BLASTX nr result

ID: Glycyrrhiza23_contig00014454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014454
         (1769 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003596088.1| DEAD-box ATP-dependent RNA helicase [Medicag...   674   0.0  
ref|XP_003532920.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   655   0.0  
ref|XP_003545934.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   652   0.0  
ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   562   e-157
emb|CAN65105.1| hypothetical protein VITISV_021046 [Vitis vinifera]   562   e-157

>ref|XP_003596088.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355485136|gb|AES66339.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 513

 Score =  674 bits (1738), Expect = 0.0
 Identities = 346/454 (76%), Positives = 384/454 (84%)
 Frame = +3

Query: 87   MDENFPLFKPTRXXXXXXXXXXXXXXXILNSHAENAVVSNTNPNSNNAEDTATATFADLG 266
            +D+NFPLFKP+R                +++  +N VV++   NSN   +  TATF+DLG
Sbjct: 8    VDQNFPLFKPSRKPSINPTLP-------ISNKPQNDVVTHETLNSN--PENTTATFSDLG 58

Query: 267  LSEWAVNTCKELGMRTPRRVQRHCIPKVLEGRHVLGIDETGSGKTAAFALPILHRLSVHP 446
            LSEWAV TCKELGM+TPRRVQ+HCIP++L GRHV+GID+TGSGKTAAFALPIL RL+ H 
Sbjct: 59   LSEWAVKTCKELGMKTPRRVQQHCIPQILAGRHVIGIDQTGSGKTAAFALPILQRLAEHT 118

Query: 447  FGVFALVVTPTRELAFQLAEQFRALGSSLRVRIAVVVGGMDMLKQTKELVAMPHLVIATP 626
            FGVFALVVTPTRELAFQLAEQFRALGSSLR+RIAVVVGGMDML+QTKELVA PHLVIATP
Sbjct: 119  FGVFALVVTPTRELAFQLAEQFRALGSSLRLRIAVVVGGMDMLRQTKELVARPHLVIATP 178

Query: 627  GRIKTLLQENPDIPPVFSKTKFLVLDEADRVLDVGFQDELKFIFQCLPENRQNLFFSATT 806
            GRIK LL++NP+I PVF++TKFLVLDEADRVLDVGFQDELKFIFQCLPENRQNLFFSATT
Sbjct: 179  GRIKVLLKDNPEIAPVFARTKFLVLDEADRVLDVGFQDELKFIFQCLPENRQNLFFSATT 238

Query: 807  TNNLQKLIERYQDKLYVYEAYEGFKTVETLNQQVVLIPKNDKDVYLMHFLSKMEDMSIRS 986
            T+NLQKL ERYQDKLY +EAYEGFKTVE L QQVV IPKN KDVYL+H LSKMEDM IRS
Sbjct: 239  TSNLQKLRERYQDKLYAFEAYEGFKTVENLKQQVVFIPKNVKDVYLLHILSKMEDMGIRS 298

Query: 987  AIVFVSTCRDCHRLSLMMEVLDQEAAGLYSFKSQAQRLEALHQFKSGKVSILLATDVASR 1166
            AIVFVSTCRDCHRL+LM+EVLDQEAA LYSF+SQAQRLEALH FKSGKV +LLATDVA R
Sbjct: 299  AIVFVSTCRDCHRLNLMLEVLDQEAAALYSFRSQAQRLEALHDFKSGKVPVLLATDVAGR 358

Query: 1167 GLDIPTVDLVINYDVPRFPRDYIHXXXXXXXXXXXXXXLSIVTQNDIVLIREIEALIGRQ 1346
            GLDIPTVDLVINYDVPRFPRDYIH              LS+VTQND+ LIREIE LI RQ
Sbjct: 359  GLDIPTVDLVINYDVPRFPRDYIHRVGRTARAGRGGLALSLVTQNDVDLIREIETLIERQ 418

Query: 1347 LEMIEYKKGEELPLTRKVFSAKRVAGMRMVDDGF 1448
            LEMIEYK+ E L L +KVFSAK VA M+M+DDGF
Sbjct: 419  LEMIEYKENEVLSLMKKVFSAKNVAKMKMMDDGF 452


>ref|XP_003532920.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Glycine max]
          Length = 587

 Score =  655 bits (1690), Expect = 0.0
 Identities = 341/459 (74%), Positives = 370/459 (80%), Gaps = 6/459 (1%)
 Frame = +3

Query: 90   DENFPLFKPTRXXXXXXXXXXXXXXXILNSHAENAVVSNTNPNSNNAEDTATAT------ 251
            D NFPLFK                     S       SN     +++ +TA         
Sbjct: 9    DPNFPLFKTPSSPAVTTTATHKPL-----STTPITTTSNGERREDHSVETAATVAADAEA 63

