BLASTX nr result

ID: Glycyrrhiza23_contig00014541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014541
         (1729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551427.1| PREDICTED: putative ribosome biogenesis GTPa...   731   0.0  
ref|XP_003601802.1| hypothetical protein MTR_3g085550 [Medicago ...   726   0.0  
ref|XP_003538555.1| PREDICTED: putative ribosome biogenesis GTPa...   716   0.0  
ref|XP_004144195.1| PREDICTED: putative ribosome biogenesis GTPa...   692   0.0  
ref|XP_002514929.1| GTP binding protein, putative [Ricinus commu...   667   0.0  

>ref|XP_003551427.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like [Glycine
            max]
          Length = 473

 Score =  731 bits (1886), Expect = 0.0
 Identities = 384/480 (80%), Positives = 409/480 (85%), Gaps = 2/480 (0%)
 Frame = -3

Query: 1685 MSSLASFSIXXXXXXXXXXXXXXXXRFRCLPISAA-RQQNP-KQLSPNKNFLKAKHTLKD 1512
            MS  +SFS+                RFRCL I+A  +QQNP KQ  P++N LKAK TLK+
Sbjct: 1    MSFASSFSMLRHRAAASAAPLLLLRRFRCLRIAARHQQQNPNKQAPPSRNLLKAKQTLKE 60

Query: 1511 FSSLAPILSHEDSPPLSESQAVGIVASSQANFMRVIVHSLPEEPSGSFRESLGGVELLCV 1332
            FSSLAP+LS E SPPL+ESQA+G+VA+SQANFMRVIV    +EPSGSFR    GVE+LCV
Sbjct: 61   FSSLAPVLSLEASPPLTESQAIGVVAASQANFMRVIVPE-NDEPSGSFR----GVEILCV 115

Query: 1331 VRALLKKIKRRVMVGDKVLVGSIDWVDRRGMIENVFQRNSEILDPPVANVDHLLVLFSLE 1152
            VRALLKKIKRRVMVGDKVLVGSIDWVDRRGMIENVF R SEILDPPVANVD LLVLFSLE
Sbjct: 116  VRALLKKIKRRVMVGDKVLVGSIDWVDRRGMIENVFHRTSEILDPPVANVDQLLVLFSLE 175

Query: 1151 QPRLEPFTLTRFLVEAESTGIPLTLALNKTELVDNETAGSWKARLRDWGYEPIFCSVESG 972
            QP+ EPFTLTRFLVEAESTGIPLTLALNKTELVDNE   SWKARLR WGYEP+FCSVESG
Sbjct: 176  QPKPEPFTLTRFLVEAESTGIPLTLALNKTELVDNEIISSWKARLRSWGYEPVFCSVESG 235

Query: 971  HNLDLLAFKLRDQTTVIVGPSGVGKSSLINALRGNLRVCDAAEGENWFEPILGSKWFEDQ 792
            H LDLL FKLRDQTTVIVGPSGVGKSSLINALR N    +AAEGENWFEP+LGSKW EDQ
Sbjct: 236  HGLDLLGFKLRDQTTVIVGPSGVGKSSLINALRSN--PSNAAEGENWFEPVLGSKWLEDQ 293

Query: 791  RVGEVSTRSGRGKHTTRHVTLLPLSGGGYLADTPGFNQPSLLKVTKQSLAQTFPEIRKML 612
            RVGEVSTRSGRGKHTTRHV+LLPLS GG+LADTPGFNQPSLLKVTKQSLAQTFPEIRKML
Sbjct: 294  RVGEVSTRSGRGKHTTRHVSLLPLSEGGFLADTPGFNQPSLLKVTKQSLAQTFPEIRKML 353

Query: 611  SANESAKCSFNNCLHLGEPGCIVKGDWERYSFYFQLLDEIKIREEFQLRTFGTKREGDVR 432
            SA+E  KCSFNNCLHLGEPGCIVKGDWERYS+YFQLLDEI+IREEFQLRTFGTKREGDVR
Sbjct: 354  SASEIEKCSFNNCLHLGEPGCIVKGDWERYSYYFQLLDEIRIREEFQLRTFGTKREGDVR 413

