BLASTX nr result
ID: Glycyrrhiza23_contig00014746
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00014746
(1055 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003534742.1| PREDICTED: pentatricopeptide repeat-containi... 412 e-113
ref|XP_003547288.1| PREDICTED: pentatricopeptide repeat-containi... 411 e-112
ref|XP_003534743.1| PREDICTED: pentatricopeptide repeat-containi... 379 e-103
ref|XP_003547290.1| PREDICTED: pentatricopeptide repeat-containi... 356 5e-96
ref|XP_003547289.1| PREDICTED: pentatricopeptide repeat-containi... 353 5e-95
>ref|XP_003534742.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 646
Score = 412 bits (1059), Expect = e-113
Identities = 206/267 (77%), Positives = 234/267 (87%), Gaps = 1/267 (0%)
Frame = +2
Query: 257 AKSSPLSKTRIWVNPRSPRAKQHLFKKSYGA-ASSLVKLAKSLDSCDPSEQHVSEILKGL 433
AKSS LSKT IWVNP+SPRAK HL+K SY +SSL KLA+SLDSC+P++QHVSEILK L
Sbjct: 24 AKSSSLSKTSIWVNPKSPRAK-HLWKNSYHTRSSSLTKLARSLDSCNPTQQHVSEILKVL 82
Query: 434 GDSVIERDAVLILDNMVNPDTALLALRYFQQRIEHDRHVILYNVTLKLFREIRDLERAQK 613
GD+V+E DAV IL++MVNP TALLA+ YF+Q+I+H RHVILYNVTLKLFRE++D E A+K
Sbjct: 83 GDNVLEADAVFILNSMVNPYTALLAVEYFKQKIKHARHVILYNVTLKLFREVKDFEGAEK 142
Query: 614 LFDEMLQRRVKPNLITFSTMISCAALCSVPHKAVELFERMPSFECEPDDNLSSSMIYAYA 793
LFDEMLQR V PNLITFSTMI CA++CS+PHKAV+ FE MPSF CEPDDN+ SSMIY+YA
Sbjct: 143 LFDEMLQRGVNPNLITFSTMIICASVCSLPHKAVKWFEMMPSFGCEPDDNVCSSMIYSYA 202
Query: 794 RTGNADMALSLYDRAKREKWHVDKVAFSTLIKMHGKSGNYDGCLSVYNDMKVFGAKPNMT 973
RTGNADMAL LYDRAK EKWHVD V FS LIKMHG SGNYDGCL+VYND+KV GAKPN+
Sbjct: 203 RTGNADMALRLYDRAKAEKWHVDTVVFSGLIKMHGMSGNYDGCLNVYNDLKVLGAKPNLV 262
Query: 974 TYNSLLYAMGRAKRALKAKAIYEEMIN 1054
TYN+LLYAMGRAKRA AKAIYEEMIN
Sbjct: 263 TYNALLYAMGRAKRARDAKAIYEEMIN 289
Score = 56.6 bits (135), Expect = 1e-05
Identities = 34/171 (19%), Positives = 77/171 (45%), Gaps = 1/171 (0%)
Frame = +2
Query: 545 HVILYNVTLKLFREIRDLERAQKLFDEMLQRRVKPNLITFSTMISCAALCSVPHKAVELF 724
+++ YN L + A+ +++EM+ + PN T++ ++ A+ ++
Sbjct: 260 NLVTYNALLYAMGRAKRARDAKAIYEEMINNGLTPNWPTYAALLQAYCRARFNRDALNVY 319
Query: 725 ERMPSFECEPDDNLSSSMIYAYARTGNADMALSLYDRAKRE-KWHVDKVAFSTLIKMHGK 901
+ M + D L + + A G A+ +++ K D +++LI M+
Sbjct: 320 KEMKEKGKDLDILLYNMLFDMCANVGCEGEAVKIFEDMKSSGTCRPDSFTYASLINMYSS 379
