BLASTX nr result

ID: Glycyrrhiza23_contig00014598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014598
         (1499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK35844.1| unknown [Medicago truncatula]                          448   e-123
gb|AFK34252.1| unknown [Medicago truncatula]                          447   e-123
ref|XP_003524433.1| PREDICTED: F-box protein SKIP8-like [Glycine...   443   e-122
ref|XP_003530424.1| PREDICTED: F-box protein SKIP8-like [Glycine...   430   e-118
ref|XP_004149013.1| PREDICTED: F-box protein SKIP8-like [Cucumis...   391   e-106

>gb|AFK35844.1| unknown [Medicago truncatula]
          Length = 284

 Score =  448 bits (1152), Expect = e-123
 Identities = 223/298 (74%), Positives = 239/298 (80%)
 Frame = -2

Query: 1294 MEIFSVLSEPFLVAVTVTALCFVLAXXXXXXXXXXXXXLHKPTKHCNCAXXXXXXXXXSA 1115
            M+IFS  S+PFL+AVTVTALCF +A                 TKHCNCA           
Sbjct: 1    MDIFSNFSQPFLLAVTVTALCFFIALFSFFRTFSLSRRFTPSTKHCNCASSDSDSD---- 56

Query: 1114 TAIPYLNGGVAVDEMLEXXXXXXXXXXXXPVVLADWRTGSSMMEELVPEITTHALSYLDY 935
              +PYLNGG +  +M E             VVLAD RTGSSMMEELVPEITTHALSYLDY
Sbjct: 57   AVVPYLNGGFS--QMTEISPPP--------VVLADRRTGSSMMEELVPEITTHALSYLDY 106

Query: 934  PSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDGITPINGWKAYYAATRAIVNINTE 755
            PSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQD + P NGWKAYYAATRAIV +NTE
Sbjct: 107  PSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDSVRPSNGWKAYYAATRAIVIVNTE 166

Query: 754  FFNVIRDKSIPAMSRFWLNADYVKCIHASGELFSGFNDVMQSWQLVFNWEQGLNFQVRDV 575
            FFN++RDKSI AMSRFWLNADYVKC+HASGELFSG+N VMQSWQLVFNW+QGLNFQVRDV
Sbjct: 167  FFNILRDKSISAMSRFWLNADYVKCVHASGELFSGYNGVMQSWQLVFNWDQGLNFQVRDV 226

Query: 574  RARVLTDMAWVTMKTYVDMDTGPFNVTNVFEFHNGRWYMVHHHSSVMNGEVDHHIVHG 401
            RARVLTDMAWVTMKTYVDMDTGPFNVTNVFEFHNGRWYMVHHHSSVMNG+V+  IVHG
Sbjct: 227  RARVLTDMAWVTMKTYVDMDTGPFNVTNVFEFHNGRWYMVHHHSSVMNGDVEQQIVHG 284


>gb|AFK34252.1| unknown [Medicago truncatula]
          Length = 284

 Score =  447 bits (1150), Expect = e-123
 Identities = 221/298 (74%), Positives = 237/298 (79%)
 Frame = -2

Query: 1294 MEIFSVLSEPFLVAVTVTALCFVLAXXXXXXXXXXXXXLHKPTKHCNCAXXXXXXXXXSA 1115
            M+IFS  S+PFL+AVTVTALCF +A                 TKHCNCA           
Sbjct: 1    MDIFSNFSQPFLLAVTVTALCFFIALFSFFRTFSLSRRFTPSTKHCNCASSDSNSD---- 56

Query: 1114 TAIPYLNGGVAVDEMLEXXXXXXXXXXXXPVVLADWRTGSSMMEELVPEITTHALSYLDY 935
              +PYLNGG +    +              VVLAD RTGSSMMEELVPEITTHALSYLDY
Sbjct: 57   AVVPYLNGGFSQTTEISPPP----------VVLADRRTGSSMMEELVPEITTHALSYLDY 106

