BLASTX nr result

ID: Glycyrrhiza23_contig00014257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014257
         (1947 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522829.1| PREDICTED: actin-related protein 8-like [Gly...   398   e-108
ref|XP_003598309.1| Actin related protein [Medicago truncatula] ...   394   e-107
ref|XP_002300588.1| actin related protein [Populus trichocarpa] ...   332   2e-88
ref|XP_002264128.1| PREDICTED: actin-related protein 8 [Vitis vi...   328   2e-87
emb|CAN62263.1| hypothetical protein VITISV_013986 [Vitis vinifera]   328   2e-87

>ref|XP_003522829.1| PREDICTED: actin-related protein 8-like [Glycine max]
          Length = 477

 Score =  398 bits (1022), Expect = e-108
 Identities = 199/265 (75%), Positives = 219/265 (82%), Gaps = 13/265 (4%)
 Frame = -2

Query: 758 MWMVVNKVWEMVSGRNNRSL-------------PEEVVVFRDHMGAFEQLPSDILMQILK 618
           M M++ KVWE V  R++ S              P EV      MG  E LPSDILM IL+
Sbjct: 1   MSMLLRKVWERVLWRSDSSTSASASASSSSSSSPPEVAC--SDMGELELLPSDILMHILR 58

Query: 617 FLGPKEAAKLGLTCRALRLLVSDNRLWLHFIQTHQAEPSWDSVFFAETTLTYGYPLPSFV 438
            LGPKEAAKL + C+ALR LVSDNRLW+HF+QTHQAEPS DSVFFAETTL+YGYPLP F 
Sbjct: 59  LLGPKEAAKLSVVCKALRSLVSDNRLWIHFLQTHQAEPSGDSVFFAETTLSYGYPLPPFA 118

Query: 437 SQRPQLSFKHIYGQRAQVPGAIIIDGGSGYCKFGWSKYACPSGQAATFLEFGNIETPMYT 258
              PQLSFKHIYGQRA VPG+IIIDGGSGYCKFGWSKYA PSG++ATFLEFGNIE+PMYT
Sbjct: 119 GHWPQLSFKHIYGQRALVPGSIIIDGGSGYCKFGWSKYAYPSGRSATFLEFGNIESPMYT 178

Query: 257 RLRHFFSTIYNRMQVKPNKQPVIVSIPICHYEDTQSAKEKRRQLKEAIYASLFDMNVPAV 78
           RLRHFF+TIYNRMQVKPNKQPVIVS+PICHY+DT+SAK  R+QLKEAIYASLFDMNVPAV
Sbjct: 179 RLRHFFATIYNRMQVKPNKQPVIVSVPICHYDDTESAKASRQQLKEAIYASLFDMNVPAV 238

Query: 77  CAVNQATLALYAAKRTSGIAVNIGF 3
           CA+NQATLALYAAKRTSGI VNIGF
Sbjct: 239 CAINQATLALYAAKRTSGIVVNIGF 263


>ref|XP_003598309.1| Actin related protein [Medicago truncatula]
           gi|355487357|gb|AES68560.1| Actin related protein
           [Medicago truncatula]
          Length = 471

 Score =  394 bits (1012), Expect = e-107
 Identities = 194/257 (75%), Positives = 221/257 (85%), Gaps = 5/257 (1%)
 Frame = -2

Query: 758 MWMVVNKVWEMVSGRNNRSLPEE-----VVVFRDHMGAFEQLPSDILMQILKFLGPKEAA 594
           M +V+ K+ E++  RN  S  E+     + +    MG  +QLPSDIL+QIL+ LGPKE A
Sbjct: 1   MSIVLRKLLEIILKRNPTSSDEQQQQQVLPLPYGDMGELDQLPSDILIQILRLLGPKEVA 60

Query: 593 KLGLTCRALRLLVSDNRLWLHFIQTHQAEPSWDSVFFAETTLTYGYPLPSFVSQRPQLSF 414
           KL + C++L+  VSDNRLWLHF+QTHQ++PSWDSVFFAET L  GYPLPSF  QRPQLSF
Sbjct: 61  KLSVICKSLKFSVSDNRLWLHFLQTHQSDPSWDSVFFAETNLISGYPLPSF-GQRPQLSF 119