Query: 902 SGNYDGCLSVYNDMKVFGAKPNMTTYNSLLYAMGRAKRALKAKAIYEEMIN 1054
G +++N+M G +PN+ SL++ G+AKR I+ ++++
Sbjct: 380 IGKISEMEAMFNEMMESGFEPNIIVLTSLVHCYGKAKRTDDVVKIFNQLMD 430
>ref|XP_003547288.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 706
Score = 411 bits (1057), Expect = e-112
Identities = 213/309 (68%), Positives = 249/309 (80%), Gaps = 1/309 (0%)
Frame = +2
Query: 131 SCRNLKAPNFPTSRNKLSPLIITHLSLQDLNSPQTAKLENPDAKSSPLSKTRIWVNPRSP 310
S R+ K PNF +S + L Q AKL++P+AKSSPLSKT IWVNP+SP
Sbjct: 55 SSRHFKLPNFSSSHQPKTLL-------------QDAKLDDPNAKSSPLSKTSIWVNPKSP 101
Query: 311 RAKQHLFKKSYGA-ASSLVKLAKSLDSCDPSEQHVSEILKGLGDSVIERDAVLILDNMVN 487
RAK HL+K SY A +SSL KLAKSLDSC+P+++HVSEILK LGDSV+E DAV IL++MVN
Sbjct: 102 RAK-HLWKNSYHARSSSLTKLAKSLDSCNPTQEHVSEILKVLGDSVLEPDAVFILNSMVN 160
Query: 488 PDTALLALRYFQQRIEHDRHVILYNVTLKLFREIRDLERAQKLFDEMLQRRVKPNLITFS 667
P TALLA+ YF+Q+++ RHVILYNVTLKLFR+++D E A+KLFDEML R V PNLITFS
Sbjct: 161 PYTALLAVEYFKQKVKSVRHVILYNVTLKLFRKVKDFEGAEKLFDEMLHRGVNPNLITFS 220
Query: 668 TMISCAALCSVPHKAVELFERMPSFECEPDDNLSSSMIYAYARTGNADMALSLYDRAKRE 847
TMISCA++CS+PHKAV+ FE MPSF CEPD+N+ SSMIYAY RTGN DMAL LYDRAK
Sbjct: 221 TMISCASVCSLPHKAVKWFEMMPSFGCEPDNNVCSSMIYAYTRTGNTDMALRLYDRAKAG 280
Query: 848 KWHVDKVAFSTLIKMHGKSGNYDGCLSVYNDMKVFGAKPNMTTYNSLLYAMGRAKRALKA 1027
KWHVD FS LIKM+G SGNY GCL+VYNDMKV GAKPN+TTYN+LLYAMGRAKRA A
Sbjct: 281 KWHVDTAVFSGLIKMYGVSGNYVGCLNVYNDMKVLGAKPNLTTYNALLYAMGRAKRARDA 340
Query: 1028 KAIYEEMIN 1054
KAIY EMI+
Sbjct: 341 KAIYGEMIS 349
>ref|XP_003534743.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 693
Score = 379 bits (972), Expect = e-103
Identities = 193/284 (67%), Positives = 229/284 (80%), Gaps = 1/284 (0%)
Frame = +2
Query: 206 SLQDLNSPQ-TAKLENPDAKSSPLSKTRIWVNPRSPRAKQHLFKKSYGAASSLVKLAKSL 382
S Q N+ Q AKL++PDAKS LSK WVNPRSPRAKQ + +SSL KLAKSL
Sbjct: 42 SFQPFNTLQDAAKLDDPDAKSPSLSKKSFWVNPRSPRAKQLQQNSPHARSSSLTKLAKSL 101
Query: 383 DSCDPSEQHVSEILKGLGDSVIERDAVLILDNMVNPDTALLALRYFQQRIEHDRHVILYN 562
DSC+P+E+HVSEIL LG++V ERDAV IL+ M NP+TALLAL+YFQQ+I +HV+LYN
Sbjct: 102 DSCNPTEEHVSEILNVLGNNVAERDAVFILNTMANPNTALLALKYFQQKISPGKHVVLYN 161
Query: 563 VTLKLFREIRDLERAQKLFDEMLQRRVKPNLITFSTMISCAALCSVPHKAVELFERMPSF 742
