BLASTX nr result

ID: Glycyrrhiza23_contig00014764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014764
         (1929 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003620292.1| Cotton fiber expressed protein [Medicago tru...   298   5e-78
ref|XP_003620296.1| Fiber expressed protein [Medicago truncatula...   293   9e-77
ref|XP_003534104.1| PREDICTED: uncharacterized protein LOC100791...   220   9e-55
ref|XP_002329689.1| predicted protein [Populus trichocarpa] gi|2...   137   1e-29
gb|AFK43845.1| unknown [Medicago truncatula]                          133   1e-28

>ref|XP_003620292.1| Cotton fiber expressed protein [Medicago truncatula]
            gi|357500045|ref|XP_003620311.1| Cotton fiber expressed
            protein [Medicago truncatula] gi|355495307|gb|AES76510.1|
            Cotton fiber expressed protein [Medicago truncatula]
            gi|355495326|gb|AES76529.1| Cotton fiber expressed
            protein [Medicago truncatula]
          Length = 316

 Score =  298 bits (762), Expect = 5e-78
 Identities = 183/365 (50%), Positives = 212/365 (58%), Gaps = 37/365 (10%)
 Frame = -2

Query: 1352 MDLFHNPSSLKSSRLETAIWVSKLVLMSMGIISILVLLKVAIIPYTFDLVLSTLPRLWIS 1173
            MDLF NPSS KSSR+ET I V+KLVL+S+GIIS L+L KVAIIPYTFDLVLSTLP+LW S
Sbjct: 1    MDLFQNPSSQKSSRMETPICVAKLVLISIGIISTLILFKVAIIPYTFDLVLSTLPQLWFS 60

Query: 1172 ARKWLTLPFLYXXXXXXXXXIAAXXXXXXXXXXXNQIXXXXXXXXXXXPKHTTMTTEVLN 993
             R W TLPFLY         I A                                     
Sbjct: 61   IRTWFTLPFLYIIVNFIIIIIVA------------------------------------- 83

Query: 992  CGGGFSFGDSENLDVATTIAVADHSLKSCTHPTKPENQTN---XXXXXXXXXXXXXXXXX 822
                 SF D ++    TT ++    L++ T+P + ENQTN                    
Sbjct: 84   ---SSSFSDPKH----TTTSI----LETTTNPIELENQTNEPHQEEKKVEEVEEQEQEEK 132

Query: 821  XEVRDFGLSCNRFMTD--------------------------------PSPEKCINDYFL 738
              V+D  L  N+F+TD                                PSPEKC NDY L
Sbjct: 133  RVVKDSELFHNKFITDPIPEKCSKDFYLPDSDDKVKDFRLFCNKFIDDPSPEKCCNDYNL 192

Query: 737  PDSGDKDDDDTLEATWRAIMEGQGKTMKPQLKKSDTWAVSARIAKAEPFRDNE--CGDED 564
            PDSGDK DDD+LEATW+AIME Q KT KP LKKS TW  +ARI KAEPFR+N   CG +D
Sbjct: 193  PDSGDKGDDDSLEATWKAIMEAQEKTKKPHLKKSGTW--TARIVKAEPFRNNGGFCGGDD 250

Query: 563  DPVAWAQRELKKSETFNDRASLRREKSMSPEELNRRAEAFIQKFNKQMKLQRLESYQRFI 384
            DPVAWAQRELKKSETFNDRASL+REKSMSPEELN+RAEAFI+KFN QMKLQR+ESY RF+
Sbjct: 251  DPVAWAQRELKKSETFNDRASLKREKSMSPEELNKRAEAFIKKFNNQMKLQRMESYHRFM 310

Query: 383  EMVNR 369
            ++  R
Sbjct: 311  KLNKR 315


>ref|XP_003620296.1| Fiber expressed protein [Medicago truncatula]
            gi|357500037|ref|XP_003620307.1| Fiber expressed protein
            [Medicago truncatula] gi|355495311|gb|AES76514.1| Fiber
            expressed protein [Medicago truncatula]
            gi|355495322|gb|AES76525.1| Fiber expressed protein
            [Medicago truncatula]
          Length = 331