Query: 413 KHIYGQRAQVPGAIIIDGGSGYCKFGWSKYACPSGQAATFLEFGNIETPMYTRLRHFFST 234
           KHIYGQRAQVPGAIIIDGGSGYCKFGWSKYACPSG++ATFLEFGNIE+PMYTRLRHFF+T
Sbjct: 120 KHIYGQRAQVPGAIIIDGGSGYCKFGWSKYACPSGRSATFLEFGNIESPMYTRLRHFFAT 179

Query: 233 IYNRMQVKPNKQPVIVSIPICHYEDTQSAKEKRRQLKEAIYASLFDMNVPAVCAVNQATL 54
           IYNRMQVKP  QPVIVSIPICHY+DT+SA+  R+QLKEAIYASLFD+NVPAVCAVNQATL
Sbjct: 180 IYNRMQVKPKNQPVIVSIPICHYDDTESARASRQQLKEAIYASLFDLNVPAVCAVNQATL 239

Query: 53  ALYAAKRTSGIAVNIGF 3
           ALYAAKRTSGIAVNIGF
Sbjct: 240 ALYAAKRTSGIAVNIGF 256


>ref|XP_002300588.1| actin related protein [Populus trichocarpa]
           gi|222847846|gb|EEE85393.1| actin related protein
           [Populus trichocarpa]
          Length = 473

 Score =  332 bits (851), Expect = 2e-88
 Identities = 156/261 (59%), Positives = 206/261 (78%), Gaps = 9/261 (3%)
 Frame = -2

Query: 758 MWMVVNKVWEMVSGR---------NNRSLPEEVVVFRDHMGAFEQLPSDILMQILKFLGP 606
           M M++ KVWE VS R         ++ + P         +GAF++LP D+++QI++ +GP
Sbjct: 1   MAMLLKKVWESVSNRATSFSSSSIDSVTTPLSYTESSSSLGAFDRLPIDVVLQIVRLVGP 60

Query: 605 KEAAKLGLTCRALRLLVSDNRLWLHFIQTHQAEPSWDSVFFAETTLTYGYPLPSFVSQRP 426
           K+AA+L + C++ R LVSDNRLW++F+Q +    +WDSVFF ET L  GYP+ +F S   
Sbjct: 61  KDAARLSVVCKSWRPLVSDNRLWIYFLQNYH--DTWDSVFFVETHLRSGYPIQTFSSPIT 118

Query: 425 QLSFKHIYGQRAQVPGAIIIDGGSGYCKFGWSKYACPSGQAATFLEFGNIETPMYTRLRH 246
           +LSF  IYGQR QVPGA+I+DGGSG+CK+GWSK ACPSG++ATFLEFGNIE+PMY+RL+H
Sbjct: 119 ELSFMRIYGQRVQVPGAVIVDGGSGHCKYGWSKNACPSGRSATFLEFGNIESPMYSRLQH 178

Query: 245 FFSTIYNRMQVKPNKQPVIVSIPICHYEDTQSAKEKRRQLKEAIYASLFDMNVPAVCAVN 66
           FF+TIY+RMQVK +  P++VS+P+CHY+DT+SA+  RRQLK+AIY +LFDMNVPAVCA+N
Sbjct: 179 FFATIYSRMQVKASAHPIVVSLPLCHYDDTESARASRRQLKDAIYTALFDMNVPAVCAIN 238

Query: 65  QATLALYAAKRTSGIAVNIGF 3
           QATLALYAA+RTSGI VNIGF
Sbjct: 239 QATLALYAAQRTSGIVVNIGF 259


>ref|XP_002264128.1| PREDICTED: actin-related protein 8 [Vitis vinifera]
           gi|296090034|emb|CBI39853.3| unnamed protein product
           [Vitis vinifera]
          Length = 473

 Score =  328 bits (842), Expect = 2e-87
 Identities = 160/256 (62%), Positives = 200/256 (78%), Gaps = 4/256 (1%)
 Frame = -2

