BLASTX nr result

ID: Glycyrrhiza23_contig00014527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014527
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532529.1| PREDICTED: probable ATP-dependent RNA helica...   398   e-109
ref|XP_003631052.1| ATP-dependent RNA helicase A-like protein [M...   397   e-109
ref|XP_003524350.1| PREDICTED: probable ATP-dependent RNA helica...   391   e-107
ref|XP_002520424.1| ATP-dependent RNA helicase, putative [Ricinu...   379   e-103
ref|XP_002321501.1| predicted protein [Populus trichocarpa] gi|2...   374   e-101

>ref|XP_003532529.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
            max]
          Length = 1177

 Score =  398 bits (1023), Expect = e-109
 Identities = 198/234 (84%), Positives = 208/234 (88%)
 Frame = +3

Query: 3    LCNIICTQPRRISAISVSERVAAERGEKLGESVGYKVRLEGIKGRDTRLLFCTTGXXXXX 182
            +CNIICTQPRRISA+SVSERVAAERGEKLGESVGYKVRLEG+KGRDTRLLFCTTG     
Sbjct: 328  VCNIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGVLLRR 387

Query: 183  XXXDRSLKGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYF 362
               DR+LKGVTHVIVDEIHERGMNEDFLLIV               MSATLNAELFSSYF
Sbjct: 388  LLVDRNLKGVTHVIVDEIHERGMNEDFLLIVLKELLPHRPDLRLILMSATLNAELFSSYF 447

Query: 363  DGAPTMHIPGFTFPVRAHFLEDILERTGYRLTPYNQIDDYGQEKTWKMQKQAQAFKKRKT 542
            +GAPTMHIPGFTFPVRAHFLEDILERTGYRLTP NQIDDYGQEKTWKMQKQAQAF+KRK+
Sbjct: 448  NGAPTMHIPGFTFPVRAHFLEDILERTGYRLTPSNQIDDYGQEKTWKMQKQAQAFRKRKS 507

Query: 543  QIASAVEDALELADFKGYSLHTRESLSSWCPDSIGFNLIEHVLCHIVKNERPGA 704
            QIASAVEDALE+A+FKGYSL TR+SLS WCPDSIGFNLIEHVLCHIVKNERPGA
Sbjct: 508  QIASAVEDALEVAEFKGYSLRTRDSLSCWCPDSIGFNLIEHVLCHIVKNERPGA 561


>ref|XP_003631052.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula]
            gi|355525074|gb|AET05528.1| ATP-dependent RNA helicase
            A-like protein [Medicago truncatula]
          Length = 1214

 Score =  397 bits (1021), Expect = e-109
 Identities = 199/234 (85%), Positives = 207/234 (88%)
 Frame = +3

Query: 3    LCNIICTQPRRISAISVSERVAAERGEKLGESVGYKVRLEGIKGRDTRLLFCTTGXXXXX 182
            LCNIICTQPRRISAISVSERVAAERGEKLGESVGYKVRLEG++GRDTRLLFCTTG     
Sbjct: 364  LCNIICTQPRRISAISVSERVAAERGEKLGESVGYKVRLEGMRGRDTRLLFCTTGVLLRR 423

Query: 183  XXXDRSLKGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYF 362
               DRSLKGVTHVIVDEIHERGMNEDFLLIV               MSATLNAELFSSYF
Sbjct: 424  LLVDRSLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPDLRLILMSATLNAELFSSYF 483

Query: 363  DGAPTMHIPGFTFPVRAHFLEDILERTGYRLTPYNQIDDYGQEKTWKMQKQAQAFKKRKT 542
            DGAPT+HIPGFTFPVRA FLEDILERTGYRLTPYNQIDDYGQEKTWKMQKQAQ+FKKRK+
Sbjct: 484  DGAPTIHIPGFTFPVRAQFLEDILERTGYRLTPYNQIDDYGQEKTWKMQKQAQSFKKRKS 543

Query: 543  QIASAVEDALELADFKGYSLHTRESLSSWCPDSIGFNLIEHVLCHIVKNERPGA 704
            QIASAVEDALE+ADFKGYSL T+ES+S W PDSIGFNLIEHVLCHIVKNERPGA
Sbjct: 544  QIASAVEDALEVADFKGYSLRTKESMSCWNPDSIGFNLIEHVLCHIVKNERPGA 597


>ref|XP_003524350.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
            max]
          Length = 1180

 Score =  391 bits (1004), Expect = e-107
 Identities = 195/234 (83%), Positives = 206/234 (88%)
 Frame = +3

Query: 3    LCNIICTQPRRISAISVSERVAAERGEKLGESVGYKVRLEGIKGRDTRLLFCTTGXXXXX 182
            +CNIICTQPRRISA+SVSERVAAERGEKLGESVGYKVRLEG+KGRDTRLLFCTTG     
Sbjct: 331  VCNIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGVLLRR 390

