BLASTX nr result

ID: Glycyrrhiza23_contig00014614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014614
         (1342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002875270.1| hypothetical protein ARALYDRAFT_484330 [Arab...    97   1e-17
ref|NP_001189975.1| protein CHUP1 [Arabidopsis thaliana] gi|3326...    96   3e-17
ref|NP_189197.2| protein CHUP1 [Arabidopsis thaliana] gi|3341856...    96   3e-17
ref|XP_002511986.1| actin binding protein, putative [Ricinus com...    95   4e-17
ref|XP_003520050.1| PREDICTED: protein CHUP1, chloroplastic-like...    88   6e-15

>ref|XP_002875270.1| hypothetical protein ARALYDRAFT_484330 [Arabidopsis lyrata subsp.
            lyrata] gi|297321108|gb|EFH51529.1| hypothetical protein
            ARALYDRAFT_484330 [Arabidopsis lyrata subsp. lyrata]
          Length = 1002

 Score = 96.7 bits (239), Expect = 1e-17
 Identities = 82/292 (28%), Positives = 131/292 (44%), Gaps = 13/292 (4%)
 Frame = -3

Query: 1334 ELEKHNGSGGNDVVNKKIRDVQDMXXXXXXXXXXXXXXXXXXXEIGFKLDTAQAKIRT-- 1161
            ++++      +  V +K++ VQD+                   E+  KLD+A+A+I T  
Sbjct: 245  QMKEEEAMNKDTEVERKLKAVQDLEVEVMELKRKNRELQHEKRELSIKLDSAEARIATLS 304

Query: 1160 KLLQEETVAQIQEEIAGLRNVHEDLLERVEILQSNRFDMVEELVYQRWLYTCLRFEVHDH 981
             + + + VA+++EE+  L++ +EDLL++VE LQ NRF  VEELVY RW+  CLR+E+ ++
Sbjct: 305  NMTESDKVAKVREEVNNLKHNNEDLLKQVEGLQMNRFSEVEELVYLRWVNACLRYELRNY 364

Query: 980  QKQMRKKASRQYCSQNSGKEELYEKTRALLTSDPEY----DSITSNASFNXXXXXXXXXX 813
            Q    K ++R      S K +   K   L  +  E       + SN S            
Sbjct: 365  QTPAGKISARDLSKNLSPKSQAKAKRLMLEYAGSERGQGDTDLESNYSQPSSPGSDDFDN 424

Query: 812  XXXXXXXXXXXXXXXXXSLVNKIKRWKKSKDYYNNKISPKGSRNSTPSSHGLIRRFSMSM 633
                              L+ K+KRW KSKD  + + SP  SR+    S G   R S SM
Sbjct: 425  ASMDSSTSRLSSFSKKPGLIQKLKRWGKSKDDSSVQSSP--SRSFYGGSPG---RLSSSM 479

Query: 632  VESDISKPRKSGGDSDSPVMMNLPQKIKMKT-------SSNSPEKPVIVRLR 498
                     K  G  +S ++ N  + + + T       S  +PE P + R+R
Sbjct: 480  --------NKQRGPLESLMIRNAGESVAITTFGQVDQESPGTPETPNLPRIR 523


>ref|NP_001189975.1| protein CHUP1 [Arabidopsis thaliana] gi|332643532|gb|AEE77053.1|
            protein CHUP1 [Arabidopsis thaliana]
          Length = 863

 Score = 95.5 bits (236), Expect = 3e-17
 Identities = 81/292 (27%), Positives = 131/292 (44%), Gaps = 13/292 (4%)
 Frame = -3

Query: 1334 ELEKHNGSGGNDVVNKKIRDVQDMXXXXXXXXXXXXXXXXXXXEIGFKLDTAQAKIRT-- 1161
            ++++      +  V +K++ VQD+                   E+  KLD+A+A+I T  
Sbjct: 105  QMKEEEAMNKDTEVERKLKAVQDLEVQVMELKRKNRELQHEKRELSIKLDSAEARIATLS 164

Query: 1160 KLLQEETVAQIQEEIAGLRNVHEDLLERVEILQSNRFDMVEELVYQRWLYTCLRFEVHDH 981
             + + + VA+++EE+  L++ +EDLL++VE LQ NRF  VEELVY RW+  CLR+E+ ++
Sbjct: 165  NMTESDKVAKVREEVNNLKHNNEDLLKQVEGLQMNRFSEVEELVYLRWVNACLRYELRNY 224

