BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014731
         (663 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containi...   379   e-103
ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containi...   350   1e-94
emb|CBI36234.3| unnamed protein product [Vitis vinifera]              350   1e-94
ref|XP_002517553.1| pentatricopeptide repeat-containing protein,...   329   3e-88
ref|NP_173004.1| pentatricopeptide repeat-containing protein [Ar...   327   1e-87

>ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score =  379 bits (974), Expect = e-103
 Identities = 180/217 (82%), Positives = 202/217 (93%)
 Frame = +3

Query: 9   THLSLQLGNALLSMFVRFGNLVDAWYVFGRMVERNVFSWNVLVGGYAKAGFFDEALDLYQ 188
           +HLSLQLGNALLSMFVRFGNLVDAWYVFGRM +RN+FSWNVLVGGYAKAG FDEALDLY 
Sbjct: 137 SHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYH 196

Query: 189 RMLWVGDVNLRPDVYTFPCVLRTCGGVPDLVRGREIHGHVMRFGFESEVDVVNALITMYA 368
           RMLWVG   ++PDVYTFPCVLRTCGG+P+LVRGREIH HV+R+GFES+VDVVNALITMY 
Sbjct: 197 RMLWVG---VKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYV 253

Query: 369 KCGDVDTARLVFDKMPNRDRISWNAMISGYFENGECLEGLRLFCNMLEHPVEPDLMTMTS 548
           KCGDV+TARLVFDKMPNRDRISWNAMISGYFENG CLEGLRLF  M+++PV+PDLMTMTS
Sbjct: 254 KCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTS 313

Query: 549 VIIACELMGDERLGREVHGYVMRTVFWRDASVYNSLI 659
           VI ACEL+GD+RLGR++HGYV+RT F RD S++NSLI
Sbjct: 314 VITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLI 350



 Score =  112 bits (280), Expect = 6e-23
 Identities = 73/212 (34%), Positives = 113/212 (53%), Gaps = 3/212 (1%)
 Frame = +3

Query: 33  NALLSMFVRFGNLVDAWYVFGRMVERNVFSWNVLVGGYAKAGFFDEALDLYQRMLWVGDV 212
           NAL++M+V+ G++  A  VF +M  R+  SWN ++ GY + G   E L L+  M+     
Sbjct: 246 NALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMI---KY 302

Query: 213 NLRPDVYTFPCVLRTCGGVPDLVRGREIHGHVMRFGFESEVDVVNALITMYAKCGDVDTA 392
            + PD+ T   V+  C  + D   GR+IHG+V+R  F  +  + N+LI MY+  G ++ A
Sbjct: 303 PVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEA 362

Query: 393 RLVFDKMPNRDRISWNAMISGYFENGECL---EGLRLFCNMLEHPVEPDLMTMTSVIIAC 563
             VF +   RD +SW AMISGY EN  CL   + L  +  M    + PD +T+  V+ AC
Sbjct: 363 ETVFSRTECRDLVSWTAMISGY-EN--CLMPQKALETYKMMEAEGIMPDEITIAIVLSAC 419

Query: 564 ELMGDERLGREVHGYVMRTVFWRDASVYNSLI 659
             + +  +G  +H    +      + V NSLI
Sbjct: 420 SCLCNLDMGMNLHEVAKQKGLVSYSIVANSLI 451



 Score =  105 bits (262), Expect = 8e-21
 Identities = 64/209 (30%), Positives = 105/209 (50%)
 Frame = +3

Query: 33  NALLSMFVRFGNLVDAWYVFGRMVERNVFSWNVLVGGYAKAGFFDEALDLYQRMLWVGDV 212
           N+L+ M+   G + +A  VF R   R++ SW  ++ GY       +AL+ Y+ M   G  
Sbjct: 347 NSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEG-- 404

