BLASTX nr result

ID: Glycyrrhiza23_contig00014269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014269
         (1977 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597250.1| Ribonuclease [Medicago truncatula] gi|355486...   466   e-128
ref|XP_003540172.1| PREDICTED: double-stranded RNA-binding prote...   463   e-128
ref|XP_003541993.1| PREDICTED: double-stranded RNA-binding prote...   451   e-124
ref|NP_001241242.1| uncharacterized protein LOC100812728 [Glycin...   408   e-111
ref|XP_003538171.1| PREDICTED: double-stranded RNA-binding prote...   405   e-110

>ref|XP_003597250.1| Ribonuclease [Medicago truncatula] gi|355486298|gb|AES67501.1|
           Ribonuclease [Medicago truncatula]
          Length = 408

 Score =  466 bits (1199), Expect = e-128
 Identities = 244/288 (84%), Positives = 250/288 (86%), Gaps = 1/288 (0%)
 Frame = -3

Query: 898 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 719
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 60

Query: 718 AEVALNSLSHRGPSHSLAAKILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 539
           AEVALNSLSHRGPSHSLAAKILDETGVYKNLLQEIAQRVGAPLPQYTT+RSGLGHLPVFT
Sbjct: 61  AEVALNSLSHRGPSHSLAAKILDETGVYKNLLQEIAQRVGAPLPQYTTYRSGLGHLPVFT 120

Query: 538 GIVELAGITFTGEPXXXXXXXXXXXXXXAWSSLKQLAKETASSSTEPENNDELEQITIAR 359
           GIVELAGITFTGEP              AWSSLKQLAKETASSSTEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETASSSTEPENNDELEQITIAR 180

Query: 358 ALLNYRLKEKMAMSNPNAPIPFQKKFQIQNXXXXXXXXXXXXXSKILPLICQKTSPRCRP 179
           ALLNYRLKEKM+MSNPNA IPFQKKFQIQN             SKILPLICQKT PR RP
Sbjct: 181 ALLNYRLKEKMSMSNPNARIPFQKKFQIQN-IRPTSSQSPATTSKILPLICQKTGPRNRP 239

Query: 178 SFATANENPRSRHPPVAATSDTSMV-PPQSSALESRGTRPLKFPAAGA 38
           S AT NENPRSRHP  AATSD S++  PQSSA+ESR TRPL+FPAAGA
Sbjct: 240 SSATPNENPRSRHPQAAATSDKSILQQPQSSAIESRVTRPLRFPAAGA 287


>ref|XP_003540172.1| PREDICTED: double-stranded RNA-binding protein 2-like [Glycine max]
          Length = 411

 Score =  463 bits (1191), Expect = e-128
 Identities = 238/289 (82%), Positives = 247/289 (85%), Gaps = 1/289 (0%)
 Frame = -3

Query: 898 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 719
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 60

Query: 718 AEVALNSLSHRGPSHSLAAKILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 539
           AEVALNSLSHRGPSHSLAAKILDETGVYKNLLQEIAQRVGAPLP YTT+RSGLGHLPVFT
Sbjct: 61  AEVALNSLSHRGPSHSLAAKILDETGVYKNLLQEIAQRVGAPLPHYTTYRSGLGHLPVFT 120

Query: 538 GIVELAGITFTGEPXXXXXXXXXXXXXXAWSSLKQLAKETASSSTEPENNDELEQITIAR 359
           GIVELAGITFTGEP              AWS+LKQLAKETASSSTEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKETASSSTEPENNDELEQITIAR 180

Query: 358 ALLNYRLKEKMAMSNPNAPIPFQKKFQIQNXXXXXXXXXXXXXSKILPLICQKTSPRCRP 179
           ALLNYRLKEKMAMSNPNAP+ F K+FQIQN             SKILPLICQKT+PR +P
Sbjct: 181 ALLNYRLKEKMAMSNPNAPVSFHKRFQIQNPRPISSQPPPATSSKILPLICQKTAPRSKP 240

Query: 178 SFA-TANENPRSRHPPVAATSDTSMVPPQSSALESRGTRPLKFPAAGAA 35
           S A TANE+PRSRHP  A TSD S +PPQS +LESR TRPLKF AAGAA
Sbjct: 241 SLATTANESPRSRHPQAAMTSDNSTLPPQSCSLESRATRPLKFRAAGAA 289


>ref|XP_003541993.1| PREDICTED: double-stranded RNA-binding protein 2-like [Glycine max]
          Length = 393

 Score =  451 bits (1160), Expect = e-124
 Identities = 233/292 (79%), Positives = 245/292 (83%), Gaps = 4/292 (1%)
 Frame = -3

Query: 898 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 719
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFE+PHYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFETPHYCSTLRQAEHSA 60

