BLASTX nr result

ID: Glycyrrhiza23_contig00014722 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014722
         (670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK33981.1| unknown [Lotus japonicus]                              147   2e-33
ref|XP_003545702.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   138   1e-30
gb|ACU18813.1| unknown [Glycine max]                                  138   1e-30
ref|XP_003531535.1| PREDICTED: RING-H2 finger protein ATL54-like...   124   2e-26
ref|XP_003593242.1| RING-H2 zinc finger protein-like protein [Me...   115   6e-24

>gb|AFK33981.1| unknown [Lotus japonicus]
          Length = 404

 Score =  147 bits (370), Expect = 2e-33
 Identities = 83/168 (49%), Positives = 91/168 (54%), Gaps = 5/168 (2%)
 Frame = +2

Query: 182 LNHGKLL-PEICQLICHGKESAGSCSSDTDCSLCFKICLINXXXXXXXXXXXXXXXXXS- 355
           L+H KL+  E C+ ICHGK+S  SCSSD  C +C KICL N                 S 
Sbjct: 3   LHHRKLMMQEACEFICHGKDSGSSCSSD--CRVCLKICLTNPPQFPYFFPSPPPSPPQSS 60

Query: 356 FYTDEDEHHHD---KITTYXXXXXXXXXXXXXXVCCRAIYTRFXXXXXXXXXXXXXXXXX 526
           FY D D+HHH      +TY              VCC AIYTR                  
Sbjct: 61  FYIDVDDHHHHHRVSSSTYLILTLALLGAAFFVVCCSAIYTRLCSRNRGIISQREETEEV 120

Query: 527 XXDDFLDEEHGPIVDHPIWYIRTLGLHQSVINAITVCNYKKGEGLIEG 670
             DDFLDEEHG IVDHPIWYIRT GLHQS+I AITVC YKKGEGLIEG
Sbjct: 121 H-DDFLDEEHGAIVDHPIWYIRTTGLHQSIIKAITVCRYKKGEGLIEG 167


>ref|XP_003545702.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Glycine
           max]
          Length = 385

 Score =  138 bits (347), Expect = 1e-30
 Identities = 84/170 (49%), Positives = 94/170 (55%), Gaps = 3/170 (1%)
 Frame = +2

Query: 170 MGLHLNHGKL--LPEICQLICHGKESAGSCSSDTDCSLCFKICLINXXXXXXXXXXXXXX 343
           MGLH +H KL  LPEIC  ICH K+S   CSSD  C +C KICL N              
Sbjct: 1   MGLH-HHRKLMPLPEICGSICHVKKSE-LCSSD--CKVCLKICLTNYSPPTLPPQVPPFQ 56

Query: 344 XXXSFYTDEDEHHHDKITTYXXXXXXXXXXXXXXVCCRAIYTRFXXXXXXXXXXXXXXXX 523
                  D+  +H  KI+TY              VCCRAIYTRF                
Sbjct: 57  SYDDGAADQAYNH--KISTYLFLALALLTAAFFVVCCRAIYTRFSSRRRVSSTSRRQNQT 114

Query: 524 XXXDD-FLDEEHGPIVDHPIWYIRTLGLHQSVINAITVCNYKKGEGLIEG 670
              DD F+DEE+GP+VDHPIWYIRTLGL QS+INAITVC YKKGEGLIEG
Sbjct: 115 HHDDDDFVDEENGPMVDHPIWYIRTLGLQQSIINAITVCKYKKGEGLIEG 164


>gb|ACU18813.1| unknown [Glycine max]
          Length = 385

 Score =  138 bits (347), Expect = 1e-30
 Identities = 84/170 (49%), Positives = 94/170 (55%), Gaps = 3/170 (1%)
 Frame = +2

Query: 170 MGLHLNHGKL--LPEICQLICHGKESAGSCSSDTDCSLCFKICLINXXXXXXXXXXXXXX 343
           MGLH +H KL  LPEIC  ICH K+S   CSSD  C +C KICL N              
Sbjct: 1   MGLH-HHRKLMPLPEICGSICHVKKSE-LCSSD--CKVCLKICLTNYSPPTLPPQVPPFQ 56