VTLK+ RE++D E ++KLFDEMLQR V+PNLITFST+IS A++CS+P KA+E FE+MPSF
Sbjct: 162 VTLKVLREVKDFEGSEKLFDEMLQRGVEPNLITFSTIISSASVCSLPDKAMEWFEKMPSF 221
Query: 743 ECEPDDNLSSSMIYAYARTGNADMALSLYDRAKREKWHVDKVAFSTLIKMHGKSGNYDGC 922
EPD +++S MI+AYA +GNADMAL LY RAK EKW VD AFS LIKM G N+DGC
Sbjct: 222 GVEPDASVASFMIHAYAHSGNADMALKLYGRAKAEKWRVDTAAFSALIKMCGMLENFDGC 281
Query: 923 LSVYNDMKVFGAKPNMTTYNSLLYAMGRAKRALKAKAIYEEMIN 1054
LSVYNDMKV GAKPNM TYN+LLYAMGRAKRAL AKAIYEEMI+
Sbjct: 282 LSVYNDMKVLGAKPNMVTYNALLYAMGRAKRALDAKAIYEEMIS 325
Score = 57.0 bits (136), Expect = 8e-06
Identities = 36/171 (21%), Positives = 75/171 (43%), Gaps = 1/171 (0%)
Frame = +2
Query: 545 HVILYNVTLKLFREIRDLERAQKLFDEMLQRRVKPNLITFSTMISCAALCSVPHKAVELF 724
+++ YN L + A+ +++EM+ PN T + ++ P A+ ++
Sbjct: 296 NMVTYNALLYAMGRAKRALDAKAIYEEMISNGFSPNWPTHAALLQAYCKARFPEDALGVY 355
Query: 725 ERMPSFECEPDDNLSSSMIYAYARTGNADMALSL-YDRAKREKWHVDKVAFSTLIKMHGK 901
+ M + +L + ++ A G D A + Y+ D FS++I M+ +
Sbjct: 356 KEMKGNGMDITADLYNKLLAMCADVGYTDRASEIFYEMKSSGTCQPDSWTFSSMITMYSR 415
Query: 902 SGNYDGCLSVYNDMKVFGAKPNMTTYNSLLYAMGRAKRALKAKAIYEEMIN 1054
SG + N+M G +P + SL+ G+AKR I++++++
Sbjct: 416 SGKVSEAEGMLNEMIQSGFQPTIFVMTSLICCYGKAKRTDDVVKIFKQLLD 466
>ref|XP_003547290.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 692
Score = 356 bits (914), Expect = 5e-96
Identities = 199/341 (58%), Positives = 242/341 (70%), Gaps = 4/341 (1%)
Frame = +2
Query: 38 MAQAPYPVXXXXXXX---FHDRKHITTLLSFSHSSCRNLKAPNFPTSRNKLSPLIITHLS 208
MAQ PYP+ FH R T++ SHS L AP F S
Sbjct: 1 MAQ-PYPLCPSPSASSFSFHSRIPFFTIVP-SHSKTL-LHAPRF---------------S 42
Query: 209 LQDLNSPQTAKLENPDAKSSPLSKTRIWVNPRSPRAKQHLFKKS-YGAASSLVKLAKSLD 385
LQ +N+ Q AKL++PDAKS LSK IWVNPRSPRAK HL K S + +SSL KLAKSLD
Sbjct: 43 LQPVNTLQDAKLDDPDAKSPSLSKNSIWVNPRSPRAK-HLQKNSPHARSSSLTKLAKSLD 101
Query: 386 SCDPSEQHVSEILKGLGDSVIERDAVLILDNMVNPDTALLALRYFQQRIEHDRHVILYNV 565
SC+P+EQHVSEIL L D+V ERDAV IL+ MVNP+TALLAL+YFQ +I +HV+LYNV
Sbjct: 102 SCNPTEQHVSEILNVLRDNVSERDAVFILNTMVNPNTALLALKYFQPKINPAKHVVLYNV 161
Query: 566 TLKLFREIRDLERAQKLFDEMLQRRVKPNLITFSTMISCAALCSVPHKAVELFERMPSFE 745
TLK+ RE RD E A+KLFDEMLQR VKP+ ITFST+++CA++ +P+KAVELFE+M F
Sbjct: 162 TLKVLRESRDFEGAEKLFDEMLQRGVKPDNITFSTLVNCASVSGLPNKAVELFEKMSGFG 221