Query: 183  XXXDRSLKGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYF 362
               DR+LKGVTHVIVDEIHERGMNEDFLLIV               MSATLNAELFSSYF
Sbjct: 391  LLVDRNLKGVTHVIVDEIHERGMNEDFLLIVLKELLHHRPDLRLILMSATLNAELFSSYF 450

Query: 363  DGAPTMHIPGFTFPVRAHFLEDILERTGYRLTPYNQIDDYGQEKTWKMQKQAQAFKKRKT 542
            +GAPTMHIPGFTFPVRAHFLEDILERTGYRLTPYNQIDDYGQEKTWKMQKQAQAF+KRK+
Sbjct: 451  NGAPTMHIPGFTFPVRAHFLEDILERTGYRLTPYNQIDDYGQEKTWKMQKQAQAFRKRKS 510

Query: 543  QIASAVEDALELADFKGYSLHTRESLSSWCPDSIGFNLIEHVLCHIVKNERPGA 704
             IASAVEDALE+A+FKGYSL T++SLS W PDSIGFNLIEHVLCHIVKNER GA
Sbjct: 511  HIASAVEDALEVAEFKGYSLRTQDSLSCWYPDSIGFNLIEHVLCHIVKNERSGA 564


>ref|XP_002520424.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223540409|gb|EEF41979.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1058

 Score =  379 bits (973), Expect = e-103
 Identities = 191/233 (81%), Positives = 201/233 (86%)
 Frame = +3

Query: 6   CNIICTQPRRISAISVSERVAAERGEKLGESVGYKVRLEGIKGRDTRLLFCTTGXXXXXX 185
           C+IICTQPRRISA++VSERVAAERGEKLGESVGYKVRLEGIKGRDTRLLFCTTG      
Sbjct: 249 CSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGIKGRDTRLLFCTTGILLRRL 308

Query: 186 XXDRSLKGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFD 365
             DR+L GVTHVIVDEIHERGMNEDFLLIV               MSATLNAELFSSYF 
Sbjct: 309 LVDRNLNGVTHVIVDEIHERGMNEDFLLIVLRDLLPHRPELRLILMSATLNAELFSSYFG 368

Query: 366 GAPTMHIPGFTFPVRAHFLEDILERTGYRLTPYNQIDDYGQEKTWKMQKQAQAFKKRKTQ 545
           GAPT+HIPGFT+PVRAHFLEDILE TG+RLTPYNQIDDYGQEK WKMQKQAQAF+KRKTQ
Sbjct: 369 GAPTLHIPGFTYPVRAHFLEDILELTGHRLTPYNQIDDYGQEKGWKMQKQAQAFRKRKTQ 428

Query: 546 IASAVEDALELADFKGYSLHTRESLSSWCPDSIGFNLIEHVLCHIVKNERPGA 704
           IASAVEDALE A+FKGYSL T+ESLSSW PDSIGFNLIE VLCHIVK ERPGA
Sbjct: 429 IASAVEDALEAANFKGYSLRTQESLSSWNPDSIGFNLIERVLCHIVKKERPGA 481


>ref|XP_002321501.1| predicted protein [Populus trichocarpa] gi|222868497|gb|EEF05628.1|
           predicted protein [Populus trichocarpa]
          Length = 1062

 Score =  374 bits (959), Expect = e-101
 Identities = 188/233 (80%), Positives = 200/233 (85%)
 Frame = +3

Query: 6   CNIICTQPRRISAISVSERVAAERGEKLGESVGYKVRLEGIKGRDTRLLFCTTGXXXXXX 185
           C+IICTQPRRISA++VSERVAAERGEKLGESVGYKVRLEG++GRDTRLLFCTTG      
Sbjct: 212 CSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMRGRDTRLLFCTTGILLRRL 271

Query: 186 XXDRSLKGVTHVIVDEIHERGMNEDFLLIVXXXXXXXXXXXXXXXMSATLNAELFSSYFD 365
             DR+LKGVTHVIVDEIHERGMNEDFLLIV               MSATLNAELFSSYF 
Sbjct: 272 LLDRNLKGVTHVIVDEIHERGMNEDFLLIVLRDLLPRRPELRLILMSATLNAELFSSYFG 331

Query: 366 GAPTMHIPGFTFPVRAHFLEDILERTGYRLTPYNQIDDYGQEKTWKMQKQAQAFKKRKTQ 545
           GAP +HIPGFT+PVRAHFLE+ILE TGYRLTPYNQIDDYGQEKTWKMQKQAQAFKKRK+Q
Sbjct: 332 GAPAIHIPGFTYPVRAHFLENILEITGYRLTPYNQIDDYGQEKTWKMQKQAQAFKKRKSQ 391

Query: 546 IASAVEDALELADFKGYSLHTRESLSSWCPDSIGFNLIEHVLCHIVKNERPGA 704
           IAS+VEDALE+ADFKG S  T ESLS W PDSIGFNLIEHVLCHIVK ERPGA
Sbjct: 392 IASSVEDALEVADFKGCSSRTWESLSCWNPDSIGFNLIEHVLCHIVKKERPGA 444