Query: 213 NLRPDVYTFPCVLRTCGGVPDLVRGREIHGHVMRFGFESEVDVVNALITMYAKCGDVDTA 392
            + PD  T   VL  C  + +L  G  +H    + G  S   V N+LI MYAKC  +D A
Sbjct: 405 -IMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKA 463

Query: 393 RLVFDKMPNRDRISWNAMISGYFENGECLEGLRLFCNMLEHPVEPDLMTMTSVIIACELM 572
             +F     ++ +SW ++I G   N  C E L  F  M+   ++P+ +T+  V+ AC  +
Sbjct: 464 LEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIRR-LKPNSVTLVCVLSACARI 522

Query: 573 GDERLGREVHGYVMRTVFWRDASVYNSLI 659
           G    G+E+H + +RT    D  + N+++
Sbjct: 523 GALTCGKEIHAHALRTGVSFDGFMPNAIL 551



 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 55/183 (30%), Positives = 94/183 (51%)
 Frame = +3

Query: 27  LGNALLSMFVRFGNLVDAWYVFGRMVERNVFSWNVLVGGYAKAGFFDEALDLYQRMLWVG 206
           + N+L+ M+ +   +  A  +F   +E+N+ SW  ++ G        EAL  ++ M+   
Sbjct: 446 VANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIR-- 503

Query: 207 DVNLRPDVYTFPCVLRTCGGVPDLVRGREIHGHVMRFGFESEVDVVNALITMYAKCGDVD 386
              L+P+  T  CVL  C  +  L  G+EIH H +R G   +  + NA++ MY +CG ++
Sbjct: 504 --RLKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRME 561

Query: 387 TARLVFDKMPNRDRISWNAMISGYFENGECLEGLRLFCNMLEHPVEPDLMTMTSVIIACE 566
            A   F  + + +  SWN +++GY E G+      LF  M+E  V P+ +T  S++ AC 
Sbjct: 562 YAWKQFFSV-DHEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACS 620

Query: 567 LMG 575
             G
Sbjct: 621 RSG 623



 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 44/141 (31%), Positives = 72/141 (51%)
 Frame = +3

Query: 237 FPCVLRTCGGVPDLVRGREIHGHVMRFGFESEVDVVNALITMYAKCGDVDTARLVFDKMP 416
           +  ++R C        G  ++ +V        + + NAL++M+ + G++  A  VF +M 
Sbjct: 109 YVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRME 168

Query: 417 NRDRISWNAMISGYFENGECLEGLRLFCNMLEHPVEPDLMTMTSVIIACELMGDERLGRE 596
            R+  SWN ++ GY + G   E L L+  ML   V+PD+ T   V+  C  M +   GRE
Sbjct: 169 KRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGRE 228

Query: 597 VHGYVMRTVFWRDASVYNSLI 659
           +H +V+R  F  D  V N+LI
Sbjct: 229 IHVHVIRYGFESDVDVVNALI 249


>ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  350 bits (899), Expect = 1e-94
 Identities = 169/218 (77%), Positives = 192/218 (88%)
 Frame = +3

Query: 9   THLSLQLGNALLSMFVRFGNLVDAWYVFGRMVERNVFSWNVLVGGYAKAGFFDEALDLYQ 188
           T L ++LGNALLSMFVRFG+LV+AWYVFG+M ER++FSWNVLVGGYAKAG+FDEAL+LY 
Sbjct: 125 TRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYH 184

Query: 189 RMLWVGDVNLRPDVYTFPCVLRTCGGVPDLVRGREIHGHVMRFGFESEVDVVNALITMYA 368
           RMLWVG   +RPDVYTFPCVLRTCGG+PDL RGRE+H HV+R+GFES+VDVVNALITMY 
Sbjct: 185 RMLWVG---IRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYV 241

Query: 369 KCGDVDTARLVFDKMPNRDRISWNAMISGYFENGECLEGLRLFCNMLEHPVEPDLMTMTS 548
           KCGD+ +ARLVFD+MP RDRISWNAMISGYFEN  CLEGLRLF  M E  V+PDLMTMTS
Sbjct: 242 KCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTS 301