Query: 718 AEVALNSLSHRGPSHSLAAKILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 539
           AE ALNSLSHRGPSHSLAAKILDETGVYKNLLQEIAQRVGAPLP YTT+RSGLGHLPVFT
Sbjct: 61  AEAALNSLSHRGPSHSLAAKILDETGVYKNLLQEIAQRVGAPLPHYTTYRSGLGHLPVFT 120

Query: 538 GIVELAGITFTGEPXXXXXXXXXXXXXXAWSSLKQLAKETASSSTEPENNDELEQITIAR 359
           GIVELAGITFTGEP              AWS+LKQLAKETASSSTEPENNDE+EQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKETASSSTEPENNDEVEQITIAR 180

Query: 358 ALLNYRLKEKMAMSNPNAPIPFQKKFQIQNXXXXXXXXXXXXXSKILPLICQKTSPRCRP 179
           ALLNYRLKEKM MSNPNAP+PF ++FQIQN             SKILPLICQKT+PR +P
Sbjct: 181 ALLNYRLKEKMTMSNPNAPLPFHERFQIQNPRPISSQPPPATSSKILPLICQKTAPRSKP 240

Query: 178 SFA--TANENPRSRHP--PVAATSDTSMVPPQSSALESRGTRPLKFPAAGAA 35
           S A  T NE+P SRHP   VA TSD S +P QS +LE R TRPLKFPAAGAA
Sbjct: 241 SLATTTTNESPGSRHPQAAVAVTSDNSNLPQQSCSLECRATRPLKFPAAGAA 292


>ref|NP_001241242.1| uncharacterized protein LOC100812728 [Glycine max]
           gi|255644888|gb|ACU22944.1| unknown [Glycine max]
          Length = 401

 Score =  408 bits (1048), Expect = e-111
 Identities = 216/288 (75%), Positives = 226/288 (78%)
 Frame = -3

Query: 898 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 719
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 60

Query: 718 AEVALNSLSHRGPSHSLAAKILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 539
           AEVALNSLS+R PSHSLAA+ILDETGVYKNLLQEIAQRVGAPLPQY TFRSGLGHLPVFT
Sbjct: 61  AEVALNSLSNRAPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYFTFRSGLGHLPVFT 120

Query: 538 GIVELAGITFTGEPXXXXXXXXXXXXXXAWSSLKQLAKETASSSTEPENNDELEQITIAR 359
           G VELAGI FTGEP              AWSSLKQLAKETA SSTEPENNDELEQITIAR
Sbjct: 121 GTVELAGIMFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETARSSTEPENNDELEQITIAR 180

Query: 358 ALLNYRLKEKMAMSNPNAPIPFQKKFQIQNXXXXXXXXXXXXXSKILPLICQKTSPRCRP 179
           ALLNYRLKEK++MSN NAP+PF KKFQIQN             SKILPLICQK +PR R 
Sbjct: 181 ALLNYRLKEKISMSNSNAPVPFPKKFQIQNPRPTSPQPPPAATSKILPLICQKAAPRSRH 240

Query: 178 SFATANENPRSRHPPVAATSDTSMVPPQSSALESRGTRPLKFPAAGAA 35
               +         P  A+ D S +P  S+  ESRG R  KFPAAGAA
Sbjct: 241 LVGAS---------PARASCDNSAMPQLSATPESRGIRRPKFPAAGAA 279


>ref|XP_003538171.1| PREDICTED: double-stranded RNA-binding protein 2-like [Glycine max]
          Length = 411

 Score =  405 bits (1040), Expect = e-110
 Identities = 215/288 (74%), Positives = 227/288 (78%)
 Frame = -3

Query: 898 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 719
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 60

Query: 718 AEVALNSLSHRGPSHSLAAKILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 539
           AEVALNSLS+R PSHSLAA+ILDETGVYKNLLQEIAQRVGAPLPQY TFRSGLGHLPVFT
Sbjct: 61  AEVALNSLSNRAPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYFTFRSGLGHLPVFT 120

Query: 538 GIVELAGITFTGEPXXXXXXXXXXXXXXAWSSLKQLAKETASSSTEPENNDELEQITIAR 359
           G VELAGI FTGEP              AWSSLKQLAKETA SSTEPENNDELEQITIAR
Sbjct: 121 GTVELAGIMFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETARSSTEPENNDELEQITIAR 180

Query: 358 ALLNYRLKEKMAMSNPNAPIPFQKKFQIQNXXXXXXXXXXXXXSKILPLICQKTSPRCRP 179
           ALLNYRLKEK++MSN NAP+PF KKFQIQN             SKILPLICQK + R R 
Sbjct: 181 ALLNYRLKEKISMSNSNAPVPFPKKFQIQNPRPTSPQPPPATTSKILPLICQKGAHRSRH 240

Query: 178 SFATANENPRSRHPPVAATSDTSMVPPQSSALESRGTRPLKFPAAGAA 35
             A +         P  A+SD S++P   +  +SRG R  KFPAAGAA
Sbjct: 241 LVAAS---------PAPASSDNSVMPQLPATPDSRGIRRPKFPAAGAA 279


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