BLASTX nr result

ID: Glycyrrhiza23_contig00014667 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014667
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521814.1| PREDICTED: uncharacterized protein LOC100785...   117   2e-24
gb|AFK43416.1| unknown [Medicago truncatula]                          108   9e-22
gb|AFK49336.1| unknown [Lotus japonicus]                              108   1e-21
gb|AAN77150.1| fiber protein Fb11 [Gossypium barbadense]              107   2e-21
gb|AEC10991.1| fiber protein fb11 [Camellia sinensis]                 107   2e-21

>ref|XP_003521814.1| PREDICTED: uncharacterized protein LOC100785256 [Glycine max]
           gi|356573241|ref|XP_003554771.1| PREDICTED:
           uncharacterized protein LOC100795854 isoform 1 [Glycine
           max] gi|356573243|ref|XP_003554772.1| PREDICTED:
           uncharacterized protein LOC100795854 isoform 2 [Glycine
           max]
          Length = 63

 Score =  117 bits (293), Expect = 2e-24
 Identities = 58/63 (92%), Positives = 60/63 (95%)
 Frame = -3

Query: 544 MAVMEKLKMFVVQEPVVAASCLIAGFGLFLPAVVRPILDSYQTTKQPPQPALSDVVASMT 365
           MAVME+LKMFVVQEPVVAASCLIAGFGLFLPA VRP+LDSYQ TKQPPQPALSDVVA MT
Sbjct: 1   MAVMERLKMFVVQEPVVAASCLIAGFGLFLPAFVRPMLDSYQATKQPPQPALSDVVAGMT 60

Query: 364 GKK 356
           GKK
Sbjct: 61  GKK 63


>gb|AFK43416.1| unknown [Medicago truncatula]
          Length = 63

 Score =  108 bits (270), Expect = 9e-22
 Identities = 52/63 (82%), Positives = 58/63 (92%)
 Frame = -3

Query: 544 MAVMEKLKMFVVQEPVVAASCLIAGFGLFLPAVVRPILDSYQTTKQPPQPALSDVVASMT 365
           MAVME+L+MFV QEPVVAASCLIAGFGLFLPA VRP+LD+Y+  +QPPQPALSDVVA MT
Sbjct: 1   MAVMERLRMFVAQEPVVAASCLIAGFGLFLPAFVRPMLDTYRAAEQPPQPALSDVVAGMT 60

Query: 364 GKK 356
           GKK
Sbjct: 61  GKK 63


>gb|AFK49336.1| unknown [Lotus japonicus]
          Length = 63

 Score =  108 bits (269), Expect = 1e-21
 Identities = 54/63 (85%), Positives = 57/63 (90%)
 Frame = -3

Query: 544 MAVMEKLKMFVVQEPVVAASCLIAGFGLFLPAVVRPILDSYQTTKQPPQPALSDVVASMT 365
           MAVME LKMFVVQ+PVVAASCLIAGFGLFLPA VRP+LDSYQ TK  PQPAL+DVVA MT
Sbjct: 1   MAVMENLKMFVVQQPVVAASCLIAGFGLFLPAFVRPMLDSYQGTKPAPQPALNDVVAGMT 60

Query: 364 GKK 356
           GKK
Sbjct: 61  GKK 63


>gb|AAN77150.1| fiber protein Fb11 [Gossypium barbadense]
          Length = 65

 Score =  107 bits (267), Expect = 2e-21
 Identities = 54/65 (83%), Positives = 60/65 (92%)
 Frame = -3

Query: 544 MAVMEKLKMFVVQEPVVAASCLIAGFGLFLPAVVRPILDSYQTTKQPPQPALSDVVASMT 365
           MAVM+KLK+FVVQEPVVAASCLIAGFGLFLPAVVRPILDS +++KQ PQPAL DVVA +T
Sbjct: 1   MAVMQKLKIFVVQEPVVAASCLIAGFGLFLPAVVRPILDSLESSKQVPQPALRDVVAGVT 60

Query: 364 GKK*G 350
           GKK G
Sbjct: 61  GKKQG 65


>gb|AEC10991.1| fiber protein fb11 [Camellia sinensis]
          Length = 64

 Score =  107 bits (267), Expect = 2e-21
 Identities = 53/63 (84%), Positives = 58/63 (92%)
 Frame = -3

Query: 544 MAVMEKLKMFVVQEPVVAASCLIAGFGLFLPAVVRPILDSYQTTKQPPQPALSDVVASMT 365
           M VMEKLK+FVVQEPVV ASCLIAGFGLFLPAVVRPILDS++T+KQ P PAL+DVVA MT
Sbjct: 1   MPVMEKLKIFVVQEPVVTASCLIAGFGLFLPAVVRPILDSFETSKQVPPPALNDVVAGMT 60

Query: 364 GKK 356
           GKK
Sbjct: 61  GKK 63


Top