Query: 252  FADLGLSEWAVNTCKELGMRTPRRVQRHCIPKVLEGRHVLGIDETGSGKTAAFALPILHR 431
            F DLGL+EWAV TC+ELGMR PR VQR CIP+VLEGRHVLGIDETGSGKTAAFALPILHR
Sbjct: 64   FGDLGLAEWAVKTCRELGMRRPRPVQRRCIPRVLEGRHVLGIDETGSGKTAAFALPILHR 123

Query: 432  LSVHPFGVFALVVTPTRELAFQLAEQFRALGSSLRVRIAVVVGGMDMLKQTKELVAMPHL 611
            L+ HPFGVFALVVTPTRELAFQLAEQFRALGS++ +RI VVVGGMDML+QTKEL A PHL
Sbjct: 124  LAEHPFGVFALVVTPTRELAFQLAEQFRALGSAVHLRITVVVGGMDMLRQTKELAARPHL 183

Query: 612  VIATPGRIKTLLQENPDIPPVFSKTKFLVLDEADRVLDVGFQDELKFIFQCLPENRQNLF 791
            VIATPGRI  LL+ NPDIPPVFS+TKFLVLDEADRVLDVGFQ+EL+FIFQCLPENRQNLF
Sbjct: 184  VIATPGRIHALLRNNPDIPPVFSRTKFLVLDEADRVLDVGFQEELRFIFQCLPENRQNLF 243

Query: 792  FSATTTNNLQKLIERYQDKLYVYEAYEGFKTVETLNQQVVLIPKNDKDVYLMHFLSKMED 971
            FSATTT+NLQKL ERYQDK+YVYEAYEGFKTVETL QQ + IPK  KDVYLMH L+KMED
Sbjct: 244  FSATTTSNLQKLRERYQDKMYVYEAYEGFKTVETLKQQAIFIPKKVKDVYLMHILAKMED 303

Query: 972  MSIRSAIVFVSTCRDCHRLSLMMEVLDQEAAGLYSFKSQAQRLEALHQFKSGKVSILLAT 1151
            M IRSAIVF+STCRDCHRLSLM+EVLDQEAA LYSFKSQAQRLEALHQFKSGKVSILLAT
Sbjct: 304  MGIRSAIVFISTCRDCHRLSLMLEVLDQEAAALYSFKSQAQRLEALHQFKSGKVSILLAT 363

Query: 1152 DVASRGLDIPTVDLVINYDVPRFPRDYIHXXXXXXXXXXXXXXLSIVTQNDIVLIREIEA 1331
            DVASRGLDIPTVDLVINYDVPRFPRDYIH              LS+VTQND+ LI EIEA
Sbjct: 364  DVASRGLDIPTVDLVINYDVPRFPRDYIHRVGRTARAGRGGLALSLVTQNDVDLIHEIEA 423

Query: 1332 LIGRQLEMIEYKKGEELPLTRKVFSAKRVAGMRMVDDGF 1448
            LI +QLEMIEYK+ E L L +KVFSAK VA M+M+DDGF
Sbjct: 424  LIEKQLEMIEYKENEVLSLMKKVFSAKNVAEMKMIDDGF 462


>ref|XP_003545934.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Glycine max]
          Length = 591

 Score =  652 bits (1682), Expect = 0.0
 Identities = 340/469 (72%), Positives = 373/469 (79%), Gaps = 16/469 (3%)
 Frame = +3

Query: 90   DENFPLFKPTRXXXXXXXXXXXXXXXILNSHAENAVVSNTNPNS------NNAEDTATA- 248
            D NFPLFK  R               +  +       +  NP S      ++ ++TAT  
Sbjct: 9    DPNFPLFKTPR--------KTPSSPAVTTTATSKPPSTAANPTSDGERIEDHPDETATVA 60

Query: 249  ---------TFADLGLSEWAVNTCKELGMRTPRRVQRHCIPKVLEGRHVLGIDETGSGKT 401
                     TF DLGL+EWAV TC+ELGMR PR VQR CIP+VLEGRHVLG+DETGSGKT
Sbjct: 61   DTDTDADAETFGDLGLAEWAVKTCRELGMRRPRGVQRRCIPRVLEGRHVLGVDETGSGKT 120

Query: 402  AAFALPILHRLSVHPFGVFALVVTPTRELAFQLAEQFRALGSSLRVRIAVVVGGMDMLKQ 581
            AAFALPILHRL+ HPFGVFALVVTPTRELAFQLAEQFRALGS++ +RI VVVGGMDML+Q
Sbjct: 121  AAFALPILHRLAEHPFGVFALVVTPTRELAFQLAEQFRALGSAVHLRITVVVGGMDMLRQ 180