 Score =  293 bits (751), Expect = 9e-77
 Identities = 182/371 (49%), Positives = 217/371 (58%), Gaps = 42/371 (11%)
 Frame = -2

Query: 1352 MDLFHNPSSLKSSRLETAIWVSKLVLMSMGIISILVLLKVAIIPYTFDLVLSTLPRLWIS 1173
            MDLF NPSSLKS+R++ ++ V+KLVLMS+GIIS L+L KVAIIPYTFDLVLSTLP+LW S
Sbjct: 1    MDLFRNPSSLKSNRMDQSLGVAKLVLMSIGIISTLILFKVAIIPYTFDLVLSTLPQLWFS 60

Query: 1172 ARKWLTLPFLYXXXXXXXXXIAAXXXXXXXXXXXNQIXXXXXXXXXXXPKHTTMTTEVLN 993
             R W T+PFLY                         I             ++++T     
Sbjct: 61   IRTWFTIPFLYIIVNFI-------------------IITIVFSSNFSHKSNSSIT----- 96

Query: 992  CGGGFSFGDSENLDVATTIAVADHSLKSCTHPTKPENQTN-----XXXXXXXXXXXXXXX 828
                  F D   L   TTI      L++ T+P + ENQTN                    
Sbjct: 97   ------FSD---LKQTTTI------LETTTNPIEQENQTNEPHQEEKVVEEIEEQEQDEK 141

Query: 827  XXXEVRDFGLSCNRFMTDPSPEKC---------------------------------IND 747
               +V+D  L C+ F+T PS +KC                                  ND
Sbjct: 142  RVVDVKDSELFCDEFITHPSQKKCSKEDYSLTDSDDKVKDFELFFNKFITDPIQEKRCND 201

Query: 746  YFLPDSGDKDDDDTLEATWRAIMEGQGKTMKPQLKKSDTWAVSARIAKAEPFRDN-ECG- 573
            Y  PDSGDK DDD+LEATW+AIMEGQ KT KP LKKSDTW  +ARI KAEPFR+N  CG 
Sbjct: 202  YNSPDSGDKGDDDSLEATWKAIMEGQEKTKKPYLKKSDTW--TARIVKAEPFRNNGGCGF 259

Query: 572  --DEDDPVAWAQRELKKSETFNDRASLRREKSMSPEELNRRAEAFIQKFNKQMKLQRLES 399
               +DDPVAWA+RELKKSETFNDRASL+REKSMSPEELN+RAEAFI+KFN QMKLQRLES
Sbjct: 260  GSGDDDPVAWAERELKKSETFNDRASLKREKSMSPEELNKRAEAFIKKFNNQMKLQRLES 319

Query: 398  YQRFIEMVNRG 366
            YQRF+++VN G
Sbjct: 320  YQRFLKLVNPG 330


>ref|XP_003534104.1| PREDICTED: uncharacterized protein LOC100791218 [Glycine max]
          Length = 135

 Score =  220 bits (561), Expect = 9e-55
 Identities = 114/140 (81%), Positives = 119/140 (85%)
 Frame = -2

Query: 782 MTDPSPEKCINDYFLPDSGDKDDDDTLEATWRAIMEGQGKTMKPQLKKSDTWAVSARIAK 603
           M  P  E C NDYFLPDS   D DDTLEATWRAIMEGQGKTMKPQLKKSDTW   ARIAK
Sbjct: 1   MIRPLLENCTNDYFLPDS---DGDDTLEATWRAIMEGQGKTMKPQLKKSDTWG--ARIAK 55

Query: 602 AEPFRDNECGDEDDPVAWAQRELKKSETFNDRASLRREKSMSPEELNRRAEAFIQKFNKQ 423
           AEPF  N  G +DDPVAWAQ+ELKKS+TFNDRASLRR+KSMSPEELNRRAEAFI+K N Q
Sbjct: 56  AEPFHRNGEGGDDDPVAWAQKELKKSDTFNDRASLRRDKSMSPEELNRRAEAFIKKINNQ 115

