BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014739
         (1260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase A-lik...   605   e-170
ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycin...   583   e-164
gb|ABE79574.2| tRNA pseudouridine synthase [Medicago truncatula]      582   e-164
ref|XP_003592926.1| tRNA pseudouridine synthase A [Medicago trun...   573   e-161
ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus ...   498   e-138

>ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase A-like [Glycine max]
          Length = 369

 Score =  605 bits (1559), Expect = e-170
 Identities = 308/378 (81%), Positives = 329/378 (87%), Gaps = 2/378 (0%)
 Frame = -1

Query: 1215 MTQNPKHTVEFEECGGDRPSKITKIEYPNPSXXXXXXXXXXXXXXQKQGMSQSRR--IQR 1042
            MTQN KHTV+ E     RPSKI+KIEYP+ S               ++GMSQ+ R  IQR
Sbjct: 1    MTQNLKHTVDLECSDNSRPSKISKIEYPSDSDIDEE----------EEGMSQNPRNGIQR 50

Query: 1041 YLVAIEYIGSRFSGSQKQLTGRTVVGVLEEAFCKFVGQPVSVTCSSRTDAGVHALSNVCH 862
            YLVAIEYIG+ FSGSQKQL  RTVVG LEEAF KFVGQPVSV+CSSRTDAGVHALSNVCH
Sbjct: 51   YLVAIEYIGTLFSGSQKQLNVRTVVGALEEAFSKFVGQPVSVSCSSRTDAGVHALSNVCH 110

Query: 861  VDIERISKRRPGEVLPPHEPTVVRRAVNHFLQKHESDLMVIDVRCVPSDFHARYKAQERT 682
            VDI+RISKRRPGEVLPPHEP VV RAVNHFLQKH+SDLMVIDVRCVPSDFHAR+KAQERT
Sbjct: 111  VDIQRISKRRPGEVLPPHEPAVVGRAVNHFLQKHDSDLMVIDVRCVPSDFHARFKAQERT 170

Query: 681  YFYRLLSGPEPLSTFEKDRAWHVPDELNLPAMQEACRILVGHHDFSSFRAAGCQAKSPIR 502
            YFYRLLSGPEPLSTFEKDRAWHVP+EL+LPAMQEACR+LVG HDFSSFRAAGCQAKSPIR
Sbjct: 171  YFYRLLSGPEPLSTFEKDRAWHVPEELSLPAMQEACRVLVGCHDFSSFRAAGCQAKSPIR 230

Query: 501  TLDELSVCEVIQSPYFPSVMDREQQNKVGDDLRCCHNNSEADIPLSSSAIIDKVMTSSED 322
            TLDELSV EVI+SPYFPS+MDREQ NKV  DLR C NN+E DIP  S+  IDKV+TSS+D
Sbjct: 231  TLDELSVNEVIESPYFPSLMDREQHNKVSGDLRSCSNNTETDIPPISNPSIDKVITSSQD 290

Query: 321  VGFGKRRGHRCLVVTARARSFLYHQVRLLVGVLKAVGTGNLTIPDVERILNAKTVTATSP 142
             GFGKRR HRCLVVTARARSFLYHQVRLLVGVLKA GTGNLTIPDVERILNAKTVTA SP
Sbjct: 291  AGFGKRRRHRCLVVTARARSFLYHQVRLLVGVLKAAGTGNLTIPDVERILNAKTVTAASP 350

Query: 141  MAPACGLYLGEVKYDLPS 88
            MAPACGLYLGEVKYDLP+
Sbjct: 351  MAPACGLYLGEVKYDLPT 368


>ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycine max]
            gi|255637177|gb|ACU18919.1| unknown [Glycine max]
          Length = 370

 Score =  583 bits (1503), Expect = e-164
 Identities = 303/381 (79%), Positives = 327/381 (85%), Gaps = 5/381 (1%)
 Frame = -1

Query: 1215 MTQNPKHTVEFEECGGD---RPSKITKIEYPNPSXXXXXXXXXXXXXXQKQGMSQSRR-- 1051
            MT+N KHTV+ E C  +   RPSKI+ IEYP  S               ++ M ++ R  
Sbjct: 1    MTENLKHTVDLE-CSDNNINRPSKISIIEYPIDSDIDE-----------EEEMIKNPRNG 48