Query: 431  LKIGDMGVQQAEPRLEPKKHRRQSRKRINQSIXXXXXXXXXXXXXXXXDPILRALKNENS 252
            LK+GDMGVQQAEPRLEPKKHRRQSRKRINQSI                DPILRAL+NENS
Sbjct: 414  LKMGDMGVQQAEPRLEPKKHRRQSRKRINQSILDELDDDDDNLLDEENDPILRALRNENS 473


>ref|XP_003601802.1| hypothetical protein MTR_3g085550 [Medicago truncatula]
            gi|355490850|gb|AES72053.1| hypothetical protein
            MTR_3g085550 [Medicago truncatula]
          Length = 471

 Score =  726 bits (1873), Expect = 0.0
 Identities = 375/477 (78%), Positives = 404/477 (84%), Gaps = 2/477 (0%)
 Frame = -3

Query: 1679 SLASFSIXXXXXXXXXXXXXXXXRFRCLPISAARQQNPKQLSPNKNFLKAKHTLKDFSSL 1500
            SLASFSI                 F+     +AR QNPK  +P+KN LKAK TLKDFSSL
Sbjct: 2    SLASFSIIRHQRTVATAAPRLLHHFQI----SARNQNPKHEAPSKNLLKAKRTLKDFSSL 57

Query: 1499 APILSHEDSPPLSESQAVGIVASSQANFMRVIVHSLPEEPSGSFRE--SLGGVELLCVVR 1326
            A ILS E++PPLSESQAVG+VASSQANFMRVIV S   +PSG+F++  S GG ELLCVVR
Sbjct: 58   ALILSREETPPLSESQAVGVVASSQANFMRVIVQS---QPSGTFQDASSRGGAELLCVVR 114

Query: 1325 ALLKKIKRRVMVGDKVLVGSIDWVDRRGMIENVFQRNSEILDPPVANVDHLLVLFSLEQP 1146
            ALLKKIKRRVMVGDKVLVGS+DWVDRR MIENVFQRNSE+LDPPVANVDHLLVLFSL+QP
Sbjct: 115  ALLKKIKRRVMVGDKVLVGSVDWVDRRAMIENVFQRNSEMLDPPVANVDHLLVLFSLDQP 174

Query: 1145 RLEPFTLTRFLVEAESTGIPLTLALNKTELVDNETAGSWKARLRDWGYEPIFCSVESGHN 966
            +LEPFTLTRFLVEAESTGIPLTLALNKTELVD ET  SWKAR R WGY+PIFCSVESGHN
Sbjct: 175  KLEPFTLTRFLVEAESTGIPLTLALNKTELVDKETMDSWKARFRGWGYQPIFCSVESGHN 234

Query: 965  LDLLAFKLRDQTTVIVGPSGVGKSSLINALRGNLRVCDAAEGENWFEPILGSKWFEDQRV 786
            +DLLAF+LRDQTTV+VGPSGVGKSSLINALR N R CD A+GENWFEPILGSKW++DQRV
Sbjct: 235  IDLLAFQLRDQTTVVVGPSGVGKSSLINALRSNPRTCDTADGENWFEPILGSKWYDDQRV 294

Query: 785  GEVSTRSGRGKHTTRHVTLLPLSGGGYLADTPGFNQPSLLKVTKQSLAQTFPEIRKMLSA 606
             EVSTRSGRGKHTTRHV+LLPLSGGGYLADTPGFNQPSLLKVTKQSLAQTFPEIRKMLS 
Sbjct: 295  AEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLLKVTKQSLAQTFPEIRKMLSG 354

Query: 605  NESAKCSFNNCLHLGEPGCIVKGDWERYSFYFQLLDEIKIREEFQLRTFGTKREGDVRLK 426
            NES KCSFNNCLHLGEPGCIVKGDWERYSFYFQLLDEI+IREEFQLRTFGTKRE DVRL+
Sbjct: 355  NESTKCSFNNCLHLGEPGCIVKGDWERYSFYFQLLDEIRIREEFQLRTFGTKRESDVRLR 414

