BLASTX nr result

ID: Glycyrrhiza23_contig00014577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014577
         (831 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK35075.1| unknown [Lotus japonicus]                              305   1e-80
ref|XP_003521329.1| PREDICTED: arginine/serine-rich-splicing fac...   297   2e-78
gb|ACU23673.1| unknown [Glycine max]                                  241   5e-78
ref|XP_003528886.1| PREDICTED: arginine/serine-rich-splicing fac...   295   9e-78
gb|AFK44835.1| unknown [Medicago truncatula]                          285   7e-75

>gb|AFK35075.1| unknown [Lotus japonicus]
          Length = 249

 Score =  305 bits (780), Expect = 1e-80
 Identities = 152/201 (75%), Positives = 161/201 (80%)
 Frame = -1

Query: 831 GFAFIYMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQEXXXXXXXXXXXXSTNTRPSK 652
           GFAF+YMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQE            ++N +PSK
Sbjct: 36  GFAFVYMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQERDSRRSADSRKPASNMKPSK 95

Query: 651 TLFVINFDPVHTRTRDLERHFDPYGKISNIRVRRNFAFIQYETQEDATRALDATNLSKFM 472
           TLF+INFDPVHTRTRDLERHFDPYGKISNIR+RRNFAFIQYE+ EDATRAL+ATNLSKFM
Sbjct: 96  TLFIINFDPVHTRTRDLERHFDPYGKISNIRIRRNFAFIQYESLEDATRALEATNLSKFM 155

Query: 471 DRVITVEYAIRDDDDRRNGYSPDRRGHXXXXXXXXXXXXXXXXXXXXXXXDYGHGSNPAS 292
           DRVITVEYAIRDDDDRR+G SPDRRG                        DYGHGSNPAS
Sbjct: 156 DRVITVEYAIRDDDDRRDGQSPDRRGRVSPDGRYGRGRSPSPYRRGRGSPDYGHGSNPAS 215

Query: 291 RPEPRGSPKYERAESPINGRY 229
           RPEPRGSPKYERAESP NGRY
Sbjct: 216 RPEPRGSPKYERAESPQNGRY 236


>ref|XP_003521329.1| PREDICTED: arginine/serine-rich-splicing factor RSP41-like [Glycine
           max]
          Length = 252

 Score =  297 bits (760), Expect = 2e-78
 Identities = 153/204 (75%), Positives = 163/204 (79%), Gaps = 3/204 (1%)
 Frame = -1

Query: 831 GFAFIYMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQEXXXXXXXXXXXXST-NTRPS 655
           GFAF+YMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQE            S+ N+RPS
Sbjct: 36  GFAFVYMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQERDSRRSGGDSRKSSSNSRPS 95

Query: 654 KTLFVINFDPVHTRTRDLERHFDPYGKISNIRVRRNFAFIQYETQEDATRALDATNLSKF 475
           KTLFVINFDPV+ RTRDLERHFD YGKI NIR+RRNFAFIQ+E+QEDATRAL+ATNLSKF
Sbjct: 96  KTLFVINFDPVNARTRDLERHFDSYGKILNIRIRRNFAFIQFESQEDATRALEATNLSKF 155

Query: 474 MDRVITVEYAIRDDD--DRRNGYSPDRRGHXXXXXXXXXXXXXXXXXXXXXXXDYGHGSN 301
           MDRVITVEYAIRDDD  DRRNGYSPDRRGH                       DYGHGSN
Sbjct: 156 MDRVITVEYAIRDDDDRDRRNGYSPDRRGHDSPDGRYGRGRSPSPYRRGRGSPDYGHGSN 215

Query: 300 PASRPEPRGSPKYERAESPINGRY 229
           P+SRPEPRGSPKY+RAESPINGRY
Sbjct: 216 PSSRPEPRGSPKYDRAESPINGRY 239


>gb|ACU23673.1| unknown [Glycine max]
          Length = 234

 Score =  241 bits (615), Expect(2) = 5e-78
 Identities = 123/148 (83%), Positives = 130/148 (87%), Gaps = 3/148 (2%)
 Frame = -1

Query: 831 GFAFIYMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQEXXXXXXXXXXXXST-NTRPS 655
           GFAF+YMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQE            S+ N+RPS
Sbjct: 36  GFAFVYMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQERDSRRSGGDSRKSSSNSRPS 95

Query: 654 KTLFVINFDPVHTRTRDLERHFDPYGKISNIRVRRNFAFIQYETQEDATRALDATNLSKF 475
           KTLFVINFDPVH RTRDLERHFD YGKI NIR+RRNFAFIQ+E+QEDATRAL+ATNLSKF
Sbjct: 96  KTLFVINFDPVHARTRDLERHFDSYGKILNIRIRRNFAFIQFESQEDATRALEATNLSKF 155