Query: 980  QKQMRKKASRQYCSQNSGKEELYEKTRALLTSDPEY----DSITSNASFNXXXXXXXXXX 813
            Q    K ++R      S K +   K   L  +  E       + SN S            
Sbjct: 225  QTPAGKISARDLSKNLSPKSQAKAKRLMLEYAGSERGQGDTDLESNYSQPSSPGSDDFDN 284

Query: 812  XXXXXXXXXXXXXXXXXSLVNKIKRWKKSKDYYNNKISPKGSRNSTPSSHGLIRRFSMSM 633
                              L+ K+K+W KSKD  + + SP  SR+    S G   R S SM
Sbjct: 285  ASMDSSTSRFSSFSKKPGLIQKLKKWGKSKDDSSVQSSP--SRSFYGGSPG---RLSSSM 339

Query: 632  VESDISKPRKSGGDSDSPVMMNLPQKIKMKT-------SSNSPEKPVIVRLR 498
                     K  G  +S ++ N  + + + T       S  +PE P + R+R
Sbjct: 340  --------NKQRGPLESLMIRNAGESVAITTFGQVDQESPGTPETPNLPRIR 383


>ref|NP_189197.2| protein CHUP1 [Arabidopsis thaliana] gi|334185625|ref|NP_001189974.1|
            protein CHUP1 [Arabidopsis thaliana]
            gi|75273319|sp|Q9LI74.1|CHUP1_ARATH RecName: Full=Protein
            CHUP1, chloroplastic; AltName: Full=Protein CHLOROPLAST
            UNUSUAL POSITIONING 1 gi|11994760|dbj|BAB03089.1| unnamed
            protein product [Arabidopsis thaliana]
            gi|28071265|dbj|BAC55960.1| actin binding protein
            [Arabidopsis thaliana] gi|332643530|gb|AEE77051.1|
            protein CHUP1 [Arabidopsis thaliana]
            gi|332643531|gb|AEE77052.1| protein CHUP1 [Arabidopsis
            thaliana]
          Length = 1004

 Score = 95.5 bits (236), Expect = 3e-17
 Identities = 81/292 (27%), Positives = 131/292 (44%), Gaps = 13/292 (4%)
 Frame = -3

Query: 1334 ELEKHNGSGGNDVVNKKIRDVQDMXXXXXXXXXXXXXXXXXXXEIGFKLDTAQAKIRT-- 1161
            ++++      +  V +K++ VQD+                   E+  KLD+A+A+I T  
Sbjct: 246  QMKEEEAMNKDTEVERKLKAVQDLEVQVMELKRKNRELQHEKRELSIKLDSAEARIATLS 305

Query: 1160 KLLQEETVAQIQEEIAGLRNVHEDLLERVEILQSNRFDMVEELVYQRWLYTCLRFEVHDH 981
             + + + VA+++EE+  L++ +EDLL++VE LQ NRF  VEELVY RW+  CLR+E+ ++
Sbjct: 306  NMTESDKVAKVREEVNNLKHNNEDLLKQVEGLQMNRFSEVEELVYLRWVNACLRYELRNY 365

Query: 980  QKQMRKKASRQYCSQNSGKEELYEKTRALLTSDPEY----DSITSNASFNXXXXXXXXXX 813
            Q    K ++R      S K +   K   L  +  E       + SN S            
Sbjct: 366  QTPAGKISARDLSKNLSPKSQAKAKRLMLEYAGSERGQGDTDLESNYSQPSSPGSDDFDN 425

Query: 812  XXXXXXXXXXXXXXXXXSLVNKIKRWKKSKDYYNNKISPKGSRNSTPSSHGLIRRFSMSM 633
                              L+ K+K+W KSKD  + + SP  SR+    S G   R S SM
Sbjct: 426  ASMDSSTSRFSSFSKKPGLIQKLKKWGKSKDDSSVQSSP--SRSFYGGSPG---RLSSSM 480

Query: 632  VESDISKPRKSGGDSDSPVMMNLPQKIKMKT-------SSNSPEKPVIVRLR 498
                     K  G  +S ++ N  + + + T       S  +PE P + R+R
Sbjct: 481  --------NKQRGPLESLMIRNAGESVAITTFGQVDQESPGTPETPNLPRIR 524


>ref|XP_002511986.1| actin binding protein, putative [Ricinus communis]
            gi|223549166|gb|EEF50655.1| actin binding protein,
            putative [Ricinus communis]
          Length = 560