Query: 934  PSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDGITPINGWKAYYAATRAIVNINTE 755
            PSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQD + P NGWKAYYAATRAIV +NTE
Sbjct: 107  PSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDSVRPSNGWKAYYAATRAIVIVNTE 166

Query: 754  FFNVIRDKSIPAMSRFWLNADYVKCIHASGELFSGFNDVMQSWQLVFNWEQGLNFQVRDV 575
            FFN++RDKSI AMSRFWLNADYVKC+HASGELFSG+N VMQSWQLVFNW+QGLNFQVRDV
Sbjct: 167  FFNILRDKSISAMSRFWLNADYVKCVHASGELFSGYNGVMQSWQLVFNWDQGLNFQVRDV 226

Query: 574  RARVLTDMAWVTMKTYVDMDTGPFNVTNVFEFHNGRWYMVHHHSSVMNGEVDHHIVHG 401
            RARVLTDMAWVTMKTYVDMDTGPFNVTNVFEFHNGRWYMVHHHSSVMNG+V+  IVHG
Sbjct: 227  RARVLTDMAWVTMKTYVDMDTGPFNVTNVFEFHNGRWYMVHHHSSVMNGDVEQQIVHG 284


>ref|XP_003524433.1| PREDICTED: F-box protein SKIP8-like [Glycine max]
          Length = 286

 Score =  443 bits (1140), Expect = e-122
 Identities = 223/300 (74%), Positives = 239/300 (79%), Gaps = 2/300 (0%)
 Frame = -2

Query: 1294 MEIFSVLSEPFLVAVTVTALCFVLAXXXXXXXXXXXXXLHKPTK--HCNCAXXXXXXXXX 1121
            MEIFSVLSEPFLVA+ VTALCF+ A                P +  HC+CA         
Sbjct: 1    MEIFSVLSEPFLVALAVTALCFLFALFALLRSSFSLPRRFTPPRKHHCDCASNSD----- 55

Query: 1120 SATAIPYLNGGVAVDEMLEXXXXXXXXXXXXPVVLADWRTGSSMMEELVPEITTHALSYL 941
             A A+PYLNGG    EMLE              VL + RTGSSMMEELVPEITTHALSYL
Sbjct: 56   -AGAVPYLNGGCT--EMLEPSPVPAP------AVLTERRTGSSMMEELVPEITTHALSYL 106

Query: 940  DYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDGITPINGWKAYYAATRAIVNIN 761
            DYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQD +TP NGWKAYYAATRAIVNIN
Sbjct: 107  DYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDSVTPTNGWKAYYAATRAIVNIN 166

Query: 760  TEFFNVIRDKSIPAMSRFWLNADYVKCIHASGELFSGFNDVMQSWQLVFNWEQGLNFQVR 581
            TEFFN++RDKS+ AMSRFWLNADYVKCIHASGELFSG+N VMQSWQL FNWEQGLN QV+
Sbjct: 167  TEFFNIVRDKSLQAMSRFWLNADYVKCIHASGELFSGYNAVMQSWQLAFNWEQGLNTQVQ 226

Query: 580  DVRARVLTDMAWVTMKTYVDMDTGPFNVTNVFEFHNGRWYMVHHHSSVMNGEVDHHIVHG 401
            DVRAR+LTDMAWVTMKTYVDMDTGPFNVTN++EFHNGRWYMVHHHS VMNG+VD  IVHG
Sbjct: 227  DVRARILTDMAWVTMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSCVMNGDVDLMIVHG 286


>ref|XP_003530424.1| PREDICTED: F-box protein SKIP8-like [Glycine max]
          Length = 284

 Score =  430 bits (1106), Expect = e-118
 Identities = 221/300 (73%), Positives = 235/300 (78%), Gaps = 2/300 (0%)
 Frame = -2