Query: 425  IGDMGVQQAEPRLEPKKHRRQSRKRINQSIXXXXXXXXXXXXXXXXDPILRALKNEN 255
             G+MG QQAEPRL  KKHRRQSRK+ NQSI                DP+L AL+NEN
Sbjct: 415  TGNMGSQQAEPRLVLKKHRRQSRKKTNQSI-LDDLDDDDNLLDEENDPLLNALRNEN 470


>ref|XP_003538555.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like [Glycine
            max]
          Length = 475

 Score =  716 bits (1847), Expect = 0.0
 Identities = 371/456 (81%), Positives = 396/456 (86%), Gaps = 6/456 (1%)
 Frame = -3

Query: 1685 MSSLASFSIXXXXXXXXXXXXXXXXRFRCLPISAAR----QQNPKQ--LSPNKNFLKAKH 1524
            MS  +SFS+                RFRCLP  AAR    QQNP +   +P++N LKAK 
Sbjct: 1    MSFASSFSMLRHRAVAAYAPTLLLRRFRCLPTIAARHQQQQQNPNKQAAAPSRNLLKAKQ 60

Query: 1523 TLKDFSSLAPILSHEDSPPLSESQAVGIVASSQANFMRVIVHSLPEEPSGSFRESLGGVE 1344
            TLK++S LAP+LS EDSPPL+ESQA+G+VA+SQANFMRVIV    +EPSGSFR    GVE
Sbjct: 61   TLKEYSCLAPVLSLEDSPPLTESQAIGVVAASQANFMRVIVPE-NDEPSGSFR----GVE 115

Query: 1343 LLCVVRALLKKIKRRVMVGDKVLVGSIDWVDRRGMIENVFQRNSEILDPPVANVDHLLVL 1164
            +LCVVRALLKKIKRRVMVGDKVLVGSIDWVDRRGMIENVFQR SEILDPPVANVD LLVL
Sbjct: 116  ILCVVRALLKKIKRRVMVGDKVLVGSIDWVDRRGMIENVFQRTSEILDPPVANVDQLLVL 175

Query: 1163 FSLEQPRLEPFTLTRFLVEAESTGIPLTLALNKTELVDNETAGSWKARLRDWGYEPIFCS 984
            FSLE P+ EPFTLTRFLVEAESTGIPL LALNKTELVDNE   SWKARLR WGYEP+FCS
Sbjct: 176  FSLEHPKPEPFTLTRFLVEAESTGIPLMLALNKTELVDNEIISSWKARLRSWGYEPVFCS 235

Query: 983  VESGHNLDLLAFKLRDQTTVIVGPSGVGKSSLINALRGNLRVCDAAEGENWFEPILGSKW 804
            VESGH LDLL +KLRDQTTVIVGPSGVGKSSLINALR N    DAAEG+NWFEPILGSKW
Sbjct: 236  VESGHGLDLLGYKLRDQTTVIVGPSGVGKSSLINALRSN--PSDAAEGDNWFEPILGSKW 293

Query: 803  FEDQRVGEVSTRSGRGKHTTRHVTLLPLSGGGYLADTPGFNQPSLLKVTKQSLAQTFPEI 624
             EDQRVGEVSTRSGRGKHTTRHV+LLPLS GG+LADTPGFNQPSLLKVTKQSLAQTFPEI
Sbjct: 294  LEDQRVGEVSTRSGRGKHTTRHVSLLPLSEGGFLADTPGFNQPSLLKVTKQSLAQTFPEI 353

Query: 623  RKMLSANESAKCSFNNCLHLGEPGCIVKGDWERYSFYFQLLDEIKIREEFQLRTFGTKRE 444
            RKMLSANE+ KCSFNNCLHLGEPGCIVKGDWERYS+YFQLLDEI+IREEFQLRTFGTKRE
Sbjct: 354  RKMLSANETEKCSFNNCLHLGEPGCIVKGDWERYSYYFQLLDEIRIREEFQLRTFGTKRE 413