Query: 1050 IQRYLVAIEYIGSRFSGSQKQLTGRTVVGVLEEAFCKFVGQPVSVTCSSRTDAGVHALSN 871
            IQRYLVAIEYIG+RFSGSQKQL  RTVVGVLEEAF KFVGQPVSV+CSSRT AGVHALSN
Sbjct: 49   IQRYLVAIEYIGTRFSGSQKQLNVRTVVGVLEEAFSKFVGQPVSVSCSSRTVAGVHALSN 108

Query: 870  VCHVDIERISKRRPGEVLPPHEPTVVRRAVNHFLQKHESDLMVIDVRCVPSDFHARYKAQ 691
            VCHVDI+RISKRRPGEVL PHEP VV RAVNHFLQK +SDLMVIDVRCVPSDFHAR+KAQ
Sbjct: 109  VCHVDIQRISKRRPGEVLTPHEPAVVGRAVNHFLQKQDSDLMVIDVRCVPSDFHARFKAQ 168

Query: 690  ERTYFYRLLSGPEPLSTFEKDRAWHVPDELNLPAMQEACRILVGHHDFSSFRAAGCQAKS 511
            ER YFYRLLSGPEPLSTFEKDRAWHVP+EL+LPAMQEACR+LVG HDFSSFRAAGCQAKS
Sbjct: 169  ERIYFYRLLSGPEPLSTFEKDRAWHVPEELSLPAMQEACRVLVGFHDFSSFRAAGCQAKS 228

Query: 510  PIRTLDELSVCEVIQSPYFPSVMDREQQNKVGDDLRCCHNNSEADIPLSSSAIIDKVMTS 331
            PIRTLDELSV EVI+SPYFPS+MDREQ NKV  DLR C NNSE DIP +S+  IDKVM S
Sbjct: 229  PIRTLDELSVNEVIESPYFPSLMDREQHNKVSGDLRSCPNNSETDIPPTSNPSIDKVMAS 288

Query: 330  SEDVGFGKRRGHRCLVVTARARSFLYHQVRLLVGVLKAVGTGNLTIPDVERILNAKTVTA 151
            S+DVGFGKRR HRCLVVTARAR+FLYHQVRLLVGVLKAVGTGNLTIPDVERILNA+TVTA
Sbjct: 289  SQDVGFGKRRRHRCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTIPDVERILNARTVTA 348

Query: 150  TSPMAPACGLYLGEVKYDLPS 88
             SPMAPACGLYLGEVKYDLP+
Sbjct: 349  ASPMAPACGLYLGEVKYDLPT 369


>gb|ABE79574.2| tRNA pseudouridine synthase [Medicago truncatula]
          Length = 361

 Score =  582 bits (1501), Expect = e-164
 Identities = 299/382 (78%), Positives = 320/382 (83%), Gaps = 6/382 (1%)
 Frame = -1

Query: 1215 MTQ-NPKHTVEFEECG--GDRPSKITKIEYPNPSXXXXXXXXXXXXXXQKQGMSQS---R 1054
            MTQ NPKHTVEFEEC    +RPSKI+KIE                     + M+Q    R
Sbjct: 1    MTQLNPKHTVEFEECSDNNNRPSKISKIE---------------------EEMNQHHHHR 39

Query: 1053 RIQRYLVAIEYIGSRFSGSQKQLTGRTVVGVLEEAFCKFVGQPVSVTCSSRTDAGVHALS 874
            +IQRYLVA+EYIG+RF G QKQLT RTV GVLE+AFCKFVGQPVSV CSSRTDAGVHALS
Sbjct: 40   KIQRYLVAVEYIGTRFFGFQKQLTDRTVAGVLEDAFCKFVGQPVSVVCSSRTDAGVHALS 99

Query: 873  NVCHVDIERISKRRPGEVLPPHEPTVVRRAVNHFLQKHESDLMVIDVRCVPSDFHARYKA 694
            NVCHVDIERISKR+PGEVL PHEP VVRRAVNHFLQK   DL VIDVRCVPSDFHARYKA
Sbjct: 100  NVCHVDIERISKRKPGEVLQPHEPAVVRRAVNHFLQKENGDLAVIDVRCVPSDFHARYKA 159