Query: 582  TKELVAMPHLVIATPGRIKTLLQENPDIPPVFSKTKFLVLDEADRVLDVGFQDELKFIFQ 761
             KEL A PHLVIATPGRI  LL+ NPDIPPVFS+TKFLVLDEADRVLDVGFQ+EL+FIFQ
Sbjct: 181  AKELAARPHLVIATPGRIHALLRNNPDIPPVFSRTKFLVLDEADRVLDVGFQEELRFIFQ 240

Query: 762  CLPENRQNLFFSATTTNNLQKLIERYQDKLYVYEAYEGFKTVETLNQQVVLIPKNDKDVY 941
            CLPENRQNLFFSATTT+NLQKL  RYQDK+YVYEAYEGFKTVETL QQ + IPK  KDVY
Sbjct: 241  CLPENRQNLFFSATTTSNLQKLRGRYQDKMYVYEAYEGFKTVETLKQQAIFIPKKVKDVY 300

Query: 942  LMHFLSKMEDMSIRSAIVFVSTCRDCHRLSLMMEVLDQEAAGLYSFKSQAQRLEALHQFK 1121
            LMH L KMEDM IRSAIVF+STCRDCHRLSLM+EVLDQEAA LYSFKSQAQRLEALHQFK
Sbjct: 301  LMHILDKMEDMGIRSAIVFISTCRDCHRLSLMLEVLDQEAAALYSFKSQAQRLEALHQFK 360

Query: 1122 SGKVSILLATDVASRGLDIPTVDLVINYDVPRFPRDYIHXXXXXXXXXXXXXXLSIVTQN 1301
            SGKVSILLATDVASRGLDIPTVDLVINYDVPRFPRDYIH              LS+VTQN
Sbjct: 361  SGKVSILLATDVASRGLDIPTVDLVINYDVPRFPRDYIHRVGRTARAGRGGLALSLVTQN 420

Query: 1302 DIVLIREIEALIGRQLEMIEYKKGEELPLTRKVFSAKRVAGMRMVDDGF 1448
            D+ LI EIEALI +QLEMIEYK+ + L L +KVFSAK VA M+M+DDGF
Sbjct: 421  DVDLIHEIEALIEKQLEMIEYKENDALSLMKKVFSAKNVAEMKMIDDGF 469


>ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Vitis
            vinifera] gi|297736137|emb|CBI24175.3| unnamed protein
            product [Vitis vinifera]
          Length = 489

 Score =  562 bits (1448), Expect = e-157
 Identities = 288/457 (63%), Positives = 347/457 (75%), Gaps = 3/457 (0%)
 Frame = +3

Query: 87   MDENFPLF---KPTRXXXXXXXXXXXXXXXILNSHAENAVVSNTNPNSNNAEDTATATFA 257
            +DENFPLF   KPT                  N + E  +   TNP S       ++TFA
Sbjct: 7    VDENFPLFSKRKPTPKPSKNSTTTAQ------NPNPEQPLTRTTNPTS------PSSTFA 54

Query: 258  DLGLSEWAVNTCKELGMRTPRRVQRHCIPKVLEGRHVLGIDETGSGKTAAFALPILHRLS 437
            DLGL+EWAV  CKELGMR P  VQ HCIP++L G  VLG+ +TGSGKTAAFALPILHRL+
Sbjct: 55   DLGLAEWAVQACKELGMRRPTPVQHHCIPRILAGDDVLGLAQTGSGKTAAFALPILHRLA 114

Query: 438  VHPFGVFALVVTPTRELAFQLAEQFRALGSSLRVRIAVVVGGMDMLKQTKELVAMPHLVI 617
              PFGVFALVVTPTRELA+QLAEQFRALGS L +R AVVVGGMDM+ Q + L+  PH+VI
Sbjct: 115  EDPFGVFALVVTPTRELAYQLAEQFRALGSCLHLRCAVVVGGMDMINQAQTLMQRPHVVI 174

Query: 618  ATPGRIKTLLQENPDIPPVFSKTKFLVLDEADRVLDVGFQDELKFIFQCLPENRQNLFFS 797
            ATPGR+K LL++NPDIP VF++TKFLVLDEADRVLDVGF++EL+ +FQCLP+NRQ L FS
Sbjct: 175  ATPGRVKVLLEQNPDIPAVFARTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFS 234

Query: 798  ATTTNNLQKLIERYQDKLYVYEAYEGFKTVETLNQQVVLIPKNDKDVYLMHFLSKMEDMS 977
            AT T++LQ L+E   +K Y YEAYEGFKTVE+L QQ + +PKN KDVYL+H LSKME+M 
Sbjct: 235  ATMTSDLQTLLELSSNKAYFYEAYEGFKTVESLKQQYIFVPKNVKDVYLLHILSKMEEMG 294