Query: 549 VIIACELMGDERLGREVHGYVMRTVFWRDASVYNSLIQ 662
           VI ACE +GDERLGREVHGYV++T F  + SV NSLIQ
Sbjct: 302 VISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQ 339



 Score =  131 bits (329), Expect = 1e-28
 Identities = 79/209 (37%), Positives = 116/209 (55%)
 Frame = +3

Query: 33  NALLSMFVRFGNLVDAWYVFGRMVERNVFSWNVLVGGYAKAGFFDEALDLYQRMLWVGDV 212
           NAL++M+V+ G++  A  VF RM  R+  SWN ++ GY +     E L L+  M    + 
Sbjct: 234 NALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMR---EF 290

Query: 213 NLRPDVYTFPCVLRTCGGVPDLVRGREIHGHVMRFGFESEVDVVNALITMYAKCGDVDTA 392
            + PD+ T   V+  C  + D   GRE+HG+V++ GF +EV V N+LI M++  G  D A
Sbjct: 291 FVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEA 350

Query: 393 RLVFDKMPNRDRISWNAMISGYFENGECLEGLRLFCNMLEHPVEPDLMTMTSVIIACELM 572
            +VF KM  +D +SW AMISGY +NG   + +  +  M    V PD +T+ SV+ AC  +
Sbjct: 351 EMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGL 410

Query: 573 GDERLGREVHGYVMRTVFWRDASVYNSLI 659
           G    G  +H +  RT       V NSLI
Sbjct: 411 GLLDKGIMLHEFADRTGLTSYVIVANSLI 439



 Score =  117 bits (294), Expect = 1e-24
 Identities = 72/213 (33%), Positives = 114/213 (53%)
 Frame = +3

Query: 21  LQLGNALLSMFVRFGNLVDAWYVFGRMVERNVFSWNVLVGGYAKAGFFDEALDLYQRMLW 200
           + + N+L+ M    G   +A  VF +M  +++ SW  ++ GY K G  ++A++ Y  M  
Sbjct: 331 VSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEH 390

Query: 201 VGDVNLRPDVYTFPCVLRTCGGVPDLVRGREIHGHVMRFGFESEVDVVNALITMYAKCGD 380
            G V   PD  T   VL  C G+  L +G  +H    R G  S V V N+LI MY+KC  
Sbjct: 391 EGVV---PDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRC 447

Query: 381 VDTARLVFDKMPNRDRISWNAMISGYFENGECLEGLRLFCNMLEHPVEPDLMTMTSVIIA 560
           +D A  VF ++PN++ ISW ++I G   N    E L  F  M+   ++P+ +T+ SV+ A
Sbjct: 448 IDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSA 506

Query: 561 CELMGDERLGREVHGYVMRTVFWRDASVYNSLI 659
           C  +G    G+E+H + +RT    D  + N+L+
Sbjct: 507 CARIGALSCGKEIHAHALRTGLGFDGFLPNALL 539



 Score =  101 bits (251), Expect = 1e-19
 Identities = 60/183 (32%), Positives = 98/183 (53%)
 Frame = +3

Query: 27  LGNALLSMFVRFGNLVDAWYVFGRMVERNVFSWNVLVGGYAKAGFFDEALDLYQRMLWVG 206
           + N+L+ M+ +   +  A  VF R+  +NV SW  ++ G        EAL  +Q+M+   
Sbjct: 434 VANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMI--- 490

Query: 207 DVNLRPDVYTFPCVLRTCGGVPDLVRGREIHGHVMRFGFESEVDVVNALITMYAKCGDVD 386
            ++L+P+  T   VL  C  +  L  G+EIH H +R G   +  + NAL+ MY +CG ++
Sbjct: 491 -LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRME 549

