK N +    PKRKVYLCPEPTCVHH+PSRALGDLTG+KKH+ 
Sbjct: 83   QNLQLHRRGHNLPWKLKQKSNKE----PKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYF 138

Query: 183  RKHGEXXXXXXXXXXXYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALA 362
            RKHGE           YAVQSDWKAHSKTCGT+EYRCDCGTLFSRRDSFITHRAFCDALA
Sbjct: 139  RKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYRCDCGTLFSRRDSFITHRAFCDALA 198

Query: 363  HESGARXXXXXXNHLNSAISISSQLY----NGNGNMSFAALSEI---------DQNDNN- 500
             ES  +      N + +    +SQL+    N N NMS  ALS+I          QNDNN 
Sbjct: 199  QESSRQ---PHPNLITNTSINNSQLFRNISNNNNNMSL-ALSQIPQQHISSIHGQNDNNQ 254

Query: 501  ---ILRFGNTRTGQFNHILSPPQQVTLQTPSLFNIPAEXXXXXXXXXXXXXXXIRGXXXX 671
               ILRFGN RT QFN+ILSPP Q TLQTP     P                  +G    
Sbjct: 255  TSEILRFGNARTAQFNNILSPPPQQTLQTP-----PFNFITQQNQNYHHDQSQFQGLISL 309

Query: 672  XXXXXXXXXXXXXXXXXXXXXXPEGP-LYDH----SPISPHMSATALLQKAAQMGVXXXX 836
                                   E   ++DH    +PISPHMSATALLQKA+QMG     
Sbjct: 310  SELNNNNMFSENFNNEGSNDFFSENSIMFDHNNQTNPISPHMSATALLQKASQMG----- 364

Query: 837  XXXXXXXXXXXXXLLRSFGGMTKSDHRAVLVSANNGNTNNMQELIMNSFAAGFEEACEYX 1016
                                           +++   TNN    I+ SF           
Sbjct: 365  ------------------------------ATSSTTTTNNTSSSILRSF----------- 383

Query: 1017 XXXXXHDGMDHHRGDPKVETMMSIGGGSDGFTRDFLGVGEIV-RNMSGGVSQREQQ 1181
                         G         + G  DG TRDFLGVG+IV RNM+GGV QR Q+
Sbjct: 384  -------------GHVSSSAATKVNGAGDGLTRDFLGVGQIVMRNMNGGVGQRSQR 426


>ref|XP_004140400.1| PREDICTED: uncharacterized protein LOC101219959 [Cucumis sativus]
           gi|449487889|ref|XP_004157851.1| PREDICTED:
           uncharacterized protein LOC101227194 [Cucumis sativus]
          Length = 618

 Score =  244 bits (624), Expect = 2e-62
 Identities = 125/211 (59%), Positives = 140/211 (66%), Gaps = 11/211 (5%)
 Frame = +3

Query: 3   QNLQLHRRGHNLPWKLKQKGNNKDQQPPKRKVYLCPEPTCVHHEPSRALGDLTGVKKHFS 182
           QNLQLHRRGHNLPWKLKQK   +    PKRKVYLCPEPTCVHH+PSRALGDLTG+KKH+S
Sbjct: 91  QNLQLHRRGHNLPWKLKQKSTKE----PKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYS 146

Query: 183 RKHGEXXXXXXXXXXXYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALA 362
           RKHGE           YAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALA
Sbjct: 147 RKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALA 206

Query: 363 HESGARXXXXXXNHLNSAISISSQLYNGNGNM-----------SFAALSEIDQNDNNILR 509
            ES            N   +I S LY GN N+           S    S I Q+ +++LR
Sbjct: 207 QESARHPP-------NLGTAIGSHLYGGNSNVGLTLSQVPQMSSLQDHSNITQSPHDVLR 259

Query: 510 FGNTRTGQFNHILSPPQQVTLQTPSLFNIPA 602
            G  RTGQF H+L P    + + P    +P+
Sbjct: 260 LGGGRTGQFTHLLPPSIGSSFRPPPQQAMPS 290



 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 59/154 (38%), Positives = 81/154 (52%), Gaps = 17/154 (11%)
 Frame = +3

Query: 774  PHMSATALLQKAAQMGVXXXXXXXXXXXXXXXXXLLRSFGGMTKSDHRA---VLVSANNG 944
            PHMSATALLQKAAQ+G                  LLR+FG  + S  +A    L   + G
Sbjct: 449  PHMSATALLQKAAQLG-------STTSSSNTTATLLRTFGSSSTSSGKASDRTLFPPSYG 501

Query: 945  ------NTNNMQELIMNSFAAGFEEACEYXXXXXXHDGMDHHRGDPKVE---TMMSIGGG 1097
                  N +N+Q+L MNSFA     +  +        G++      K++   + +S+GGG
Sbjct: 502  GVVFGENESNLQDL-MNSFANASSGSGMFGSF-----GVESLEDPTKLQQNLSTVSMGGG 555

Query: 1098 SDGFTRDFLGVGEIVRNMS-----GGVSQREQQQ 1184
            +D  TRDFLGVG+IVR+MS     GG +QRE +Q
Sbjct: 556  TDRLTRDFLGVGQIVRSMSGGGGGGGYTQREHKQ 589


>ref|XP_003530314.1| PREDICTED: zinc finger protein NUTCRACKER-like [Glycine max]
          Length = 533

 Score =  244 bits (624), Expect = 2e-62
 Identities = 131/213 (61%), Positives = 149/213 (69%), Gaps = 17/213 (7%)
 Frame = +3