 Score = 95.1 bits (235), Expect = 4e-17
 Identities = 75/238 (31%), Positives = 121/238 (50%), Gaps = 2/238 (0%)
 Frame = -3

Query: 1202 IGFKLDTAQAKIRT--KLLQEETVAQIQEEIAGLRNVHEDLLERVEILQSNRFDMVEELV 1029
            +  KL  AQA++ +   L + + +A+I+EE +  +  +EDL ++VE LQ+NRFD+VEELV
Sbjct: 213  LAVKLAAAQARMTSLSNLTESKIIAKIEEESSAFKYANEDLSKQVERLQNNRFDVVEELV 272

Query: 1028 YQRWLYTCLRFEVHDHQKQMRKKASRQYCSQNSGKEELYEKTRALLTSDPEYDSITSNAS 849
            YQRWL  CLRFE+ ++        S  +   +S + +  EK+  LL      DSI+S  S
Sbjct: 273  YQRWLNACLRFEIQNY-----PSLSSNHNIHSSQRTQ--EKSEQLLID----DSISSRTS 321

Query: 848  FNXXXXXXXXXXXXXXXXXXXXXXXXXXXSLVNKIKRWKKSKDYYNNKISPKGSRNSTPS 669
            +                            SL++ IK+W +SKD + +      SR++  +
Sbjct: 322  WT-ESEKNDSSSTTGSSSSSQRSSISKKSSLIHNIKKWGRSKDDWRS-----SSRSNPAT 375

Query: 668  SHGLIRRFSMSMVESDISKPRKSGGDSDSPVMMNLPQKIKMKTSSNSPEKPVIVRLRR 495
             +GLIRRFS SMV    S+P+    + +   +     + K++  + S E   + R RR
Sbjct: 376  RNGLIRRFSTSMVP---SRPQIVSDERNHSGICTPFSEQKLQDLTKSVEATYVPRARR 430


>ref|XP_003520050.1| PREDICTED: protein CHUP1, chloroplastic-like [Glycine max]
          Length = 964

 Score = 87.8 bits (216), Expect = 6e-15
 Identities = 85/307 (27%), Positives = 133/307 (43%), Gaps = 8/307 (2%)
 Frame = -3

Query: 1295 VNKKIRDVQDMXXXXXXXXXXXXXXXXXXXEIGFKLDTAQAKIR--TKLLQEETVAQIQE 1122
            V KK++ V D+                   E+  KL+ A+++    + + + E VA+ +E
Sbjct: 244  VQKKLKAVNDLEVTVVELKRKNKELQHEKRELMVKLNAAESRAAELSNMTESEMVAKAKE 303

Query: 1121 EIAGLRNVHEDLLERVEILQSNRFDMVEELVYQRWLYTCLRFEVHDHQKQMRKKASRQYC 942
            E++ LR+ +EDLL++VE LQ NRF  VEELVY RW+  CLR+E+ ++Q    K ++R   
Sbjct: 304  EVSNLRHANEDLLKQVEGLQMNRFSEVEELVYLRWVNACLRYELRNNQTPQGKVSARDLS 363

Query: 941  SQNSGKEELYEKTRALLTSDPEYDS----ITSNASFNXXXXXXXXXXXXXXXXXXXXXXX 774
               S K +   K   L  +  E       + SN S                         
Sbjct: 364  KSLSPKSQEKAKQLMLEYAGSERGQGDTDLESNFSHPSSPGSEDFDNASIDSSTSKYSSL 423

Query: 773  XXXXSLVNKIKRWKKSKDYYNNKISPKGSRNSTPSSHGLIRRFSMSMVESD--ISKPRKS 600
                SL+ K K+W KSKD  +   SP  S      S G  RR S+S+ +     S   ++
Sbjct: 424  SKKTSLIQKFKKWGKSKDDSSALSSPARS-----FSGGSPRRMSVSVKQRGPLESLMLRN 478

Query: 599  GGDSDSPVMMNLPQKIKMKTSSNSPEKPVIVRLRRXXXXXXXXXXXXSYQDVTEEAEDVM 420
             GDS S     L    + +   +SPE P    +RR            S+Q +++  +  +
Sbjct: 479  AGDSVSITSFGL----RDQEPIDSPETP--TDMRRVPSSDSLNSVASSFQLMSKSVDGAL 532

Query: 419  DDKETNY 399
            D+K   Y
Sbjct: 533  DEKYPVY 539


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