Query: 443  GDVRLKIGDMGVQQAEPRLEPKKHRRQSRKRINQSI 336
            GDVRLK+GDMGVQQAEPRLEPKKHRRQSRK INQSI
Sbjct: 414  GDVRLKMGDMGVQQAEPRLEPKKHRRQSRKSINQSI 449


>ref|XP_004144195.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like [Cucumis
            sativus] gi|449489232|ref|XP_004158254.1| PREDICTED:
            putative ribosome biogenesis GTPase RsgA-like [Cucumis
            sativus]
          Length = 504

 Score =  692 bits (1785), Expect = 0.0
 Identities = 348/470 (74%), Positives = 397/470 (84%), Gaps = 19/470 (4%)
 Frame = -3

Query: 1607 FRCLPISAARQQNPKQLS----PNKNFLKAKHTLKDFSSLAPILSHEDSPPLSESQAVGI 1440
            FRC  I  A+Q NP  +S    P+KN L+AKHT KD+SSLAP+LS +D+PPLSESQA+G 
Sbjct: 35   FRCFSI-VAKQHNPNNVSNKPPPSKNLLRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGT 93

Query: 1439 VASSQANFMRVIVHSLPE----------EPSGSFRE-----SLGGVELLCVVRALLKKIK 1305
            VA++QANFMRVIV +LP           E SGS  +     S+ GVELLCVV+A+LKKIK
Sbjct: 94   VAAAQANFMRVIVQTLPSQFSQSPNDDLERSGSLEDDSSKSSMLGVELLCVVKAVLKKIK 153

Query: 1304 RRVMVGDKVLVGSIDWVDRRGMIENVFQRNSEILDPPVANVDHLLVLFSLEQPRLEPFTL 1125
            RRV+VGDKV+VGSIDWVDRRGMIENVFQR+SEILDPPVANVDHLLVLFS++QPRLEPFTL
Sbjct: 154  RRVLVGDKVVVGSIDWVDRRGMIENVFQRSSEILDPPVANVDHLLVLFSMDQPRLEPFTL 213

Query: 1124 TRFLVEAESTGIPLTLALNKTELVDNETAGSWKARLRDWGYEPIFCSVESGHNLDLLAFK 945
            TRFLVEAESTGIPLTL LNK ELVD ET  SWK+RLR WGY+P+FCSV++G  LD LAF 
Sbjct: 214  TRFLVEAESTGIPLTLGLNKLELVDEETLVSWKSRLRSWGYDPLFCSVQTGAGLDSLAFI 273

Query: 944  LRDQTTVIVGPSGVGKSSLINALRGNLRVCDAAEGENWFEPILGSKWFEDQRVGEVSTRS 765
            LRDQTTVIVGPSGVGKSSLINALR + R  DA++ +NWF+PILGSKWFE+QRV EVSTRS
Sbjct: 274  LRDQTTVIVGPSGVGKSSLINALRNSNRATDASDTDNWFDPILGSKWFEEQRVAEVSTRS 333

Query: 764  GRGKHTTRHVTLLPLSGGGYLADTPGFNQPSLLKVTKQSLAQTFPEIRKMLSANESAKCS 585
            GRGKHTTRHV+LLPLSGGGYLADTPGFNQPSL+K+TKQSLAQ FPEI+KML A+E AKCS
Sbjct: 334  GRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLMKITKQSLAQAFPEIQKMLHASEPAKCS 393

Query: 584  FNNCLHLGEPGCIVKGDWERYSFYFQLLDEIKIREEFQLRTFGTKREGDVRLKIGDMGVQ 405
            FN+CLHLGEPGC++KGDWERY +YFQLLDEI+IREEFQLRTFGTKREGDVR+K+G+MGV+
Sbjct: 394  FNDCLHLGEPGCVIKGDWERYQYYFQLLDEIRIREEFQLRTFGTKREGDVRIKVGEMGVK 453

Query: 404  QAEPRLEPKKHRRQSRKRINQSIXXXXXXXXXXXXXXXXDPILRALKNEN 255
            QAEPRLE KKHRRQSRKR+NQSI                +PILRA+KNEN
Sbjct: 454  QAEPRLELKKHRRQSRKRVNQSILDELDELEDEDDLEETNPILRAMKNEN 503