Query: 387 TARLVFDKMPNRDRISWNAMISGYFENGECLEGLRLFCNMLEHPVEPDLMTMTSVIIACE 566
            A   F+    +D  SWN +++GY + G+    + LF  M+E  V PD +T TS++ AC 
Sbjct: 550 PAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACS 608

Query: 567 LMG 575
             G
Sbjct: 609 RSG 611



 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 51/142 (35%), Positives = 73/142 (51%)
 Frame = +3

Query: 234 TFPCVLRTCGGVPDLVRGREIHGHVMRFGFESEVDVVNALITMYAKCGDVDTARLVFDKM 413
           T+  +LR C        G  +H +V +      V + NAL++M+ + GD+  A  VF KM
Sbjct: 96  TYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKM 155

Query: 414 PNRDRISWNAMISGYFENGECLEGLRLFCNMLEHPVEPDLMTMTSVIIACELMGDERLGR 593
             RD  SWN ++ GY + G   E L L+  ML   + PD+ T   V+  C  + D   GR
Sbjct: 156 AERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGR 215

Query: 594 EVHGYVMRTVFWRDASVYNSLI 659
           EVH +V+R  F  D  V N+LI
Sbjct: 216 EVHLHVIRYGFESDVDVVNALI 237


>emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  350 bits (899), Expect = 1e-94
 Identities = 169/218 (77%), Positives = 192/218 (88%)
 Frame = +3

Query: 9   THLSLQLGNALLSMFVRFGNLVDAWYVFGRMVERNVFSWNVLVGGYAKAGFFDEALDLYQ 188
           T L ++LGNALLSMFVRFG+LV+AWYVFG+M ER++FSWNVLVGGYAKAG+FDEAL+LY 
Sbjct: 125 TRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYH 184

Query: 189 RMLWVGDVNLRPDVYTFPCVLRTCGGVPDLVRGREIHGHVMRFGFESEVDVVNALITMYA 368
           RMLWVG   +RPDVYTFPCVLRTCGG+PDL RGRE+H HV+R+GFES+VDVVNALITMY 
Sbjct: 185 RMLWVG---IRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYV 241

Query: 369 KCGDVDTARLVFDKMPNRDRISWNAMISGYFENGECLEGLRLFCNMLEHPVEPDLMTMTS 548
           KCGD+ +ARLVFD+MP RDRISWNAMISGYFEN  CLEGLRLF  M E  V+PDLMTMTS
Sbjct: 242 KCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTS 301

Query: 549 VIIACELMGDERLGREVHGYVMRTVFWRDASVYNSLIQ 662
           VI ACE +GDERLGREVHGYV++T F  + SV NSLIQ
Sbjct: 302 VISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQ 339



 Score =  131 bits (329), Expect = 1e-28
 Identities = 79/209 (37%), Positives = 116/209 (55%)
 Frame = +3

Query: 33  NALLSMFVRFGNLVDAWYVFGRMVERNVFSWNVLVGGYAKAGFFDEALDLYQRMLWVGDV 212
           NAL++M+V+ G++  A  VF RM  R+  SWN ++ GY +     E L L+  M    + 
Sbjct: 234 NALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMR---EF 290

Query: 213 NLRPDVYTFPCVLRTCGGVPDLVRGREIHGHVMRFGFESEVDVVNALITMYAKCGDVDTA 392
            + PD+ T   V+  C  + D   GRE+HG+V++ GF +EV V N+LI M++  G  D A
Sbjct: 291 FVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEA 350

Query: 393 RLVFDKMPNRDRISWNAMISGYFENGECLEGLRLFCNMLEHPVEPDLMTMTSVIIACELM 572
            +VF KM  +D +SW AMISGY +NG   + +  +  M    V PD +T+ SV+ AC  +
Sbjct: 351 EMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGL 410

Query: 573 GDERLGREVHGYVMRTVFWRDASVYNSLI 659
           G    G  +H +  RT       V NSLI
Sbjct: 411 GLLDKGIMLHEFADRTGLTSYVIVANSLI 439