Query: 1294 MEIFSVLSEPFLVAVTVTALCFVLAXXXXXXXXXXXXXLHKPTK--HCNCAXXXXXXXXX 1121
            MEIFSVLSEPFLVA+ VTALCF+ A                P +  HC+C          
Sbjct: 1    MEIFSVLSEPFLVALAVTALCFLFALFSLLRSSFSLPRRFTPPRKHHCDCTSNSD----- 55

Query: 1120 SATAIPYLNGGVAVDEMLEXXXXXXXXXXXXPVVLADWRTGSSMMEELVPEITTHALSYL 941
             A A+PYLNGG    EMLE              VL + R GSSMMEELVPEITTHALSYL
Sbjct: 56   -AAAVPYLNGGRT--EMLEPSPVPAP------AVLTERRMGSSMMEELVPEITTHALSYL 106

Query: 940  DYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDGITPINGWKAYYAATRAIVNIN 761
            DYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQD ITP NGWKAYYAATRAIVNIN
Sbjct: 107  DYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDSITPTNGWKAYYAATRAIVNIN 166

Query: 760  TEFFNVIRDKSIPAMSRFWLNADYVKCIHASGELFSGFNDVMQSWQLVFNWEQGLNFQVR 581
            TEFFN++RDKS+ AMS FWLNADYVKCIHASG  FSG+N VMQ WQLVFNWEQGLNFQVR
Sbjct: 167  TEFFNIVRDKSLQAMSHFWLNADYVKCIHASG-FFSGYNAVMQGWQLVFNWEQGLNFQVR 225

Query: 580  DVRARVLTDMAWVTMKTYVDMDTGPFNVTNVFEFHNGRWYMVHHHSSVMNGEVDHHIVHG 401
            DV ARVLTDMAWVTMKTYVDMDTGPFNVTN++EFHNGRWYMVHHHSSV +G+VDH IVHG
Sbjct: 226  DVCARVLTDMAWVTMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSV-DGDVDHQIVHG 284


>ref|XP_004149013.1| PREDICTED: F-box protein SKIP8-like [Cucumis sativus]
            gi|449506211|ref|XP_004162683.1| PREDICTED: F-box protein
            SKIP8-like [Cucumis sativus]
          Length = 313

 Score =  391 bits (1004), Expect = e-106
 Identities = 197/313 (62%), Positives = 229/313 (73%), Gaps = 22/313 (7%)
 Frame = -2

Query: 1273 SEPFLVAVTVTALCFVLAXXXXXXXXXXXXXLHKPT--------KHCNCAXXXXXXXXXS 1118
            S+PF +A  VT LCF+LA                 T        ++CNC           
Sbjct: 13   SQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTKTLQSESVGTRNCNCTCSLNGGVVIR 72

Query: 1117 ------------ATAIPYLNGGVAVDEMLEXXXXXXXXXXXXPVVLADWRTGSSMMEELV 974
                        +T++PYLNG     E+LE             VV+ + +TG+SMME+LV
Sbjct: 73   GLDPRAEITSSTSTSMPYLNGRAV--EVLEKAP----------VVVTERQTGASMMEQLV 120

Query: 973  PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDGITPINGWKAY 794
            PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQD +TPINGWK+Y
Sbjct: 121  PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY 180

Query: 793  YAATRAIVNINTEFFNVIRDKSIPAMSRFWLNADYVKCIHASGELFSGFNDVMQSWQLVF 614
            YAATR I+NIN +F+N+IRD+S+ AMSRFWLNADYVKCIHASGE FSG+N V+QSWQ+ F
Sbjct: 181  YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVVQSWQVAF 240

Query: 613  NWEQGLNFQVRDVRARVLTDMAWVTMKTYVDMDTGPFNVTNVFEFHNGRWYMVHHHSSVM 434
            NWEQG+NFQVRDVRARVLTDMAWV+MKTYVDMDTGPFNVTN++EFHNGRWYMVHHHSSVM
Sbjct: 241  NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM 300

Query: 433  --NGEVDHHIVHG 401
               GE++  +VHG
Sbjct: 301  LIVGEMEQQMVHG 313


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