BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014573
         (579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556106.1| PREDICTED: pentatricopeptide repeat-containi...   371   e-101
ref|XP_003535615.1| PREDICTED: pentatricopeptide repeat-containi...   370   e-101
emb|CBI22748.3| unnamed protein product [Vitis vinifera]              327   7e-88
ref|XP_002268211.1| PREDICTED: pentatricopeptide repeat-containi...   327   7e-88
ref|XP_002510791.1| pentatricopeptide repeat-containing protein,...   316   2e-84

>ref|XP_003556106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like isoform 1 [Glycine max]
           gi|356575967|ref|XP_003556107.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g60050-like isoform 2 [Glycine max]
          Length = 480

 Score =  371 bits (952), Expect = e-101
 Identities = 180/192 (93%), Positives = 184/192 (95%)
 Frame = -2

Query: 578 LVDEMIEKGFPATARTFNILIRTCGEAGLAKKLVERFIKTKAFNYRPFKHSYNAILHGLL 399
           LVDEMIEKG PATARTFNILIRTCGEAGLAK LVERFIK+K FN+RPFKHSYNAILHGLL
Sbjct: 178 LVDEMIEKGLPATARTFNILIRTCGEAGLAKNLVERFIKSKTFNFRPFKHSYNAILHGLL 237

Query: 398 VLNQYKLIEWVYQQMLLEGFPSDILTYNIVMYAKYRLGKLDQFHILLDEMGRNGLSPDFH 219
           VLNQYKLIEWVYQQMLL+GFPSDILTYNIVMYAKYRLGKLDQFH LLDEMGRNG SPDFH
Sbjct: 238 VLNQYKLIEWVYQQMLLDGFPSDILTYNIVMYAKYRLGKLDQFHRLLDEMGRNGFSPDFH 297

Query: 218 TYNILLHVLGKGDKPLAALNLLNHMREAGIEPTVLHFTTLIDGLSRAGNLDACKYFFDEM 39
           T+NILLHVLGKGDKPLAALNLLNHMRE GIEPTVLHFTTLIDGLSRAGNLDACKYFFDEM
Sbjct: 298 TFNILLHVLGKGDKPLAALNLLNHMREMGIEPTVLHFTTLIDGLSRAGNLDACKYFFDEM 357

Query: 38  IKNGCMPDVVAY 3
           IKN C PDVVAY
Sbjct: 358 IKNECRPDVVAY 369


>ref|XP_003535615.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like [Glycine max]
          Length = 480

 Score =  370 bits (950), Expect = e-101
 Identities = 178/192 (92%), Positives = 185/192 (96%)
 Frame = -2

Query: 578 LVDEMIEKGFPATARTFNILIRTCGEAGLAKKLVERFIKTKAFNYRPFKHSYNAILHGLL 399
           LVDEM+EKG PATARTFNILIRTCGEAGLAK LVERFIK+K FN+RPFKHSYNAILHGLL
Sbjct: 178 LVDEMVEKGLPATARTFNILIRTCGEAGLAKSLVERFIKSKTFNFRPFKHSYNAILHGLL 237

Query: 398 VLNQYKLIEWVYQQMLLEGFPSDILTYNIVMYAKYRLGKLDQFHILLDEMGRNGLSPDFH 219
           VLNQYKLIEWVYQQ+LL+GF SDILTYNIVMYAKYRLGKLDQFH LLDEMGRNG SPDFH
Sbjct: 238 VLNQYKLIEWVYQQLLLDGFSSDILTYNIVMYAKYRLGKLDQFHRLLDEMGRNGFSPDFH 297

Query: 218 TYNILLHVLGKGDKPLAALNLLNHMREAGIEPTVLHFTTLIDGLSRAGNLDACKYFFDEM 39
           T+NILLHVLGKGDKPLAALNLLNHMRE GIEPTVLHFTTLIDGLSRAGNLDACKYFFDEM
Sbjct: 298 TFNILLHVLGKGDKPLAALNLLNHMREMGIEPTVLHFTTLIDGLSRAGNLDACKYFFDEM 357

Query: 38  IKNGCMPDVVAY 3
           IKNGC+PDVVAY
Sbjct: 358 IKNGCIPDVVAY 369



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 40/189 (21%), Positives = 73/189 (38%)
 Frame = -2

Query: 578 LVDEMIEKGFPATARTFNILIRTCGEAGLAKKLVERFIKTKAFNYRPFKHSYNAILHGLL 399
           L+DEM   GF     TFNIL+   G+       +      +     P    +  ++ GL 
Sbjct: 283 LLDEMGRNGFSPDFHTFNILLHVLGKGDKPLAALNLLNHMREMGIEPTVLHFTTLIDGLS 342

Query: 398 VLNQYKLIEWVYQQMLLEGFPSDILTYNIVMYAKYRLGKLDQFHILLDEMGRNGLSPDFH 219
                   ++ + +M+  G   D++ Y +++      G++++   +   M      P+  
Sbjct: 343 RAGNLDACKYFFDEMIKNGCIPDVVAYTVMITGYVVAGEIEKALKMYQYMISREQVPNVF 402