Query: 746 CEPDDNLSSSMIYAYARTGNADMALSLYDRAKREKWHVDKVAFSTLIKMHGKSGNYDGCL 925
CEPD S M+YAYART N D A++LYDRAK E W +D V FSTLIKM+ +GNYD CL
Sbjct: 222 CEPDGITCSGMVYAYARTNNVDKAVNLYDRAKAENWSLDAVTFSTLIKMYSMAGNYDKCL 281
Query: 926 SVYNDMKVFGAKPNMTTYNSLLYAMGRAKRALKAKAIYEEM 1048
VY +MKV G KPN+ TYN+LL AM R+K+ +AKAI++EM
Sbjct: 282 EVYQEMKVLGVKPNVATYNTLLGAMLRSKKHRQAKAIHKEM 322
Score = 60.1 bits (144), Expect = 9e-07
Identities = 36/168 (21%), Positives = 80/168 (47%), Gaps = 1/168 (0%)
Frame = +2
Query: 551 ILYNVTLKLFREIRDLERAQKLFDEMLQRRVKPNLITFSTMISCAALCSVPHKAVELFER 730
+ ++ +K++ + ++ +++ EM VKPN+ T++T++ +A + +
Sbjct: 262 VTFSTLIKMYSMAGNYDKCLEVYQEMKVLGVKPNVATYNTLLGAMLRSKKHRQAKAIHKE 321
Query: 731 MPSFECEPDDNLSSSMIYAYARTGNADMALSLYDRAKREKWHVDKVAFSTLIKMHGKSGN 910
M S PD +S++ Y R ++ AL +Y K + ++ L+ M G
Sbjct: 322 MKSNGVSPDFITYASLLEVYTRAQCSEDALGVYKEMKGNGMDMTADLYNKLLAMCADVGY 381
Query: 911 YDGCLSVYNDMKVFG-AKPNMTTYNSLLYAMGRAKRALKAKAIYEEMI 1051
D + ++ +MK G +P+ T++SL+ R+ + + + + EMI
Sbjct: 382 TDRAVEIFYEMKSSGTCQPDSWTFSSLITIYSRSGKVSEVEGMLNEMI 429
Score = 56.6 bits (135), Expect = 1e-05
Identities = 37/171 (21%), Positives = 76/171 (44%), Gaps = 1/171 (0%)
Frame = +2
Query: 545 HVILYNVTLKLFREIRDLERAQKLFDEMLQRRVKPNLITFSTMISCAALCSVPHKAVELF 724
+V YN L + +A+ + EM V P+ IT+++++ A+ ++
Sbjct: 295 NVATYNTLLGAMLRSKKHRQAKAIHKEMKSNGVSPDFITYASLLEVYTRAQCSEDALGVY 354
Query: 725 ERMPSFECEPDDNLSSSMIYAYARTGNADMALSL-YDRAKREKWHVDKVAFSTLIKMHGK 901
+ M + +L + ++ A G D A+ + Y+ D FS+LI ++ +
Sbjct: 355 KEMKGNGMDMTADLYNKLLAMCADVGYTDRAVEIFYEMKSSGTCQPDSWTFSSLITIYSR 414
Query: 902 SGNYDGCLSVYNDMKVFGAKPNMTTYNSLLYAMGRAKRALKAKAIYEEMIN 1054
SG + N+M G +P + SL+ G+AKR I++++++
Sbjct: 415 SGKVSEVEGMLNEMIQSGFQPTIFVMTSLIRCYGKAKRTDDVVKIFKQLLD 465
>ref|XP_003547289.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 707
Score = 353 bits (905), Expect = 5e-95
Identities = 194/323 (60%), Positives = 237/323 (73%), Gaps = 1/323 (0%)
Frame = +2
Query: 83 FHDRKHITTLLSFSHSSCRNLKAPNFPTSRNKLSPLIITHLSLQDLNSPQTAKLENPDAK 262
F+ RK ITT SFS+ S R+ K P FP S NK L L +Q N+PQ +PDAK
Sbjct: 31 FYCRKPITTYNSFSYFS-RHFKLPTFPLSHNKPKTL----LQVQAANTPQ-----DPDAK 80
Query: 263 SSPLSKTRIWVNPRSPRAKQHLFKKSYGA-ASSLVKLAKSLDSCDPSEQHVSEILKGLGD 439