Query: 693  QERTYFYRLLSGPEPLSTFEKDRAWHVPDELNLPAMQEACRILVGHHDFSSFRAAGCQAK 514
            QERTYFYRLLSGPE LSTFEKDRAWH+P+ELNLPAMQEAC++LVGHHDFSSFRA+GCQAK
Sbjct: 160  QERTYFYRLLSGPETLSTFEKDRAWHIPEELNLPAMQEACKVLVGHHDFSSFRASGCQAK 219

Query: 513  SPIRTLDELSVCEVIQSPYFPSVMDREQQNKVGDDLRCCHNNSEADIPLSSSAIIDKVMT 334
            SPIR+LDELSV EV +SPYFPSVMDRE    V DDL C H+NSE  IPL SSA ID+V  
Sbjct: 220  SPIRSLDELSVVEVTRSPYFPSVMDRENPINVTDDLHCFHSNSETVIPLGSSARIDEVSA 279

Query: 333  SSEDVGFGKRRGHRCLVVTARARSFLYHQVRLLVGVLKAVGTGNLTIPDVERILNAKTVT 154
            S EDVGFGKRR HRCLVVTARAR+FLYHQVRLLVGVLK VGTGN+T+ DVERILNAKTVT
Sbjct: 280  SKEDVGFGKRRYHRCLVVTARARAFLYHQVRLLVGVLKDVGTGNITVTDVERILNAKTVT 339

Query: 153  ATSPMAPACGLYLGEVKYDLPS 88
            ATSPMAPACGLYLGEVKYDLPS
Sbjct: 340  ATSPMAPACGLYLGEVKYDLPS 361


>ref|XP_003592926.1| tRNA pseudouridine synthase A [Medicago truncatula]
            gi|355481974|gb|AES63177.1| tRNA pseudouridine synthase A
            [Medicago truncatula]
          Length = 375

 Score =  573 bits (1476), Expect = e-161
 Identities = 299/396 (75%), Positives = 320/396 (80%), Gaps = 20/396 (5%)
 Frame = -1

Query: 1215 MTQ-NPKHTVEFEECG--GDRPSKITKIEYPNPSXXXXXXXXXXXXXXQKQGMSQS---R 1054
            MTQ NPKHTVEFEEC    +RPSKI+KIE                     + M+Q    R
Sbjct: 1    MTQLNPKHTVEFEECSDNNNRPSKISKIE---------------------EEMNQHHHHR 39

Query: 1053 RIQRYLVAIEYIGSRFSGSQKQLTGRTVVGVLEEAFCKFVGQPVSVTCSSRTDAGVHALS 874
            +IQRYLVA+EYIG+RF G QKQLT RTV GVLE+AFCKFVGQPVSV CSSRTDAGVHALS
Sbjct: 40   KIQRYLVAVEYIGTRFFGFQKQLTDRTVAGVLEDAFCKFVGQPVSVVCSSRTDAGVHALS 99

Query: 873  NVCHVDIERISKRRPGEVLPPHEPTVVRRAVNHFLQKHESDLMVIDVRCVPSDFHARYKA 694
            NVCHVDIERISKR+PGEVL PHEP VVRRAVNHFLQK   DL VIDVRCVPSDFHARYKA
Sbjct: 100  NVCHVDIERISKRKPGEVLQPHEPAVVRRAVNHFLQKENGDLAVIDVRCVPSDFHARYKA 159

Query: 693  QERTYFYRLLSGPEPLSTFEKDRAWHVPDELNLPA--------------MQEACRILVGH 556
            QERTYFYRLLSGPE LSTFEKDRAWH+P+ELNLPA              MQEAC++LVGH
Sbjct: 160  QERTYFYRLLSGPETLSTFEKDRAWHIPEELNLPAMQTYHMRCESLMISMQEACKVLVGH 219

Query: 555  HDFSSFRAAGCQAKSPIRTLDELSVCEVIQSPYFPSVMDREQQNKVGDDLRCCHNNSEAD 376
            HDFSSFRA+GCQAKSPIR+LDELSV EV +SPYFPSVMDRE    V DDL C H+NSE  
Sbjct: 220  HDFSSFRASGCQAKSPIRSLDELSVVEVTRSPYFPSVMDRENPINVTDDLHCFHSNSETV 279