 Score =  117 bits (294), Expect = 1e-24
 Identities = 72/213 (33%), Positives = 114/213 (53%)
 Frame = +3

Query: 21  LQLGNALLSMFVRFGNLVDAWYVFGRMVERNVFSWNVLVGGYAKAGFFDEALDLYQRMLW 200
           + + N+L+ M    G   +A  VF +M  +++ SW  ++ GY K G  ++A++ Y  M  
Sbjct: 331 VSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEH 390

Query: 201 VGDVNLRPDVYTFPCVLRTCGGVPDLVRGREIHGHVMRFGFESEVDVVNALITMYAKCGD 380
            G V   PD  T   VL  C G+  L +G  +H    R G  S V V N+LI MY+KC  
Sbjct: 391 EGVV---PDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRC 447

Query: 381 VDTARLVFDKMPNRDRISWNAMISGYFENGECLEGLRLFCNMLEHPVEPDLMTMTSVIIA 560
           +D A  VF ++PN++ ISW ++I G   N    E L  F  M+   ++P+ +T+ SV+ A
Sbjct: 448 IDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSA 506

Query: 561 CELMGDERLGREVHGYVMRTVFWRDASVYNSLI 659
           C  +G    G+E+H + +RT    D  + N+L+
Sbjct: 507 CARIGALSCGKEIHAHALRTGLGFDGFLPNALL 539



 Score =  101 bits (251), Expect = 1e-19
 Identities = 60/183 (32%), Positives = 98/183 (53%)
 Frame = +3

Query: 27  LGNALLSMFVRFGNLVDAWYVFGRMVERNVFSWNVLVGGYAKAGFFDEALDLYQRMLWVG 206
           + N+L+ M+ +   +  A  VF R+  +NV SW  ++ G        EAL  +Q+M+   
Sbjct: 434 VANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMI--- 490

Query: 207 DVNLRPDVYTFPCVLRTCGGVPDLVRGREIHGHVMRFGFESEVDVVNALITMYAKCGDVD 386
            ++L+P+  T   VL  C  +  L  G+EIH H +R G   +  + NAL+ MY +CG ++
Sbjct: 491 -LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRME 549

Query: 387 TARLVFDKMPNRDRISWNAMISGYFENGECLEGLRLFCNMLEHPVEPDLMTMTSVIIACE 566
            A   F+    +D  SWN +++GY + G+    + LF  M+E  V PD +T TS++ AC 
Sbjct: 550 PAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACS 608

Query: 567 LMG 575
             G
Sbjct: 609 RSG 611



 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 51/142 (35%), Positives = 73/142 (51%)
 Frame = +3

Query: 234 TFPCVLRTCGGVPDLVRGREIHGHVMRFGFESEVDVVNALITMYAKCGDVDTARLVFDKM 413
           T+  +LR C        G  +H +V +      V + NAL++M+ + GD+  A  VF KM
Sbjct: 96  TYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKM 155

Query: 414 PNRDRISWNAMISGYFENGECLEGLRLFCNMLEHPVEPDLMTMTSVIIACELMGDERLGR 593
             RD  SWN ++ GY + G   E L L+  ML   + PD+ T   V+  C  + D   GR
Sbjct: 156 AERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGR 215

Query: 594 EVHGYVMRTVFWRDASVYNSLI 659
           EVH +V+R  F  D  V N+LI
Sbjct: 216 EVHLHVIRYGFESDVDVVNALI 237


>ref|XP_002517553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543185|gb|EEF44717.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 653

 Score =  329 bits (844), Expect = 3e-88
 Identities = 159/216 (73%), Positives = 184/216 (85%)
 Frame = +3

Query: 15  LSLQLGNALLSMFVRFGNLVDAWYVFGRMVERNVFSWNVLVGGYAKAGFFDEALDLYQRM 194
           LS++LGNALLSM+VRF +L +AW VFGRM ERN+FSWNVLVGGYAKAGFFDEAL LY RM
Sbjct: 135 LSVRLGNALLSMYVRFSDLNNAWNVFGRMGERNLFSWNVLVGGYAKAGFFDEALCLYHRM 194