Query: 218 TYNILLHVLGKGDKPLAALNLLNHMREAGIEPTVLHFTTLIDGLSRAGNLDACKYFFDEM 39
           TYN ++  L    K   A ++L  M+  G  P    + TL   L  AG          +M
Sbjct: 403 TYNSIIQGLCMAGKFDEACSMLKEMKTKGCSPNSFVYNTLASCLRNAGKTADAHEVIRQM 462

Query: 38  IKNGCMPDV 12
            + G   D+
Sbjct: 463 TEKGKYADI 471


>emb|CBI22748.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score =  327 bits (839), Expect = 7e-88
 Identities = 156/192 (81%), Positives = 172/192 (89%)
 Frame = -2

Query: 578 LVDEMIEKGFPATARTFNILIRTCGEAGLAKKLVERFIKTKAFNYRPFKHSYNAILHGLL 399
           LVDEMIE+GFP TARTF ILI TCGEAGLA++ VERF+K+K FNYRPFKHSYNAILH LL
Sbjct: 215 LVDEMIEQGFPVTARTFQILICTCGEAGLARRAVERFVKSKNFNYRPFKHSYNAILHCLL 274

Query: 398 VLNQYKLIEWVYQQMLLEGFPSDILTYNIVMYAKYRLGKLDQFHILLDEMGRNGLSPDFH 219
            L QYKL+EWVYQQMLLE +  DILTYNIVM  KYRLGKLDQFH LL+E+G NG SPDFH
Sbjct: 275 CLKQYKLVEWVYQQMLLEDYSPDILTYNIVMCTKYRLGKLDQFHRLLEELGTNGFSPDFH 334

Query: 218 TYNILLHVLGKGDKPLAALNLLNHMREAGIEPTVLHFTTLIDGLSRAGNLDACKYFFDEM 39
           T+NILLH+LGKG+KPLAAL+LLNHM+E G +P+VLHFTTLIDGLSRAGNLDACKYFFDEM
Sbjct: 335 TFNILLHLLGKGNKPLAALDLLNHMKEVGFDPSVLHFTTLIDGLSRAGNLDACKYFFDEM 394

Query: 38  IKNGCMPDVVAY 3
           IK GCMPDVV Y
Sbjct: 395 IKLGCMPDVVCY 406



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 44/184 (23%), Positives = 77/184 (41%)
 Frame = -2

Query: 578 LVDEMIEKGFPATARTFNILIRTCGEAGLAKKLVERFIKTKAFNYRPFKHSYNAILHGLL 399
           L++E+   GF     TFNIL+   G+       ++     K   + P    +  ++ GL 
Sbjct: 320 LLEELGTNGFSPDFHTFNILLHLLGKGNKPLAALDLLNHMKEVGFDPSVLHFTTLIDGLS 379

Query: 398 VLNQYKLIEWVYQQMLLEGFPSDILTYNIVMYAKYRLGKLDQFHILLDEMGRNGLSPDFH 219
                   ++ + +M+  G   D++ Y +++      G+L+    L +EM   G  P+  
Sbjct: 380 RAGNLDACKYFFDEMIKLGCMPDVVCYTVMITGYIVAGELEMAQGLFEEMTVKGQLPNVF 439

Query: 218 TYNILLHVLGKGDKPLAALNLLNHMREAGIEPTVLHFTTLIDGLSRAGNLDACKYFFDEM 39
           TYN ++  L   +K   A ++L  M   G  P  L + TL+  L  AG L         M
Sbjct: 440 TYNSMIRGLCMAEKFEEARSMLKEMESRGCNPNFLVYNTLVGNLRNAGKLKEAHEVIRHM 499

Query: 38  IKNG 27
           +  G
Sbjct: 500 VDKG 503


>ref|XP_002268211.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g55630-like [Vitis vinifera]
          Length = 514

 Score =  327 bits (839), Expect = 7e-88
 Identities = 156/192 (81%), Positives = 172/192 (89%)
 Frame = -2

Query: 578 LVDEMIEKGFPATARTFNILIRTCGEAGLAKKLVERFIKTKAFNYRPFKHSYNAILHGLL 399
           LVDEMIE+GFP TARTF ILI TCGEAGLA++ VERF+K+K FNYRPFKHSYNAILH LL
Sbjct: 211 LVDEMIEQGFPVTARTFQILICTCGEAGLARRAVERFVKSKNFNYRPFKHSYNAILHCLL 270

Query: 398 VLNQYKLIEWVYQQMLLEGFPSDILTYNIVMYAKYRLGKLDQFHILLDEMGRNGLSPDFH 219
            L QYKL+EWVYQQMLLE +  DILTYNIVM  KYRLGKLDQFH LL+E+G NG SPDFH
Sbjct: 271 CLKQYKLVEWVYQQMLLEDYSPDILTYNIVMCTKYRLGKLDQFHRLLEELGTNGFSPDFH 330