Query: 375  IPLSSSAIIDKVMTSSEDVGFGKRRGHRCLVVTARARSFLYHQVRLLVGVLKAVGTGNLT 196
            IPL SSA ID+V  S EDVGFGKRR HRCLVVTARAR+FLYHQVRLLVGVLK VGTGN+T
Sbjct: 280  IPLGSSARIDEVSASKEDVGFGKRRYHRCLVVTARARAFLYHQVRLLVGVLKDVGTGNIT 339

Query: 195  IPDVERILNAKTVTATSPMAPACGLYLGEVKYDLPS 88
            + DVERILNAKTVTATSPMAPACGLYLGEVKYDLPS
Sbjct: 340  VTDVERILNAKTVTATSPMAPACGLYLGEVKYDLPS 375


>ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus communis]
            gi|223534233|gb|EEF35948.1| pseudouridylate synthase,
            putative [Ricinus communis]
          Length = 372

 Score =  498 bits (1282), Expect = e-138
 Identities = 255/377 (67%), Positives = 301/377 (79%), Gaps = 2/377 (0%)
 Frame = -1

Query: 1215 MTQNPKHTVEFEECGGDRPSKITKIEYPNPSXXXXXXXXXXXXXXQKQGMSQSRRIQRYL 1036
            MT+NPKH+++ E    +RPSKI K +                     + MS + ++QRYL
Sbjct: 1    MTENPKHSLDTES--RNRPSKILKTQ-DFVDDNEEGEEELQESSFVAESMSSNPKLQRYL 57

Query: 1035 VAIEYIGSRFSGSQKQLTGRTVVGVLEEAFCKFVGQPVSVTCSSRTDAGVHALSNVCHVD 856
            +A+EYIG++F+GSQKQL GRTVVGVLEEAFCKF+GQ VSV+ SSRTDAGVHALSNVCHVD
Sbjct: 58   IAVEYIGTKFAGSQKQLNGRTVVGVLEEAFCKFIGQQVSVSLSSRTDAGVHALSNVCHVD 117

Query: 855  IERISKRRPGEVLPPHEPTVVRRAVNHFLQKHESDLMVIDVRCVPSDFHARYKAQERTYF 676
            IERISKR+PGEVLPPHEP VVRRAVNHFLQK+E D+MV DVRCVPSDFHAR+KAQERTYF
Sbjct: 118  IERISKRKPGEVLPPHEPAVVRRAVNHFLQKNEGDIMVTDVRCVPSDFHARFKAQERTYF 177

Query: 675  YRLLSGPEPLSTFEKDRAWHVPDELNLPAMQEACRILVGHHDFSSFRAAGCQAKSPIRTL 496
            YR LSGPEPLSTFEKDRAWHV ++L++ AMQEAC++LVGHHDFSSFRA+GCQAKSPIRTL
Sbjct: 178  YRFLSGPEPLSTFEKDRAWHVLEDLDIVAMQEACKVLVGHHDFSSFRASGCQAKSPIRTL 237

Query: 495  DELSVCEVIQSPYFPSVMDREQQNKVGDDLRCCHNNSEADIPLSSSAIIDKVMTS--SED 322
             E+SV EV  + YFPS+ +REQ  + G++  CC    + D+P+ S +  +   +S    D
Sbjct: 238  AEISVSEVASTLYFPSITEREQNCENGEN-SCC-KKFKTDLPMGSHSNTNVAESSFGETD 295

Query: 321  VGFGKRRGHRCLVVTARARSFLYHQVRLLVGVLKAVGTGNLTIPDVERILNAKTVTATSP 142
            +GFG RR HRC VVTARARSFLYHQVRLLVGVLK+VG G+LT  DVERIL+AK+VTA SP
Sbjct: 296  LGFGIRRRHRCFVVTARARSFLYHQVRLLVGVLKSVGIGDLTTSDVERILSAKSVTAASP 355

Query: 141  MAPACGLYLGEVKYDLP 91
            MAPA GLYLG VKYDLP
Sbjct: 356  MAPARGLYLGHVKYDLP 372