Query: 195 LWVGDVNLRPDVYTFPCVLRTCGGVPDLVRGREIHGHVMRFGFESEVDVVNALITMYAKC 374
           LWVG   ++PD+YTFPCVLR+CGG  D +RG+EIH HV+RFGFE++V  VNALITMY KC
Sbjct: 195 LWVG---IKPDIYTFPCVLRSCGGANDFIRGKEIHCHVIRFGFETDVSAVNALITMYVKC 251

Query: 375 GDVDTARLVFDKMPNRDRISWNAMISGYFENGECLEGLRLFCNMLEHPVEPDLMTMTSVI 554
           G V +AR VFDKM  RDRISWNAMISGYFENGEC+EGL LF  MLE  V+PDLMTMTSVI
Sbjct: 252 GCVGSARTVFDKMLQRDRISWNAMISGYFENGECVEGLNLFLQMLELSVDPDLMTMTSVI 311

Query: 555 IACELMGDERLGREVHGYVMRTVFWRDASVYNSLIQ 662
            ACEL+GD+RLGRE+HGYV+RT +  D SV++ LIQ
Sbjct: 312 SACELLGDDRLGREIHGYVVRTGYGNDVSVHSLLIQ 347



 Score =  126 bits (316), Expect = 4e-27
 Identities = 78/209 (37%), Positives = 116/209 (55%)
 Frame = +3

Query: 33  NALLSMFVRFGNLVDAWYVFGRMVERNVFSWNVLVGGYAKAGFFDEALDLYQRMLWVGDV 212
           NAL++M+V+ G +  A  VF +M++R+  SWN ++ GY + G   E L+L+ +ML   ++
Sbjct: 242 NALITMYVKCGCVGSARTVFDKMLQRDRISWNAMISGYFENGECVEGLNLFLQML---EL 298

Query: 213 NLRPDVYTFPCVLRTCGGVPDLVRGREIHGHVMRFGFESEVDVVNALITMYAKCGDVDTA 392
           ++ PD+ T   V+  C  + D   GREIHG+V+R G+ ++V V + LI MYA  G    A
Sbjct: 299 SVDPDLMTMTSVISACELLGDDRLGREIHGYVVRTGYGNDVSVHSLLIQMYASLGYWKEA 358

Query: 393 RLVFDKMPNRDRISWNAMISGYFENGECLEGLRLFCNMLEHPVEPDLMTMTSVIIACELM 572
             VF +   RD +SW AMISGY  N    + L  + NM    + PD +T+  V+ AC  +
Sbjct: 359 EKVFSETECRDVVSWTAMISGYEGNLMHDKALETYKNMELAGIVPDEITIACVLSACASL 418

Query: 573 GDERLGREVHGYVMRTVFWRDASVYNSLI 659
           G   LG  +H    R        V NSLI
Sbjct: 419 GQLDLGMRLHELANRMGLMSFVIVANSLI 447



 Score =  111 bits (278), Expect = 1e-22
 Identities = 67/207 (32%), Positives = 105/207 (50%)
 Frame = +3

Query: 39  LLSMFVRFGNLVDAWYVFGRMVERNVFSWNVLVGGYAKAGFFDEALDLYQRMLWVGDVNL 218
           L+ M+   G   +A  VF     R+V SW  ++ GY      D+AL+ Y+ M   G V  
Sbjct: 345 LIQMYASLGYWKEAEKVFSETECRDVVSWTAMISGYEGNLMHDKALETYKNMELAGIV-- 402

