BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014324
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531932.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   168   5e-40
ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/m...   155   3e-36
ref|XP_002311418.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35
ref|XP_003628713.1| DNA-directed RNA polymerase [Medicago trunca...   152   4e-35
ref|XP_003628715.1| DNA-directed RNA polymerase [Medicago trunca...   152   4e-35

>ref|XP_003531932.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
           [Glycine max]
          Length = 949

 Score =  168 bits (425), Expect = 5e-40
 Identities = 77/105 (73%), Positives = 90/105 (85%)
 Frame = +1

Query: 1   KIRKKVSSLTKKQKMQQAMGVIRGLDDWKPWGREAQAKVGCRLMQLLTETAYIQPPVNQL 180
           ++RK+V++L KKQK  QAMG++RG DDWK WG+EAQ KVG RLMQLL ETAYIQPP N +
Sbjct: 265 RLRKRVAALMKKQKKLQAMGIVRGQDDWKAWGQEAQVKVGSRLMQLLIETAYIQPPANLI 324

Query: 181 GGGPPDIRPAFKHTFKTAATDSQKENRRYGVIECDPLVQKGLEKT 315
           G GPPDIRPAFKHT KT +++SQKE RRYGVIECDPLVQ GLEK+
Sbjct: 325 GDGPPDIRPAFKHTLKTLSSESQKETRRYGVIECDPLVQNGLEKS 369


>ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/mitochondrial precursor,
           putative [Ricinus communis] gi|223546175|gb|EEF47677.1|
           DNA-directed RNA polymerase 2, chloroplast/mitochondrial
           precursor, putative [Ricinus communis]
          Length = 997

 Score =  155 bits (392), Expect = 3e-36
 Identities = 73/105 (69%), Positives = 85/105 (80%)
 Frame = +1

Query: 1   KIRKKVSSLTKKQKMQQAMGVIRGLDDWKPWGREAQAKVGCRLMQLLTETAYIQPPVNQL 180
           K+RKKV+ L KKQK+QQ  G+ +G DD  PWG+EAQ KVGCRL+QLL ETAYIQPPVNQL
Sbjct: 313 KLRKKVTELMKKQKVQQVRGLTKGHDDSMPWGQEAQVKVGCRLIQLLIETAYIQPPVNQL 372

Query: 181 GGGPPDIRPAFKHTFKTAATDSQKENRRYGVIECDPLVQKGLEKT 315
           G G PDIRPAF HT K    D+QK +RRYGVIECDP+V+ GLEK+
Sbjct: 373 GDGLPDIRPAFMHTLKNVMKDTQKTSRRYGVIECDPIVRNGLEKS 417


>ref|XP_002311418.1| predicted protein [Populus trichocarpa] gi|222851238|gb|EEE88785.1|
           predicted protein [Populus trichocarpa]
          Length = 877

 Score =  153 bits (386), Expect = 2e-35
 Identities = 69/105 (65%), Positives = 87/105 (82%)
 Frame = +1

Query: 1   KIRKKVSSLTKKQKMQQAMGVIRGLDDWKPWGREAQAKVGCRLMQLLTETAYIQPPVNQL 180
           K+RKKV++L KKQK+QQ   +++G DD +PWG+E   KVG RL+QL+ ETAYIQPP++Q+
Sbjct: 193 KLRKKVTTLIKKQKVQQVRRIVKGHDDSRPWGQEEHVKVGSRLIQLMIETAYIQPPIDQI 252

Query: 181 GGGPPDIRPAFKHTFKTAATDSQKENRRYGVIECDPLVQKGLEKT 315
           G GPPDIRPAF HT KT   D+QK +RRYGVIECDPLV+KGLEK+
Sbjct: 253 GDGPPDIRPAFVHTLKTITKDTQKSSRRYGVIECDPLVRKGLEKS 297


>ref|XP_003628713.1| DNA-directed RNA polymerase [Medicago truncatula]
           gi|355522735|gb|AET03189.1| DNA-directed RNA polymerase
           [Medicago truncatula]
          Length = 727

 Score =  152 bits (383), Expect = 4e-35
 Identities = 69/105 (65%), Positives = 85/105 (80%)
 Frame = +1

Query: 1   KIRKKVSSLTKKQKMQQAMGVIRGLDDWKPWGREAQAKVGCRLMQLLTETAYIQPPVNQL 180
           ++R KV+SL KKQK QQA+G+++G D  KPWG+EAQ KVG RL+QLL ETAY++PP N+ 
Sbjct: 42  RLRNKVASLIKKQKKQQALGIVKGRDQAKPWGQEAQVKVGSRLIQLLIETAYLEPPANKF 101

Query: 181 GGGPPDIRPAFKHTFKTAATDSQKENRRYGVIECDPLVQKGLEKT 315
           G G PDI PAFKHT KT + DS   +RRYGVIECDP++QKGLEKT
Sbjct: 102 GDGGPDIFPAFKHTLKTISNDSNNGSRRYGVIECDPMIQKGLEKT 146


>ref|XP_003628715.1| DNA-directed RNA polymerase [Medicago truncatula]
           gi|355522737|gb|AET03191.1| DNA-directed RNA polymerase
           [Medicago truncatula]
          Length = 251

 Score =  152 bits (383), Expect = 4e-35
 Identities = 69/105 (65%), Positives = 85/105 (80%)
 Frame = +1

Query: 1   KIRKKVSSLTKKQKMQQAMGVIRGLDDWKPWGREAQAKVGCRLMQLLTETAYIQPPVNQL 180
           ++R KV+SL KKQK QQA+G+++G D  KPWG+EAQ KVG RL+QLL ETAY++PP N+ 
Sbjct: 42  RLRNKVASLIKKQKKQQALGIVKGRDQAKPWGQEAQVKVGSRLIQLLIETAYLEPPANKF 101

Query: 181 GGGPPDIRPAFKHTFKTAATDSQKENRRYGVIECDPLVQKGLEKT 315
           G G PDI PAFKHT KT + DS   +RRYGVIECDP++QKGLEKT
Sbjct: 102 GDGGPDIFPAFKHTLKTISNDSNNGSRRYGVIECDPMIQKGLEKT 146