Query: 474 MDRVITVEYAIRDDD--DRRNGYSPDRR 397
           MDRVITVEYAIRDDD  DRRNGYSPDRR
Sbjct: 156 MDRVITVEYAIRDDDDRDRRNGYSPDRR 183



 Score = 77.0 bits (188), Expect(2) = 5e-78
 Identities = 42/55 (76%), Positives = 42/55 (76%)
 Frame = -2

Query: 407 PIEEVMTPLMGDMVVADPQVHIVEVGVAQIMVMDQIQLPGQNQEEAPSMNGLKAQ 243
           P    MT LMGDMVV DP V IVEVGVAQIMVMDQI LP Q QEEAPSMN  KAQ
Sbjct: 180 PDRRAMTLLMGDMVVVDPLVLIVEVGVAQIMVMDQIHLPDQIQEEAPSMNEPKAQ 234


>ref|XP_003528886.1| PREDICTED: arginine/serine-rich-splicing factor RSP41-like [Glycine
           max]
          Length = 253

 Score =  295 bits (755), Expect = 9e-78
 Identities = 154/205 (75%), Positives = 163/205 (79%), Gaps = 4/205 (1%)
 Frame = -1

Query: 831 GFAFIYMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQEXXXXXXXXXXXXST-NTRPS 655
           GFAF+YMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQE            S+ N+RPS
Sbjct: 36  GFAFVYMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQERDSRRSGGDSRKSSSNSRPS 95

Query: 654 KTLFVINFDPVHTRTRDLERHFDPYGKISNIRVRRNFAFIQYETQEDATRALDATNLSKF 475
           KTLFVINFDPVH RTRDLERHFD YGKI NIR+RRNFAFIQ+E+QEDATRAL+ATNLSKF
Sbjct: 96  KTLFVINFDPVHARTRDLERHFDSYGKILNIRIRRNFAFIQFESQEDATRALEATNLSKF 155

Query: 474 MDRVITVEYAIRDDD--DRRNGYSPDRRGHXXXXXXXXXXXXXXXXXXXXXXXDYGHGSN 301
           MDRVITVEYAIRDDD  DRRNGYSPDRRGH                       DYGHGSN
Sbjct: 156 MDRVITVEYAIRDDDDRDRRNGYSPDRRGHDSPDGRYGRGRSPSPYRRGRGSPDYGHGSN 215

Query: 300 PASRPEPRGSPKYERAESPI-NGRY 229
           P+SRP+PRGSPKYERAESPI NGRY
Sbjct: 216 PSSRPDPRGSPKYERAESPINNGRY 240


>gb|AFK44835.1| unknown [Medicago truncatula]
          Length = 294

 Score =  285 bits (730), Expect = 7e-75
 Identities = 149/211 (70%), Positives = 160/211 (75%), Gaps = 10/211 (4%)
 Frame = -1

Query: 831 GFAFIYMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQEXXXXXXXXXXXXS-TNTRPS 655
           GFAFIYMEDERDAEYAIRRLD+TEFGRKGRRIRV WTK E            S TNT+PS
Sbjct: 36  GFAFIYMEDERDAEYAIRRLDQTEFGRKGRRIRVGWTKAERDNRRSGGDSKKSSTNTKPS 95

Query: 654 KTLFVINFDPVHTRTRDLERHFDPYGKISNIRVRRNFAFIQYETQEDATRALDATNLSKF 475
           KTLF+INFDPVHTRTRDLERHFDPYGKISN+R+RRNFAFIQ+ETQE+AT+AL+ATNLSKF
Sbjct: 96  KTLFIINFDPVHTRTRDLERHFDPYGKISNLRIRRNFAFIQFETQEEATKALEATNLSKF 155

Query: 474 MDRVITVEYAIRDDDDRRNGYSPDRR---------GHXXXXXXXXXXXXXXXXXXXXXXX 322
           MDRVITVEYAIRDDD +R+GYSPDRR         G                        
Sbjct: 156 MDRVITVEYAIRDDDVKRDGYSPDRRGRGSPDGRYGRGSPDGRYGRGRSPSPYRRGRGSP 215

Query: 321 DYGHGSNPASRPEPRGSPKYERAESPINGRY 229
           DYG GSNPASRPEPRGSPKYERAESP NGRY
Sbjct: 216 DYGRGSNPASRPEPRGSPKYERAESPANGRY 246


Top