Query: 219 RPDVYTFPCVLRTCGGVPDLVRGREIHGHVMRFGFESEVDVVNALITMYAKCGDVDTARL 398
            PD  T  CVL  C  +  L  G  +H    R G  S V V N+LI MY+KC  +D A  
Sbjct: 403 -PDEITIACVLSACASLGQLDLGMRLHELANRMGLMSFVIVANSLIDMYSKCKCIDKALE 461

Query: 399 VFDKMPNRDRISWNAMISGYFENGECLEGLRLFCNMLEHPVEPDLMTMTSVIIACELMGD 578
           VF  + +++ ISW ++I G   N    E L  F  M +  ++P+ +T+ SV+ AC  +G 
Sbjct: 462 VFHCIQDKNVISWTSIILGLRINNRSFEALSFFRKM-KRNLKPNSITLISVLSACARIGA 520

Query: 579 ERLGREVHGYVMRTVFWRDASVYNSLI 659
              G+E+H + ++T    +  + N+++
Sbjct: 521 LMCGKEIHAHALKTAMVYEGFLPNAIL 547



 Score = 92.0 bits (227), Expect = 9e-17
 Identities = 55/183 (30%), Positives = 93/183 (50%)
 Frame = +3

Query: 27  LGNALLSMFVRFGNLVDAWYVFGRMVERNVFSWNVLVGGYAKAGFFDEALDLYQRMLWVG 206
           + N+L+ M+ +   +  A  VF  + ++NV SW  ++ G        EAL  +++M    
Sbjct: 442 VANSLIDMYSKCKCIDKALEVFHCIQDKNVISWTSIILGLRINNRSFEALSFFRKM---- 497

Query: 207 DVNLRPDVYTFPCVLRTCGGVPDLVRGREIHGHVMRFGFESEVDVVNALITMYAKCGDVD 386
             NL+P+  T   VL  C  +  L+ G+EIH H ++     E  + NA++ MY +CG + 
Sbjct: 498 KRNLKPNSITLISVLSACARIGALMCGKEIHAHALKTAMVYEGFLPNAILDMYVRCGKLG 557

Query: 387 TARLVFDKMPNRDRISWNAMISGYFENGECLEGLRLFCNMLEHPVEPDLMTMTSVIIACE 566
            A   F+ +   D  +WN ++ GY E G+    + LF  M+E  V PD +T  +++ AC 
Sbjct: 558 LALNQFN-LYKEDVAAWNILMRGYAEQGQGAMAVELFHKMIESKVNPDDVTYIALLCACS 616

Query: 567 LMG 575
             G
Sbjct: 617 RSG 619


>ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g15510, chloroplastic; Flags: Precursor
           gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein
           [Arabidopsis thaliana] gi|300825685|gb|ADK35876.1|
           chloroplast vanilla cream 1 [Arabidopsis thaliana]
           gi|332191210|gb|AEE29331.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 866

 Score =  327 bits (839), Expect = 1e-87
 Identities = 156/216 (72%), Positives = 181/216 (83%)
 Frame = +3

Query: 15  LSLQLGNALLSMFVRFGNLVDAWYVFGRMVERNVFSWNVLVGGYAKAGFFDEALDLYQRM 194
           L ++LGNA L+MFVRFGNLVDAWYVFG+M ERN+FSWNVLVGGYAK G+FDEA+ LY RM
Sbjct: 127 LGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRM 186

Query: 195 LWVGDVNLRPDVYTFPCVLRTCGGVPDLVRGREIHGHVMRFGFESEVDVVNALITMYAKC 374
           LWVG V  +PDVYTFPCVLRTCGG+PDL RG+E+H HV+R+G+E ++DVVNALITMY KC
Sbjct: 187 LWVGGV--KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKC 244

Query: 375 GDVDTARLVFDKMPNRDRISWNAMISGYFENGECLEGLRLFCNMLEHPVEPDLMTMTSVI 554
           GDV +ARL+FD+MP RD ISWNAMISGYFENG C EGL LF  M    V+PDLMT+TSVI
Sbjct: 245 GDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI 304

