BLASTX nr result

ID: Glycyrrhiza23_contig00014445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014445
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588455.1| F-box protein [Medicago truncatula] gi|35547...    72   4e-11
ref|XP_003628685.1| F-box protein [Medicago truncatula] gi|35552...    72   5e-11
ref|XP_003613483.1| F-box/kelch-repeat protein [Medicago truncat...    70   2e-10
ref|XP_003621561.1| F-box protein [Medicago truncatula] gi|87241...    70   2e-10
ref|XP_003621564.1| F-box protein [Medicago truncatula] gi|12436...    70   2e-10

>ref|XP_003588455.1| F-box protein [Medicago truncatula] gi|355477503|gb|AES58706.1|
           F-box protein [Medicago truncatula]
          Length = 327

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 39/64 (60%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
 Frame = +3

Query: 24  DNRDHATLYSLSGERFENKVKLDWPPPFQEDDIDRDIFILGS-VNGTLCLSSVTSEEKRV 200
           D  +H+ LY   GERF+NK  LDWPPPFQ D  DRDI ILGS +NGTLCL  V +   +V
Sbjct: 60  DFENHSFLYLFPGERFDNKDMLDWPPPFQND--DRDINILGSGINGTLCL-YVNNISSKV 116

Query: 201 VLWN 212
           VLWN
Sbjct: 117 VLWN 120


>ref|XP_003628685.1| F-box protein [Medicago truncatula] gi|355522707|gb|AET03161.1|
           F-box protein [Medicago truncatula]
          Length = 384

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 38/60 (63%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
 Frame = +3

Query: 36  HATLYSLSGERFENKVKLDWPPPFQEDDIDRDIFILGS-VNGTLCLSSVTSEEKRVVLWN 212
           H  LY LSGE FENKV L+WPPPFQ DDID D  ILGS +NGTLCL       + +VLWN
Sbjct: 81  HCALYLLSGENFENKVILNWPPPFQADDIDMD--ILGSGINGTLCLHRY---HRTIVLWN 135


>ref|XP_003613483.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355514818|gb|AES96441.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 251

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/56 (58%), Positives = 39/56 (69%)
 Frame = +3

Query: 45  LYSLSGERFENKVKLDWPPPFQEDDIDRDIFILGSVNGTLCLSSVTSEEKRVVLWN 212
           LYSL GER +NK KLDWP PF+E D + D+   GS+NG LCL S +    RVVLWN
Sbjct: 89  LYSLFGERCQNKTKLDWPNPFEEADPEFDMVGSGSINGILCLVSKSQPNNRVVLWN 144


>ref|XP_003621561.1| F-box protein [Medicago truncatula] gi|87241468|gb|ABD33326.1|
           Cyclin-like F-box; F-box protein interaction domain
           [Medicago truncatula] gi|124361053|gb|ABN09025.1|
           Cyclin-like F-box; F-box protein interaction domain
           [Medicago truncatula] gi|355496576|gb|AES77779.1| F-box
           protein [Medicago truncatula]
          Length = 398

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/56 (57%), Positives = 39/56 (69%)
 Frame = +3

Query: 45  LYSLSGERFENKVKLDWPPPFQEDDIDRDIFILGSVNGTLCLSSVTSEEKRVVLWN 212
           LYSLSGER++NK KLDWP  F+E D + D+   GS+NG LCL S +    RVV WN
Sbjct: 91  LYSLSGERYQNKTKLDWPNLFEEADPEFDVVGSGSINGILCLVSKSQPNNRVVFWN 146


>ref|XP_003621564.1| F-box protein [Medicago truncatula] gi|124361057|gb|ABN09029.1|
           Cyclin-like F-box; F-box protein interaction domain
           [Medicago truncatula] gi|355496579|gb|AES77782.1| F-box
           protein [Medicago truncatula]
          Length = 410

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/56 (57%), Positives = 39/56 (69%)
 Frame = +3

Query: 45  LYSLSGERFENKVKLDWPPPFQEDDIDRDIFILGSVNGTLCLSSVTSEEKRVVLWN 212
           LYSLSGER++NK KLDWP  F+E D + D+   GS+NG LCL S +    RVV WN
Sbjct: 91  LYSLSGERYQNKTKLDWPNLFEEADPEFDVVGSGSINGILCLVSKSQPNNRVVFWN 146


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