Query: 758 MWMVVNKVWEMVSGRNNRSLPEEV---VVFRDHMGAFEQLPSDILMQILKFLGPKEAAKL 588
           M  ++ KVWE VS R++++  E     VV +   GAF  +P D+ M IL+FL P+E AKL
Sbjct: 1   MAALLRKVWESVS-RSSKATSESSDRRVVVQSSTGAFSHIPFDVFMHILQFLEPREVAKL 59

Query: 587 GLTCRALRLLVSDNRLWLHFIQTHQAEP-SWDSVFFAETTLTYGYPLPSFVSQRPQLSFK 411
            L C+  + LVSDN+LWL+ +Q  Q +P SWDS+ FAET L  GYPL +F  Q PQLSF 
Sbjct: 60  SLVCKYWKFLVSDNQLWLYLLQKEQNQPGSWDSLVFAETHLQMGYPLLTFNDQMPQLSFM 119

Query: 410 HIYGQRAQVPGAIIIDGGSGYCKFGWSKYACPSGQAATFLEFGNIETPMYTRLRHFFSTI 231
           HI+G+RA+ PGAIIIDGGSGYCK+GWSKY   +G +ATFLEFGNIETP+Y+RLRHF +TI
Sbjct: 120 HIFGRRAKAPGAIIIDGGSGYCKYGWSKYDTTTGMSATFLEFGNIETPIYSRLRHFLATI 179

Query: 230 YNRMQVKPNKQPVIVSIPICHYEDTQSAKEKRRQLKEAIYASLFDMNVPAVCAVNQATLA 51
           Y+RM VKP+ QP+++S+PICHY+D +SAK  RRQLKE I++ LFDMNVPAVCA+NQATLA
Sbjct: 180 YSRMHVKPSAQPIVLSVPICHYDDNESAKASRRQLKETIHSVLFDMNVPAVCAINQATLA 239

Query: 50  LYAAKRTSGIAVNIGF 3
           LYAAK+TSGI VNIGF
Sbjct: 240 LYAAKQTSGIVVNIGF 255


>emb|CAN62263.1| hypothetical protein VITISV_013986 [Vitis vinifera]
          Length = 451

 Score =  328 bits (842), Expect = 2e-87
 Identities = 160/256 (62%), Positives = 200/256 (78%), Gaps = 4/256 (1%)
 Frame = -2

Query: 758 MWMVVNKVWEMVSGRNNRSLPEEV---VVFRDHMGAFEQLPSDILMQILKFLGPKEAAKL 588
           M  ++ KVWE VS R++++  E     VV +   GAF  +P D+ M IL+FL P+E AKL
Sbjct: 1   MAALLRKVWESVS-RSSKATSESSDRRVVVQSSTGAFSHIPFDVFMHILQFLEPREVAKL 59

Query: 587 GLTCRALRLLVSDNRLWLHFIQTHQAEP-SWDSVFFAETTLTYGYPLPSFVSQRPQLSFK 411
            L C+  + LVSDN+LWL+ +Q  Q +P SWDS+ FAET L  GYPL +F  Q PQLSF 
Sbjct: 60  SLVCKYWKFLVSDNQLWLYLLQKEQNQPGSWDSLVFAETHLQMGYPLLTFNDQMPQLSFM 119

Query: 410 HIYGQRAQVPGAIIIDGGSGYCKFGWSKYACPSGQAATFLEFGNIETPMYTRLRHFFSTI 231
           HI+G+RA+ PGAIIIDGGSGYCK+GWSKY   +G +ATFLEFGNIETP+Y+RLRHF +TI
Sbjct: 120 HIFGRRAKAPGAIIIDGGSGYCKYGWSKYDTTTGMSATFLEFGNIETPIYSRLRHFLATI 179

Query: 230 YNRMQVKPNKQPVIVSIPICHYEDTQSAKEKRRQLKEAIYASLFDMNVPAVCAVNQATLA 51
           Y+RM VKP+ QP+++S+PICHY+D +SAK  RRQLKE I++ LFDMNVPAVCA+NQATLA
Sbjct: 180 YSRMHVKPSAQPIVLSVPICHYDDNESAKASRRQLKETIHSVLFDMNVPAVCAINQATLA 239

Query: 50  LYAAKRTSGIAVNIGF 3
           LYAAK+TSGI VNIGF
Sbjct: 240 LYAAKQTSGIVVNIGF 255


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