Query: 344 XXXSFYTDEDEHHHDKITTYXXXXXXXXXXXXXXVCCRAIYTRFXXXXXXXXXXXXXXXX 523
                  D+  +H  KI+TY              VCCRAIYTRF                
Sbjct: 57  SYDDGAADQAYNH--KISTYLFLALALLTAAFFVVCCRAIYTRFSSRRRVSSTSRRQNQT 114

Query: 524 XXXDD-FLDEEHGPIVDHPIWYIRTLGLHQSVINAITVCNYKKGEGLIEG 670
              DD F+DEE+GP+VDHPIWYIRTLGL QS+INAITVC YKKGEGLIEG
Sbjct: 115 HHDDDDFVDEENGPMVDHPIWYIRTLGLQQSIINAITVCKYKKGEGLIEG 164


>ref|XP_003531535.1| PREDICTED: RING-H2 finger protein ATL54-like [Glycine max]
          Length = 403

 Score =  124 bits (310), Expect = 2e-26
 Identities = 81/181 (44%), Positives = 95/181 (52%), Gaps = 14/181 (7%)
 Frame = +2

Query: 170 MGLHLNHG-KLLP---EICQLICHGKESAGSCSSDTDCSLCFKICLINXXXXXXXXXXXX 337
           MGLH +H  KL+P   +IC LICH K+S   CSSD  C +C KICL N            
Sbjct: 1   MGLHHHHHRKLMPLPEKICGLICHVKKSE-PCSSD--CKVCLKICLTNPQYPSFYYSPPP 57

Query: 338 XXXXXSFYTDE-----DEHHHDKITTYXXXXXXXXXXXXXXVCCRAIYTRFXXXXXXXXX 502
                    D+     D+ ++ KI+TY              V CRAIYTRF         
Sbjct: 58  PQVPPFQSYDDVVDGADQAYNHKISTYLFLALALLTAAFFVVSCRAIYTRFSSRRRVSSP 117

Query: 503 XXXXXXXXXX---DDFLDEE--HGPIVDHPIWYIRTLGLHQSVINAITVCNYKKGEGLIE 667
                        DDF+D+E  HG +VDHPIWYIRTLGL QS+INAITVC YKKGEGLIE
Sbjct: 118 STSRRQTQTHHDDDDFVDDEEHHGRMVDHPIWYIRTLGLQQSIINAITVCKYKKGEGLIE 177

Query: 668 G 670
           G
Sbjct: 178 G 178


>ref|XP_003593242.1| RING-H2 zinc finger protein-like protein [Medicago truncatula]
           gi|355482290|gb|AES63493.1| RING-H2 zinc finger
           protein-like protein [Medicago truncatula]
           gi|388498044|gb|AFK37088.1| unknown [Medicago
           truncatula]
          Length = 389

 Score =  115 bits (289), Expect = 6e-24
 Identities = 69/173 (39%), Positives = 85/173 (49%), Gaps = 6/173 (3%)
 Frame = +2

Query: 170 MGLHLNHGKLLPEICQLICHGKESAGSCSSDTDCSLCFKICLINXXXXXXXXXXXXXXXX 349
           MGL L+H KL+ ++C+ ICH      +CSS  +C+ CF  C+ +                
Sbjct: 1   MGLQLHHRKLMAKLCETICHT-----NCSSGKNCTACFNFCITSPKIPYYYPPSPPPP-- 53

Query: 350 XSFYTDEDEHHHDKITTYXXXXXXXXXXXXXXVCCRAIYTRFXXXXXXXXXXXXXXXXXX 529
                 + +HH  KI  Y              VC RAIY  F                  
Sbjct: 54  ------QQDHH--KINNYFILTLSLLAFAFFLVCIRAIYVSFRSRRRRSSLRAQPSSTTQ 105

Query: 530 XDD--FLDEE----HGPIVDHPIWYIRTLGLHQSVINAITVCNYKKGEGLIEG 670
            +D  F DEE    HG +VDHPIWYIRTLGLHQSVINAI+VC YK+GEGLIEG
Sbjct: 106 QNDRNFDDEEQQHQHGSVVDHPIWYIRTLGLHQSVINAISVCKYKRGEGLIEG 158


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