Query: 555 IACELMGDERLGREVHGYVMRTVFWRDASVYNSLIQ 662
            ACEL+GD RLGR++H YV+ T F  D SV NSL Q
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQ 340



 Score =  124 bits (311), Expect = 2e-26
 Identities = 70/215 (32%), Positives = 116/215 (53%)
 Frame = +3

Query: 15  LSLQLGNALLSMFVRFGNLVDAWYVFGRMVERNVFSWNVLVGGYAKAGFFDEALDLYQRM 194
           L + + NAL++M+V+ G++  A  +F RM  R++ SWN ++ GY + G   E L+L+  M
Sbjct: 229 LDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAM 288

Query: 195 LWVGDVNLRPDVYTFPCVLRTCGGVPDLVRGREIHGHVMRFGFESEVDVVNALITMYAKC 374
                +++ PD+ T   V+  C  + D   GR+IH +V+  GF  ++ V N+L  MY   
Sbjct: 289 R---GLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNA 345

Query: 375 GDVDTARLVFDKMPNRDRISWNAMISGYFENGECLEGLRLFCNMLEHPVEPDLMTMTSVI 554
           G    A  +F +M  +D +SW  MISGY  N    + +  +  M +  V+PD +T+ +V+
Sbjct: 346 GSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVL 405

Query: 555 IACELMGDERLGREVHGYVMRTVFWRDASVYNSLI 659
            AC  +GD   G E+H   ++        V N+LI
Sbjct: 406 SACATLGDLDTGVELHKLAIKARLISYVIVANNLI 440



 Score =  123 bits (308), Expect = 4e-26
 Identities = 67/215 (31%), Positives = 118/215 (54%)
 Frame = +3

Query: 15  LSLQLGNALLSMFVRFGNLVDAWYVFGRMVERNVFSWNVLVGGYAKAGFFDEALDLYQRM 194
           + + + N+L  M++  G+  +A  +F RM  +++ SW  ++ GY      D+A+D Y+ M
Sbjct: 330 VDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMM 389

Query: 195 LWVGDVNLRPDVYTFPCVLRTCGGVPDLVRGREIHGHVMRFGFESEVDVVNALITMYAKC 374
                 +++PD  T   VL  C  + DL  G E+H   ++    S V V N LI MY+KC
Sbjct: 390 ---DQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKC 446

Query: 375 GDVDTARLVFDKMPNRDRISWNAMISGYFENGECLEGLRLFCNMLEHPVEPDLMTMTSVI 554
             +D A  +F  +P ++ ISW ++I+G   N  C E L +F   ++  ++P+ +T+T+ +
Sbjct: 447 KCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAAL 505

Query: 555 IACELMGDERLGREVHGYVMRTVFWRDASVYNSLI 659
            AC  +G    G+E+H +V+RT    D  + N+L+
Sbjct: 506 AACARIGALMCGKEIHAHVLRTGVGLDDFLPNALL 540



 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 55/179 (30%), Positives = 93/179 (51%)
 Frame = +3

Query: 27  LGNALLSMFVRFGNLVDAWYVFGRMVERNVFSWNVLVGGYAKAGFFDEALDLYQRMLWVG 206
           + N L++M+ +   +  A  +F  +  +NV SW  ++ G        EAL   ++M    
Sbjct: 435 VANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM---- 490

Query: 207 DVNLRPDVYTFPCVLRTCGGVPDLVRGREIHGHVMRFGFESEVDVVNALITMYAKCGDVD 386
            + L+P+  T    L  C  +  L+ G+EIH HV+R G   +  + NAL+ MY +CG ++
Sbjct: 491 KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMN 550

Query: 387 TARLVFDKMPNRDRISWNAMISGYFENGECLEGLRLFCNMLEHPVEPDLMTMTSVIIAC 563
           TA   F+    +D  SWN +++GY E G+    + LF  M++  V PD +T  S++  C
Sbjct: 551 TAWSQFNSQ-KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGC 608