BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014730
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW63130.1| 31 kDa putative protein [Strawberry latent ringsp...   111   5e-23
ref|NP_620833.1| 36 kDa protein [Strawberry latent ringspot viru...    70   2e-11

>gb|AAW63130.1| 31 kDa putative protein [Strawberry latent ringspot virus satellite
           RNA]
          Length = 287

 Score =  111 bits (278), Expect = 5e-23
 Identities = 53/95 (55%), Positives = 66/95 (69%)
 Frame = +2

Query: 2   PFASPLPRGPVPARRVVHVEPFTWDNMSYGQCSRTLALYKQLTSCFGSKMFQATLYKEAV 181
           PFASP P  P    +V HV+P +W+ MS+GQCSR L LYKQL SCFG KMF ++LY  AV
Sbjct: 193 PFASPSPVRPALTPKVAHVDPVSWEGMSFGQCSRALTLYKQLCSCFGVKMFSSSLYGMAV 252

Query: 182 KKVCKLTDAVPVSIPEFMGRLGQVDFGAAPAHVYV 286
           +KV +L +  PV+IPE   RLGQVD  A   H++V
Sbjct: 253 RKVLRLREDFPVAIPENFARLGQVDRDARAVHLFV 287


>ref|NP_620833.1| 36 kDa protein [Strawberry latent ringspot virus satellite RNA]
           gi|478364|pir||JQ2018 hypothetical 36.5K protein -
           strawberry latent ringspot virus
           gi|312511|emb|CAA49480.1| 36 kDa protein [Strawberry
           latent ringspot virus satellite RNA]
          Length = 331

 Score = 70.1 bits (170), Expect(2) = 2e-11
 Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 10/73 (13%)
 Frame = +2

Query: 11  SPLPRGPVPARRV----------VHVEPFTWDNMSYGQCSRTLALYKQLTSCFGSKMFQA 160
           S LP GP+P+  +           HV+P +W+ MS+GQCSR L LY+QL  CFG KMF +
Sbjct: 185 SGLPEGPIPSLLLRQSACNCPKGCHVDPVSWEGMSFGQCSRALTLYRQLCGCFGMKMFSS 244

Query: 161 TLYKEAVKKVCKL 199
           +LY  AV++   L
Sbjct: 245 SLYGMAVRRFSAL 257



 Score = 23.1 bits (48), Expect(2) = 2e-11
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +3

Query: 276 TSTYSFCYFSSWVCAFL-GTWALFKELKVV 362
           TS YS+   S +V     GTWA FK+  ++
Sbjct: 283 TSLYSYTSSSRFVPMIRSGTWAFFKDSLII 312