Query: 218 TYNILLHVLGKGDKPLAALNLLNHMREAGIEPTVLHFTTLIDGLSRAGNLDACKYFFDEM 39
           T+NILLH+LGKG+KPLAAL+LLNHM+E G +P+VLHFTTLIDGLSRAGNLDACKYFFDEM
Sbjct: 331 TFNILLHLLGKGNKPLAALDLLNHMKEVGFDPSVLHFTTLIDGLSRAGNLDACKYFFDEM 390

Query: 38  IKNGCMPDVVAY 3
           IK GCMPDVV Y
Sbjct: 391 IKLGCMPDVVCY 402



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 44/184 (23%), Positives = 77/184 (41%)
 Frame = -2

Query: 578 LVDEMIEKGFPATARTFNILIRTCGEAGLAKKLVERFIKTKAFNYRPFKHSYNAILHGLL 399
           L++E+   GF     TFNIL+   G+       ++     K   + P    +  ++ GL 
Sbjct: 316 LLEELGTNGFSPDFHTFNILLHLLGKGNKPLAALDLLNHMKEVGFDPSVLHFTTLIDGLS 375

Query: 398 VLNQYKLIEWVYQQMLLEGFPSDILTYNIVMYAKYRLGKLDQFHILLDEMGRNGLSPDFH 219
                   ++ + +M+  G   D++ Y +++      G+L+    L +EM   G  P+  
Sbjct: 376 RAGNLDACKYFFDEMIKLGCMPDVVCYTVMITGYIVAGELEMAQGLFEEMTVKGQLPNVF 435

Query: 218 TYNILLHVLGKGDKPLAALNLLNHMREAGIEPTVLHFTTLIDGLSRAGNLDACKYFFDEM 39
           TYN ++  L   +K   A ++L  M   G  P  L + TL+  L  AG L         M
Sbjct: 436 TYNSMIRGLCMAEKFEEARSMLKEMESRGCNPNFLVYNTLVGNLRNAGKLKEAHEVIRHM 495

Query: 38  IKNG 27
           +  G
Sbjct: 496 VDKG 499


>ref|XP_002510791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549906|gb|EEF51393.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 475

 Score =  316 bits (810), Expect = 2e-84
 Identities = 150/192 (78%), Positives = 169/192 (88%)
 Frame = -2

Query: 578 LVDEMIEKGFPATARTFNILIRTCGEAGLAKKLVERFIKTKAFNYRPFKHSYNAILHGLL 399
           L+DEM+E GFP TARTFNILI TCG AGLA+K+VERFIK+K FNYRPFKHSYNAIL  LL
Sbjct: 176 LLDEMVENGFPTTARTFNILICTCGGAGLARKVVERFIKSKTFNYRPFKHSYNAILLSLL 235

Query: 398 VLNQYKLIEWVYQQMLLEGFPSDILTYNIVMYAKYRLGKLDQFHILLDEMGRNGLSPDFH 219
            + +YKLIEWV+QQML+EG+  D LTYNI+M AKYRLGKL  FH LLDEMGR+G SPDFH
Sbjct: 236 AIREYKLIEWVHQQMLVEGYCPDTLTYNILMCAKYRLGKLHHFHRLLDEMGRSGFSPDFH 295

Query: 218 TYNILLHVLGKGDKPLAALNLLNHMREAGIEPTVLHFTTLIDGLSRAGNLDACKYFFDEM 39
           TYNILLHVLGKG+KP+AAL LLNHM+E G +P++LHFTTLIDGLSRAGNLDAC YFFDEM
Sbjct: 296 TYNILLHVLGKGNKPIAALKLLNHMKEIGFDPSILHFTTLIDGLSRAGNLDACNYFFDEM 355

Query: 38  IKNGCMPDVVAY 3
           IKNG +PDVV Y
Sbjct: 356 IKNGFVPDVVCY 367



 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 48/184 (26%), Positives = 81/184 (44%)
 Frame = -2

Query: 578 LVDEMIEKGFPATARTFNILIRTCGEAGLAKKLVERFIKTKAFNYRPFKHSYNAILHGLL 399
           L+DEM   GF     T+NIL+   G+       ++     K   + P    +  ++ GL 
Sbjct: 281 LLDEMGRSGFSPDFHTYNILLHVLGKGNKPIAALKLLNHMKEIGFDPSILHFTTLIDGLS 340

Query: 398 VLNQYKLIEWVYQQMLLEGFPSDILTYNIVMYAKYRLGKLDQFHILLDEMGRNGLSPDFH 219
                    + + +M+  GF  D++ Y +++      G+L++   + DEM   G  P+  
Sbjct: 341 RAGNLDACNYFFDEMIKNGFVPDVVCYTVMITGYIVAGELEKAREIFDEMIARGQLPNVF 400

Query: 218 TYNILLHVLGKGDKPLAALNLLNHMREAGIEPTVLHFTTLIDGLSRAGNLDACKYFFDEM 39
           TYN ++  L    K   A  +L  M   G +P  L + TL++ L  AG L   +    EM
Sbjct: 401 TYNSMIRGLCMAGKFEEARCMLKEMGSRGCKPNFLVYNTLVNNLRNAGKLSEAREVIKEM 460

Query: 38  IKNG 27
            +NG
Sbjct: 461 AENG 464