Query: 978  IRSAIVFVSTCRDCHRLSLMMEVLDQEAAGLYSFKSQAQRLEALHQFKSGKVSILLATDV 1157
            IRSAI+FVSTCR CH LSL++E LD E A L+SFKSQ+ RL A+H+FKSG+V ILLATDV
Sbjct: 295  IRSAIIFVSTCRSCHLLSLLLEELDLEVAALHSFKSQSLRLAAVHRFKSGQVPILLATDV 354

Query: 1158 ASRGLDIPTVDLVINYDVPRFPRDYIHXXXXXXXXXXXXXXLSIVTQNDIVLIREIEALI 1337
            ASRGLDIPTVDLV+NYD+PR+PRDY+H              LSIVTQND+ LI EIEA++
Sbjct: 355  ASRGLDIPTVDLVVNYDIPRYPRDYVHRVGRTARAGRGGLSLSIVTQNDVDLIHEIEAVL 414

Query: 1338 GRQLEMIEYKKGEELPLTRKVFSAKRVAGMRMVDDGF 1448
            G+QL+  + K+ E L    KV+ A+RVA M+M+DDGF
Sbjct: 415  GKQLDKFDCKEKEVLDNITKVYKARRVATMKMMDDGF 451


>emb|CAN65105.1| hypothetical protein VITISV_021046 [Vitis vinifera]
          Length = 592

 Score =  562 bits (1448), Expect = e-157
 Identities = 288/457 (63%), Positives = 347/457 (75%), Gaps = 3/457 (0%)
 Frame = +3

Query: 87   MDENFPLF---KPTRXXXXXXXXXXXXXXXILNSHAENAVVSNTNPNSNNAEDTATATFA 257
            +DENFPLF   KPT                  N + E  +   TNP S       ++TFA
Sbjct: 110  VDENFPLFSKRKPTPKPSKNSTTTAQ------NPNPEQPLTRTTNPTS------PSSTFA 157

Query: 258  DLGLSEWAVNTCKELGMRTPRRVQRHCIPKVLEGRHVLGIDETGSGKTAAFALPILHRLS 437
            DLGL+EWAV  CKELGMR P  VQ HCIP++L G  VLG+ +TGSGKTAAFALPILHRL+
Sbjct: 158  DLGLAEWAVQACKELGMRRPTPVQHHCIPRILAGDDVLGLAQTGSGKTAAFALPILHRLA 217

Query: 438  VHPFGVFALVVTPTRELAFQLAEQFRALGSSLRVRIAVVVGGMDMLKQTKELVAMPHLVI 617
              PFGVFALVVTPTRELA+QLAEQFRALGS L +R AVVVGGMDM+ Q + L+  PH+VI
Sbjct: 218  EDPFGVFALVVTPTRELAYQLAEQFRALGSCLHLRCAVVVGGMDMINQAQTLMQRPHVVI 277

Query: 618  ATPGRIKTLLQENPDIPPVFSKTKFLVLDEADRVLDVGFQDELKFIFQCLPENRQNLFFS 797
            ATPGR+K LL++NPDIP VF++TKFLVLDEADRVLDVGF++EL+ +FQCLP+NRQ L FS
Sbjct: 278  ATPGRVKVLLEQNPDIPAVFARTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFS 337

Query: 798  ATTTNNLQKLIERYQDKLYVYEAYEGFKTVETLNQQVVLIPKNDKDVYLMHFLSKMEDMS 977
            AT T++LQ L+E   +K Y YEAYEGFKTVE+L QQ + +PKN KDVYL+H LSKME+M 
Sbjct: 338  ATMTSDLQTLLELSSNKAYFYEAYEGFKTVESLKQQYIFVPKNVKDVYLLHILSKMEEMG 397

Query: 978  IRSAIVFVSTCRDCHRLSLMMEVLDQEAAGLYSFKSQAQRLEALHQFKSGKVSILLATDV 1157
            IRSAI+FVSTCR CH LSL++E LD E A L+SFKSQ+ RL A+H+FKSG+V ILLATDV
Sbjct: 398  IRSAIIFVSTCRSCHLLSLLLEELDLEVAALHSFKSQSLRLAAVHRFKSGQVPILLATDV 457

Query: 1158 ASRGLDIPTVDLVINYDVPRFPRDYIHXXXXXXXXXXXXXXLSIVTQNDIVLIREIEALI 1337
            ASRGLDIPTVDLV+NYD+PR+PRDY+H              LSIVTQND+ LI EIEA++
Sbjct: 458  ASRGLDIPTVDLVVNYDIPRYPRDYVHRVGRTARAGRGGLSLSIVTQNDVDLIHEIEAVL 517

Query: 1338 GRQLEMIEYKKGEELPLTRKVFSAKRVAGMRMVDDGF 1448
            G+QL+  + K+ E L    KV+ A+RVA M+M+DDGF
Sbjct: 518  GKQLDKFDCKEKEVLDNITKVYKARRVATMKMMDDGF 554


Top