>ref|XP_002514929.1| GTP binding protein, putative [Ricinus communis]
            gi|223545980|gb|EEF47483.1| GTP binding protein, putative
            [Ricinus communis]
          Length = 500

 Score =  667 bits (1722), Expect = 0.0
 Identities = 347/471 (73%), Positives = 393/471 (83%), Gaps = 21/471 (4%)
 Frame = -3

Query: 1604 RCLPISAARQQ-------NPKQLS-----PNKNFLKAKHTL-KDFSSLAPILSHEDSPPL 1464
            R LPI+ ++QQ       NP  +S     PNK  LKA+ TL K++SSL+PILS +  P L
Sbjct: 30   RHLPITVSKQQQQQQQQKNPNNISRKPQQPNKYILKARQTLVKEYSSLSPILSPDTKPNL 89

Query: 1463 SESQAVGIVASSQANFMRVIVHSLPEEPSGSF------RESLGGVELLCVVRALLKKIKR 1302
            S+SQAVG VA++QANFMRVI+ SLP   SG+F       +S  GVELLCVVRA+LKKI+R
Sbjct: 90   SDSQAVGTVAAAQANFMRVIIQSLPPS-SGTFLKSPEEEDSRIGVELLCVVRAVLKKIRR 148

Query: 1301 RVMVGDKVLVGSIDWVDRRGMIENVFQRNSEILDPPVANVDHLLVLFSLEQPRLEPFTLT 1122
            RV+VGDKV+VGSIDWVDRRGMIENVFQR++EILDPPVANVDHLLVLFS++QP++EPF LT
Sbjct: 149  RVLVGDKVVVGSIDWVDRRGMIENVFQRSTEILDPPVANVDHLLVLFSMDQPKIEPFALT 208

Query: 1121 RFLVEAESTGIPLTLALNKTELVDNETAGSWKARLRDWGYEPIFCSVESGHNLDLLAFKL 942
            RFLVEAESTGIPLTLALNK+ELVD ET  +WK+RLR WGYEP+FCSVES   LD LA+ L
Sbjct: 209  RFLVEAESTGIPLTLALNKSELVDEETLIAWKSRLRSWGYEPLFCSVESKLGLDSLAYIL 268

Query: 941  RDQTTVIVGPSGVGKSSLINALRGNLRVCDAAEGENWFEPILGSKWFEDQRVGEVSTRSG 762
            R+QTTVIVGPSGVGKSSLINALR   R CD AE +NWF+P+LGSKWFE+QRVGEVSTRSG
Sbjct: 269  REQTTVIVGPSGVGKSSLINALRNKPRACDVAENDNWFDPMLGSKWFEEQRVGEVSTRSG 328

Query: 761  RGKHTTRHVTLLPLSGGGYLADTPGFNQPSLLKVTKQSLAQTFPEIRKMLSANESAKCSF 582
            RGKHTTR+V+LLPLS GGYLADTPGFNQPSLLKVTKQSLA+TFPEI+KMLS+   AKCSF
Sbjct: 329  RGKHTTRNVSLLPLSAGGYLADTPGFNQPSLLKVTKQSLAETFPEIQKMLSSGGPAKCSF 388

Query: 581  NNCLHLGEPGCIVKGDWERYSFYFQLLDEIKIREEFQLRTFGTKREGDVRLKIGDMGVQQ 402
            N+CLHLGEPGCIV GDWERYSFYFQLLDEI+IREEFQLRT+GTK+EGDVR K+GDMGVQQ
Sbjct: 389  NDCLHLGEPGCIVNGDWERYSFYFQLLDEIRIREEFQLRTYGTKKEGDVRYKVGDMGVQQ 448

Query: 401  AEPRLEPKKHRRQSRKRINQSI--XXXXXXXXXXXXXXXXDPILRALKNEN 255
            AEPRLEPKKHRRQSRKRINQS+                  DPILRALKNEN
Sbjct: 449  AEPRLEPKKHRRQSRKRINQSLLDELDELDDDDNLLDEENDPILRALKNEN 499


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