Query: 422 MKLQRLESYQRFIEMVNRGV 363
           MKLQRLESYQRF EMVNRGV
Sbjct: 116 MKLQRLESYQRFREMVNRGV 135


>ref|XP_002329689.1| predicted protein [Populus trichocarpa] gi|222870597|gb|EEF07728.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score =  137 bits (345), Expect = 1e-29
 Identities = 80/159 (50%), Positives = 95/159 (59%), Gaps = 20/159 (12%)
 Frame = -2

Query: 779 TDPSPEKCINDYFLPDSGDK--------------DDDDTLEATWRAIMEGQGKTMKPQLK 642
           TDPS + C  D  L DS  K              D  DTLE  W +IME QGKT   QL+
Sbjct: 167 TDPSKDPCPPDSCLTDSAKKQQKKMDMEPLTQEADQQDTLEDAWTSIMEKQGKTPTRQLR 226

Query: 641 KSDTWAVSARIAK-----AEPFRDNECGDEDDPVAWAQRELKKSETFNDRASLRREKSMS 477
           K  TW    ++ +             CGD+DDPV+WA+RELKKS+TFND  SLRREKSMS
Sbjct: 227 KIGTWDTPPKVLQKVNGIVTADGGGGCGDDDDPVSWARRELKKSDTFNDSVSLRREKSMS 286

Query: 476 PEELNRRAEAFIQKFNKQMKLQRLESYQRFIEM-VNRGV 363
            +ELNRR E FI+KFN +M+LQR ES QR  EM V+ GV
Sbjct: 287 QDELNRRVEEFIRKFNHEMRLQRQESEQRVREMNVHGGV 325



 Score = 88.6 bits (218), Expect = 5e-15
 Identities = 43/71 (60%), Positives = 53/71 (74%)
 Frame = -2

Query: 1352 MDLFHNPSSLKSSRLETAIWVSKLVLMSMGIISILVLLKVAIIPYTFDLVLSTLPRLWIS 1173
            M  F   SS  +SR ETAIW  KLVL+S+GIIS  +L KVAIIP TF+L+LSTLP +WIS
Sbjct: 1    MASFFEISSFNTSRFETAIWAVKLVLLSVGIISTFILFKVAIIPCTFNLILSTLPSVWIS 60

Query: 1172 ARKWLTLPFLY 1140
             R WL+ P++Y
Sbjct: 61   LRGWLSPPYIY 71


>gb|AFK43845.1| unknown [Medicago truncatula]
          Length = 195

 Score =  133 bits (335), Expect = 1e-28
 Identities = 90/217 (41%), Positives = 109/217 (50%), Gaps = 3/217 (1%)
 Frame = -2

Query: 1352 MDLFHNPSSLKSSRLETAIWVSKLVLMSMGIISILVLLKVAIIPYTFDLVLSTLPRLWIS 1173
            MDLF NPSS KSSR+ET I V+KLVL+S+GIIS L+L KVAIIPYTFDLVLSTLP+LW S
Sbjct: 1    MDLFQNPSSQKSSRMETPICVAKLVLISIGIISTLILFKVAIIPYTFDLVLSTLPQLWFS 60

Query: 1172 ARKWLTLPFLYXXXXXXXXXIAAXXXXXXXXXXXNQIXXXXXXXXXXXPKHTTMTTEVLN 993
             R W TLPFLY         I A                                     
Sbjct: 61   IRTWFTLPFLYIIVNFIIIIIVA------------------------------------- 83

Query: 992  CGGGFSFGDSENLDVATTIAVADHSLKSCTHPTKPENQTN---XXXXXXXXXXXXXXXXX 822
                 SF D ++    TT ++    L++ T+P + ENQTN                    
Sbjct: 84   ---SSSFSDPKH----TTTSI----LETTTNPIELENQTNEPHQEEKKVEEVEEQEQEEK 132

Query: 821  XEVRDFGLSCNRFMTDPSPEKCINDYFLPDSGDKDDD 711
              V+D  L  N+F+TDP PEKC  D++LPDS DK  D
Sbjct: 133  RVVKDSELFHNKFITDPIPEKCSKDFYLPDSDDKVKD 169


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