BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014381
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540714.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-specifi...   120   1e-25
ref|XP_003539065.1| PREDICTED: tRNA-specific 2-thiouridylase mnm...   108   3e-22
ref|XP_002894309.1| tRNA (5-methylaminomethyl-2-thiouridylate)-m...    83   3e-14
ref|NP_175542.2| tRNA (5-methylaminomethyl-2-thiouridylate)-meth...    80   2e-13
dbj|BAD95081.1| hypothetical protein [Arabidopsis thaliana]            80   2e-13

>ref|XP_003540714.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-specific 2-thiouridylase
           mnmA-like [Glycine max]
          Length = 467

 Score =  120 bits (300), Expect = 1e-25
 Identities = 72/108 (66%), Positives = 78/108 (72%), Gaps = 7/108 (6%)
 Frame = +3

Query: 66  MSRVAVRWNW--RPLSSLPPAHFAPQKLHKLNPTPPRFPTLKKLFC----SAVAQTSPSL 227
           M +VAV WNW  RP++S P   F  Q LH LNP P R  + K LFC    SAVAQ SP L
Sbjct: 1   MWKVAVPWNWIWRPMASPPLTAFTCQNLHTLNPRP-RCRSFK-LFCRPSFSAVAQPSPPL 58

Query: 228 NVDPDTYLRCSMP-HKPLRVAVLVSGGVDSSVALRLLHAAGHSCIAFY 368
           + D D YLRCSMP + PLRVAVLVSGGVDSSVALRLLHAAGHSC AFY
Sbjct: 59  SGDLDRYLRCSMPQNSPLRVAVLVSGGVDSSVALRLLHAAGHSCTAFY 106


>ref|XP_003539065.1| PREDICTED: tRNA-specific 2-thiouridylase mnmA-like [Glycine max]
          Length = 488

 Score =  108 bits (271), Expect = 3e-22
 Identities = 65/94 (69%), Positives = 69/94 (73%), Gaps = 5/94 (5%)
 Frame = +3

Query: 102 LSSLPPAHFAPQKLHKLNPTPPRFPTLKKLFC----SAVAQTSPSLNVDPDTYLRCSMP- 266
           ++SLP   F  Q LH LNP P R  T K LFC    SAVA TSP L+ D D YLRCSMP 
Sbjct: 1   MASLPLTPFTCQNLHTLNPRP-RCRTFK-LFCRPSSSAVAHTSPPLSGDLDRYLRCSMPQ 58

Query: 267 HKPLRVAVLVSGGVDSSVALRLLHAAGHSCIAFY 368
           + PLRVAVLVSGGVDSSVALRLLHAAGHSC AFY
Sbjct: 59  NSPLRVAVLVSGGVDSSVALRLLHAAGHSCTAFY 92


>ref|XP_002894309.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Arabidopsis lyrata subsp. lyrata]
           gi|297340151|gb|EFH70568.1| tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Arabidopsis lyrata subsp. lyrata]
          Length = 500

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 50/98 (51%), Positives = 60/98 (61%), Gaps = 8/98 (8%)
 Frame = +3

Query: 99  PLSSLP------PAHFA--PQKLHKLNPTPPRFPTLKKLFCSAVAQTSPSLNVDPDTYLR 254
           PLSS+       P+ F+  P     L P+P     +  L  S +  +  +  +D   YL 
Sbjct: 20  PLSSISISFRVFPSFFSSSPSSSSSLLPSPQSSDPITPLLSSGLNYSRHAFLLDQ--YLS 77

Query: 255 CSMPHKPLRVAVLVSGGVDSSVALRLLHAAGHSCIAFY 368
           CSMP KPLRVAVL+SGGVDSSVALRLLHAAGHSC AFY
Sbjct: 78  CSMPEKPLRVAVLLSGGVDSSVALRLLHAAGHSCTAFY 115


>ref|NP_175542.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Arabidopsis thaliana] gi|332194528|gb|AEE32649.1| tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Arabidopsis thaliana]
          Length = 497

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 38/43 (88%), Positives = 39/43 (90%)
 Frame = +3

Query: 240 DTYLRCSMPHKPLRVAVLVSGGVDSSVALRLLHAAGHSCIAFY 368
           D YL CSMP KPLRVAVL+SGGVDSSVALRLLHAAGHSC AFY
Sbjct: 70  DQYLSCSMPEKPLRVAVLLSGGVDSSVALRLLHAAGHSCTAFY 112


>dbj|BAD95081.1| hypothetical protein [Arabidopsis thaliana]
          Length = 497

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 38/43 (88%), Positives = 39/43 (90%)
 Frame = +3

Query: 240 DTYLRCSMPHKPLRVAVLVSGGVDSSVALRLLHAAGHSCIAFY 368
           D YL CSMP KPLRVAVL+SGGVDSSVALRLLHAAGHSC AFY
Sbjct: 70  DQYLSCSMPEKPLRVAVLLSGGVDSSVALRLLHAAGHSCTAFY 112