BLASTX nr result

ID: Glycyrrhiza23_contig00014615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014615
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537253.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-...   168   5e-40
ref|XP_003541402.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-...   164   9e-39
ref|XP_004170016.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   143   2e-32
ref|XP_004137960.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   143   2e-32
ref|XP_002525185.1| ubiquitin protein ligase E3a, putative [Rici...   129   3e-28

>ref|XP_003537253.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Glycine max]
          Length = 1557

 Score =  168 bits (425), Expect = 5e-40
 Identities = 83/104 (79%), Positives = 88/104 (84%)
 Frame = +2

Query: 161 MESRGQKRPEMVDELPADKRACSSLDFRPSSSTSSVQTHMNSTHSTMEAHDNDMDTXXXX 340
           M SRGQKRPEMVDELPADKRACSSLDFRPS+S SSVQT MNST   +EAHD+DMDT    
Sbjct: 1   MGSRGQKRPEMVDELPADKRACSSLDFRPSTSNSSVQTQMNST---VEAHDHDMDTSSSA 57

Query: 341 XXXXXXEGEPEKDSAYGSCDSDDMEQHHSSLHEYHRRRLSSDHG 472
                 EGEPEKDSAYGSCDSDDMEQHHS+LHEYHR+RLSSDHG
Sbjct: 58  SASSQSEGEPEKDSAYGSCDSDDMEQHHSTLHEYHRQRLSSDHG 101


>ref|XP_003541402.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Glycine max]
          Length = 1558

 Score =  164 bits (414), Expect = 9e-39
 Identities = 81/104 (77%), Positives = 87/104 (83%)
 Frame = +2

Query: 161 MESRGQKRPEMVDELPADKRACSSLDFRPSSSTSSVQTHMNSTHSTMEAHDNDMDTXXXX 340
           M SRGQKRPEMVDELPADKRAC+SLDFRPS+S SSVQT MNST   +EAHD+DMDT    
Sbjct: 1   MGSRGQKRPEMVDELPADKRACTSLDFRPSTSNSSVQTQMNST---VEAHDHDMDTSSSA 57

Query: 341 XXXXXXEGEPEKDSAYGSCDSDDMEQHHSSLHEYHRRRLSSDHG 472
                 EGEPEKDSAYGSCDSDDMEQHHS+L EYHR+RLSSDHG
Sbjct: 58  SASSQSEGEPEKDSAYGSCDSDDMEQHHSTLREYHRQRLSSDHG 101


>ref|XP_004170016.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           UPL4-like, partial [Cucumis sativus]
          Length = 1456

 Score =  143 bits (360), Expect = 2e-32
 Identities = 69/104 (66%), Positives = 78/104 (75%)
 Frame = +2

Query: 161 MESRGQKRPEMVDELPADKRACSSLDFRPSSSTSSVQTHMNSTHSTMEAHDNDMDTXXXX 340
           M +RGQKR EMVD LPADKRACSSL+FRPSSS+SS+Q H+ ST+S+   HDNDMDT    
Sbjct: 1   MGNRGQKRTEMVDRLPADKRACSSLEFRPSSSSSSIQMHLTSTNSSPGIHDNDMDTSSSA 60

Query: 341 XXXXXXEGEPEKDSAYGSCDSDDMEQHHSSLHEYHRRRLSSDHG 472
                 EGE +KDSAYGSCDSDD EQ HS L  YHR+R S DHG
Sbjct: 61  SASSRSEGEHDKDSAYGSCDSDDAEQKHSDLRNYHRQRSSGDHG 104


>ref|XP_004137960.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           UPL4-like [Cucumis sativus]
          Length = 1508

 Score =  143 bits (360), Expect = 2e-32
 Identities = 69/104 (66%), Positives = 78/104 (75%)
 Frame = +2

Query: 161 MESRGQKRPEMVDELPADKRACSSLDFRPSSSTSSVQTHMNSTHSTMEAHDNDMDTXXXX 340
           M +RGQKR EMVD LPADKRACSSL+FRPSSS+SS+Q H+ ST+S+   HDNDMDT    
Sbjct: 1   MGNRGQKRTEMVDRLPADKRACSSLEFRPSSSSSSIQMHLTSTNSSPGIHDNDMDTSSSA 60

Query: 341 XXXXXXEGEPEKDSAYGSCDSDDMEQHHSSLHEYHRRRLSSDHG 472
                 EGE +KDSAYGSCDSDD EQ HS L  YHR+R S DHG
Sbjct: 61  SASSRSEGEHDKDSAYGSCDSDDAEQKHSDLRNYHRQRSSGDHG 104


>ref|XP_002525185.1| ubiquitin protein ligase E3a, putative [Ricinus communis]
           gi|223535482|gb|EEF37151.1| ubiquitin protein ligase
           E3a, putative [Ricinus communis]
          Length = 1561

 Score =  129 bits (323), Expect = 3e-28
 Identities = 65/105 (61%), Positives = 75/105 (71%), Gaps = 1/105 (0%)
 Frame = +2

Query: 161 MESRGQKRPEMVDELPADKRACSSLDFRPSSSTSSVQTHMNSTHSTMEAHDNDMDTXXXX 340
           M +RGQKR E++DELPADKRACSSL+FRPSSS SS+QTH+NST+ST E H+ DMDT    
Sbjct: 1   MGNRGQKRTEVIDELPADKRACSSLEFRPSSSNSSIQTHVNSTNSTPETHEADMDTSSSG 60

Query: 341 XXXXXXEGEP-EKDSAYGSCDSDDMEQHHSSLHEYHRRRLSSDHG 472
                 E E  E+DSAYGSCDSDD    HSSL  + R R   DHG
Sbjct: 61  SASSHSEEEEHERDSAYGSCDSDDAIPRHSSLRNFQRHRSLGDHG 105