Query: 3   QNLQLHRRGHNLPWKLKQKGNNKDQQPPKRKVYLCPEPTCVHHEPSRALGDLTGVKKHFS 182
           QNLQLHRRGHNLPWKLKQK N +    PKRKVYLCPEPTCVHH+PSRALGDLTG+KKH+S
Sbjct: 84  QNLQLHRRGHNLPWKLKQKTNKE----PKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYS 139

Query: 183 RKHGEXXXXXXXXXXXYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALA 362
           RKHGE           YAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALA
Sbjct: 140 RKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALA 199

Query: 363 HESGARXXXXXXNHLNSAISISSQLYNGNGNMSFAALSEI--------DQN--DNNILRF 512
            ES            N + +IS+QLY  + N+S   LS++        DQN   +++L F
Sbjct: 200 QESARDQPP------NLSSAISNQLYGNSNNISL-GLSQMGPQIPSIHDQNHQSSDLLHF 252

Query: 513 GNT-RTGQFNHILSP------PQQVTLQTPSLF 590
           G   RTGQF+HIL P      P + ++QTP  F
Sbjct: 253 GGAPRTGQFDHILPPNIASSSPFRPSMQTPPFF 285


>ref|XP_003556910.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein NUTCRACKER-like
           [Glycine max]
          Length = 541

 Score =  238 bits (608), Expect = 2e-60
 Identities = 130/209 (62%), Positives = 146/209 (69%), Gaps = 13/209 (6%)
 Frame = +3

Query: 3   QNLQLHRRGHNLPWKLKQKGNNKDQQPPKRKVYLCPEPTCVHHEPSRALGDLTGVKKHFS 182
           QNLQLHRRGHNLPWKLKQK N +    PKRKVYLCPEPTCVHH+PSRALGDLTG+KKH+S
Sbjct: 84  QNLQLHRRGHNLPWKLKQKTNKE----PKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYS 139

Query: 183 RKHGEXXXXXXXXXXXYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALA 362
           RKHGE           YAVQSDWKAHSKTCG REYRCDCGTLFSRRDSFITHRAFCDALA
Sbjct: 140 RKHGEKKWKCDKCSKKYAVQSDWKAHSKTCG-REYRCDCGTLFSRRDSFITHRAFCDALA 198

Query: 363 HESGARXXXXXXNHLNSAISISSQLYNGNGNMSFAALSEI----DQN--DNNILRF-GNT 521
            ES            N + +I +QLY  + NMS   LS+I    DQN   + ++RF G  
Sbjct: 199 QESAREAP-------NLSSAIGNQLYGNSNNMSL-GLSQIPSIHDQNPQPSELMRFSGAP 250

Query: 522 RTGQFNHILSP------PQQVTLQTPSLF 590
           R GQF+HIL P      P + ++QTP  F
Sbjct: 251 RAGQFDHILPPNIASSSPFRHSMQTPPFF 279


>ref|XP_002521878.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223538916|gb|EEF40514.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 589

 Score =  232 bits (591), Expect = 2e-58
 Identities = 128/215 (59%), Positives = 144/215 (66%), Gaps = 19/215 (8%)
 Frame = +3

Query: 3   QNLQLHRRGHNLPWKLKQKGNNKDQQPPKRKVYLCPEPTCVHHEPSRALGDLTGVKKHFS 182
           QNLQLHRRGHNLPWKLKQK   +     KRKVYLCPEPTCVHH+PSRALGDLTG+KKH+S
Sbjct: 85  QNLQLHRRGHNLPWKLKQKTTKE----VKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYS 140

Query: 183 RKHGEXXXXXXXXXXXYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALA 362
           RKHGE           YAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALA
Sbjct: 141 RKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALA 200

Query: 363 HESGARXXXXXXNHLNSAISISSQLYNGNGNMSF------AALSEIDQNDNNILRF-GNT 521
            ES AR      N      +I S LY G+ NMS         +S +    ++ILR  G +
Sbjct: 201 QES-ARNPPTNLN------TIGSHLYGGS-NMSLGLSQVNTQISSMQDQSSDILRLGGGS 252

Query: 522 RTGQFNHIL------------SPPQQVTLQTPSLF 590
           RTGQF+H+L            SPPQ   + +P+ F
Sbjct: 253 RTGQFDHLLPSSMGGSVSFRPSPPQ--PMPSPAFF 285



 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 63/151 (41%), Positives = 78/151 (51%), Gaps = 13/151 (8%)
 Frame = +3

Query: 774  PHMSATALLQKAAQMGVXXXXXXXXXXXXXXXXXLLRSFGGMTKSDHRAVLVSANNG--- 944
            PHMSATALLQKAAQMG                  LLRSFG  + S       +AN G   
Sbjct: 412  PHMSATALLQKAAQMG---------STSSTYSASLLRSFGSSSSSTGMKS-AAANFGEIF 461

Query: 945  ---NTNNMQELIMNSFAA-------GFEEACEYXXXXXXHDGMDHHRGDPKVETMMSIGG 1094
               + NN+ +L MNSFAA       G  +   Y       +    H+G      + +  G
Sbjct: 462  SENDQNNLHDL-MNSFAATGNSSIFGHGQENPYGTSGGNLEEAKMHQG------LNASIG 514

Query: 1095 GSDGFTRDFLGVGEIVRNMSGGVSQREQQQQ 1187
            GSD  TRDFLGVG++VR+MSGG SQRE+Q+Q
Sbjct: 515  GSDRLTRDFLGVGQVVRSMSGGFSQREKQRQ 545


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