BLASTX nr result

ID: Glycyrrhiza23_contig00014447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014447
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594135.1| F-box protein [Medicago truncatula] gi|35548...   100   2e-19
gb|ABN09744.1| Cyclin-like F-box; F-box protein interaction doma...   100   2e-19
ref|XP_003628685.1| F-box protein [Medicago truncatula] gi|35552...    97   2e-18
ref|XP_003626922.1| F-box protein [Medicago truncatula] gi|35552...    96   2e-18
ref|XP_003605337.1| F-box protein [Medicago truncatula] gi|35550...    92   6e-17

>ref|XP_003594135.1| F-box protein [Medicago truncatula] gi|355483183|gb|AES64386.1|
           F-box protein [Medicago truncatula]
          Length = 460

 Score =  100 bits (248), Expect = 2e-19
 Identities = 50/98 (51%), Positives = 69/98 (70%), Gaps = 5/98 (5%)
 Frame = -2

Query: 279 PIWEIYSVRNNSWRKLDVNIPM---PHSRSGVCLRVHMDGMCHWWEEGEGVPHKDGEYLV 109
           P+WEIYS+R+NSW+KLDV++ M   P +R    +R +MDGMCHWW++ E        Y V
Sbjct: 225 PLWEIYSLRSNSWKKLDVDMSMVMSPETREET-VRFYMDGMCHWWDKIEKDSDDGETYFV 283

Query: 108 SFDLGNEAFFITPRPSDMDDSFE--WLQRRLVVLNGSI 1
           SFD+ NE  F TP PSD+DD+F+   ++R+LV+LN SI
Sbjct: 284 SFDVTNEVCFTTPMPSDIDDTFDIRLVKRQLVMLNRSI 321


>gb|ABN09744.1| Cyclin-like F-box; F-box protein interaction domain [Medicago
           truncatula]
          Length = 438

 Score =  100 bits (248), Expect = 2e-19
 Identities = 50/98 (51%), Positives = 69/98 (70%), Gaps = 5/98 (5%)
 Frame = -2

Query: 279 PIWEIYSVRNNSWRKLDVNIPM---PHSRSGVCLRVHMDGMCHWWEEGEGVPHKDGEYLV 109
           P+WEIYS+R+NSW+KLDV++ M   P +R    +R +MDGMCHWW++ E        Y V
Sbjct: 225 PLWEIYSLRSNSWKKLDVDMSMVMSPETREET-VRFYMDGMCHWWDKIEKDSDDGETYFV 283

Query: 108 SFDLGNEAFFITPRPSDMDDSFE--WLQRRLVVLNGSI 1
           SFD+ NE  F TP PSD+DD+F+   ++R+LV+LN SI
Sbjct: 284 SFDVTNEVCFTTPMPSDIDDTFDIRLVKRQLVMLNRSI 321


>ref|XP_003628685.1| F-box protein [Medicago truncatula] gi|355522707|gb|AET03161.1|
           F-box protein [Medicago truncatula]
          Length = 384

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/92 (51%), Positives = 64/92 (69%)
 Frame = -2

Query: 276 IWEIYSVRNNSWRKLDVNIPMPHSRSGVCLRVHMDGMCHWWEEGEGVPHKDGEYLVSFDL 97
           +WE+YS+R+ SWRKL+V++ +P +R      V+MDG+CHWW    G  + DG  LVSF+L
Sbjct: 201 VWEMYSLRSESWRKLNVDM-LPCNRRNAGAEVYMDGVCHWW----GYAY-DGPCLVSFNL 254

Query: 96  GNEAFFITPRPSDMDDSFEWLQRRLVVLNGSI 1
            +E    TP P DMD+SFEW++R L VLN SI
Sbjct: 255 SSEVILTTPIPLDMDESFEWMERHLAVLNMSI 286


>ref|XP_003626922.1| F-box protein [Medicago truncatula] gi|355520944|gb|AET01398.1|
           F-box protein [Medicago truncatula]
          Length = 415

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 50/95 (52%), Positives = 67/95 (70%), Gaps = 3/95 (3%)
 Frame = -2

Query: 276 IWEIYSVRNNSWRKLDVNIPMPHSRSGVCLRVHMDGMCHWWEEGEGVPHKDGEYLVSFDL 97
           +WEIYS++ NSWRK+D+++P  ++ SGV ++V+MDG+CHWW E + V      YLVSF+L
Sbjct: 194 LWEIYSLKRNSWRKVDIDMPTQYN-SGVGVQVYMDGVCHWWSESDEV------YLVSFEL 246

Query: 96  GNEAFFITPRPSDMDDS---FEWLQRRLVVLNGSI 1
            NE F  TP PS+MDD+      L R L VLNGSI
Sbjct: 247 INEVFVKTPIPSNMDDNDIDSRILFRHLNVLNGSI 281


>ref|XP_003605337.1| F-box protein [Medicago truncatula] gi|355506392|gb|AES87534.1|
           F-box protein [Medicago truncatula]
          Length = 400

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 50/95 (52%), Positives = 66/95 (69%), Gaps = 2/95 (2%)
 Frame = -2

Query: 279 PIWEIYSVRNNSWRKLDVNIPMPHSRSGVC-LRVHMDGMCHW-WEEGEGVPHKDGEYLVS 106
           PIW  YS+R NSW+++ +   MP+S + +   +V+MDG+CHW WEE E    +DG +LVS
Sbjct: 210 PIWVKYSLRTNSWKRILI-FDMPYSLALIDGSQVYMDGVCHWLWEEDED--SQDGRWLVS 266

Query: 105 FDLGNEAFFITPRPSDMDDSFEWLQRRLVVLNGSI 1
           F L NE FFITP PS +DD F+ L   LVVLNGS+
Sbjct: 267 FYLSNEVFFITPIPSYLDDCFKALWINLVVLNGSV 301


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