SSPL +T IWVNP+SPRAK HL+K Y A +SSL KLAKSLDSC+P++QHVSEIL+ LGD
Sbjct: 81 SSPLPQTSIWVNPKSPRAK-HLWKNPYHARSSSLTKLAKSLDSCNPTQQHVSEILRVLGD 139
Query: 440 SVIERDAVLILDNMVNPDTALLALRYFQQRIEHDRHVILYNVTLKLFREIRDLERAQKLF 619
+V E DAV+IL++MVNP TALLA+ YF Q+I+ RHV+LYNVTLKLFR RD E A+KLF
Sbjct: 140 NVFESDAVVILNSMVNPYTALLAVNYFNQKIKPSRHVVLYNVTLKLFRASRDFEGAEKLF 199
Query: 620 DEMLQRRVKPNLITFSTMISCAALCSVPHKAVELFERMPSFECEPDDNLSSSMIYAYART 799
DEMLQR VKPN TFSTM++CA +K VELFE+M F EPD S+M+YAYA +
Sbjct: 200 DEMLQRGVKPNNFTFSTMVNCA------NKPVELFEKMSGFGYEPDGITCSAMVYAYALS 253
Query: 800 GNADMALSLYDRAKREKWHVDKVAFSTLIKMHGKSGNYDGCLSVYNDMKVFGAKPNMTTY 979
N D A+SLYDRA EKW +D AFS LIKM+ +GNYD CL +Y +MKV G KPN+ TY
Sbjct: 254 NNVDKAVSLYDRAIAEKWCLDAAAFSALIKMYSMAGNYDRCLKIYQEMKVLGVKPNVVTY 313
Query: 980 NSLLYAMGRAKRALKAKAIYEEM 1048
N+LL AM +A++ +AKAIY+EM
Sbjct: 314 NTLLGAMLKAEKHRQAKAIYKEM 336
Score = 62.0 bits (149), Expect = 2e-07
Identities = 36/166 (21%), Positives = 79/166 (47%), Gaps = 1/166 (0%)
Frame = +2
Query: 557 YNVTLKLFREIRDLERAQKLFDEMLQRRVKPNLITFSTMISCAALCSVPHKAVELFERMP 736
++ +K++ + +R K++ EM VKPN++T++T++ +A +++ M
Sbjct: 278 FSALIKMYSMAGNYDRCLKIYQEMKVLGVKPNVVTYNTLLGAMLKAEKHRQAKAIYKEMR 337
Query: 737 SFECEPDDNLSSSMIYAYARTGNADMALSLYDRAKREKWHVDKVAFSTLIKMHGKSGNYD 916
S PD + ++ Y ++ AL +Y K + ++ L+ M+ G D
Sbjct: 338 SNGVSPDFITYACLLEVYTIAHYSEDALGVYKEMKGNGMDMTADLYNKLLAMYADMGYID 397
Query: 917 GCLSVYNDMKVFG-AKPNMTTYNSLLYAMGRAKRALKAKAIYEEMI 1051
+ ++ +M G +P+ T+ SL+ R+ + +A+ + EMI
Sbjct: 398 RAVEIFYEMNSSGTCQPDSWTFASLIAIYSRSGKVSEAEGMLNEMI 443
Score = 62.0 bits (149), Expect = 2e-07
Identities = 36/170 (21%), Positives = 79/170 (46%), Gaps = 1/170 (0%)
Frame = +2
Query: 545 HVILYNVTLKLFREIRDLERAQKLFDEMLQRRVKPNLITFSTMISCAALCSVPHKAVELF 724
+V+ YN L + +A+ ++ EM V P+ IT++ ++ + A+ ++
Sbjct: 309 NVVTYNTLLGAMLKAEKHRQAKAIYKEMRSNGVSPDFITYACLLEVYTIAHYSEDALGVY 368
Query: 725 ERMPSFECEPDDNLSSSMIYAYARTGNADMALSL-YDRAKREKWHVDKVAFSTLIKMHGK 901
+ M + +L + ++ YA G D A+ + Y+ D F++LI ++ +
Sbjct: 369 KEMKGNGMDMTADLYNKLLAMYADMGYIDRAVEIFYEMNSSGTCQPDSWTFASLIAIYSR 428
Query: 902 SGNYDGCLSVYNDMKVFGAKPNMTTYNSLLYAMGRAKRALKAKAIYEEMI 1051
SG + N+M G +P + SL++ G+AKR ++++++
Sbjct: 429 SGKVSEAEGMLNEMIQSGFQPTIFVLTSLVHCYGKAKRTDDVVKVFKQLL 478