BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014172
         (1129 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534128.1| PREDICTED: pentatricopeptide repeat-containi...   576   e-162
ref|XP_003614316.1| Pentatricopeptide repeat-containing protein ...   574   e-161
ref|XP_003619886.1| Pentatricopeptide repeat-containing protein ...   520   e-145
ref|XP_002301440.1| predicted protein [Populus trichocarpa] gi|2...   508   e-141
ref|XP_002515072.1| pentatricopeptide repeat-containing protein,...   494   e-137

>ref|XP_003534128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05600-like
            [Glycine max]
          Length = 502

 Score =  576 bits (1484), Expect = e-162
 Identities = 278/323 (86%), Positives = 303/323 (93%)
 Frame = +1

Query: 160  MSVRWPRVLTPTYLSQIIRTQKNPLKALHIFNEAKCRYPKYSHNGPAYATMITILGTSGR 339
            MS+RWPRVLTPTYLSQII+TQKNPLKAL+IFNEAK RYP Y HNGP YATMI+ILGTSGR
Sbjct: 1    MSIRWPRVLTPTYLSQIIKTQKNPLKALNIFNEAKSRYPNYYHNGPVYATMISILGTSGR 60

Query: 340  ITEMRGVIEQMREDSCECKDSVFVSAIKTYAKAGLVDEAISLYKNIPQFNCVNWTESFNT 519
            + EMR VIEQM+EDSCECKDSVFVS IKTYA AGLVDEAISLYK+IP+FNCVNWTESFNT
Sbjct: 61   LNEMRDVIEQMKEDSCECKDSVFVSVIKTYANAGLVDEAISLYKSIPRFNCVNWTESFNT 120

Query: 520  LLQIMVNENRLEAAHRLFVESSCGWQVKSRIQALNLLMYALCQKSRSDLALQIFQEMDYQ 699
            +LQIMV ENRLE AHRLFVESSCGW+V+S ++ALNLLMYALCQKSRSDLALQ+FQEMDYQ
Sbjct: 121  MLQIMVKENRLEIAHRLFVESSCGWEVRSLVRALNLLMYALCQKSRSDLALQLFQEMDYQ 180

Query: 700  GCYPNRDSYAILMKGLCQDKRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCDNGK 879
             CYPNRDSYAILMKGLCQD+RLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCD GK
Sbjct: 181  SCYPNRDSYAILMKGLCQDRRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCDAGK 240

Query: 880  FEEAMEILGKILRKGLKAPKRCYNQLDLGHCSDGKDIEGAKRLIHDALVRGSVPSLVSYN 1059
            FEEA EILGKILRKGLKAPKRC+++LDL   SDGKDIE AKR+IH+AL++GSVPSL SYN
Sbjct: 241  FEEAEEILGKILRKGLKAPKRCHSRLDLDQLSDGKDIESAKRMIHEALIKGSVPSLASYN 300

Query: 1060 AMAVDLYSEGKIGEADEVIVEMR 1128
            AMAVDLYSEGKI EAD+VI+EM+
Sbjct: 301  AMAVDLYSEGKIDEADKVIIEMQ 323



 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 1/208 (0%)
 Frame = +1

Query: 508  SFNTLLQIMVNENRLEAAHRLFVESSCGWQVKSRIQALNLLMYALCQKSRSDLALQIFQE 687
            S+N +   + +E +++ A ++ +E       K         + ALC+ S+ D A+++ +E
Sbjct: 298  SYNAMAVDLYSEGKIDEADKVIIEMQVRG-FKPTHSIFEAKVAALCKVSKVDEAIKVIEE 356

Query: 688  -MDYQGCYPNRDSYAILMKGLCQDKRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDAL 864
             M    C P    Y IL+K LC    +  +T +L S+    S+ G   D   Y  LL+ L
Sbjct: 357  DMVKVNCLPTAKVYNILLKNLCN---VGNSTAILESLNKMSSKVGCTGDRDTYSILLEML 413

Query: 865  CDNGKFEEAMEILGKILRKGLKAPKRCYNQLDLGHCSDGKDIEGAKRLIHDALVRGSVPS 1044
            C   ++ EA ++L K+  K        YN L  G CS G+  E A   + D + +G +P 
Sbjct: 414  CGERRYLEASQLLEKMSIKSYWPCTNSYNSLIRGLCSIGRQYE-AVMWLEDMISQGKLPE 472

Query: 1045 LVSYNAMAVDLYSEGKIGEADEVIVEMR 1128
            +  +N++A    +  KI  + E    +R
Sbjct: 473  ISVWNSLASLFCNSEKIKVSSETFSRLR 500



 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 5/210 (2%)
 Frame = +1

Query: 298 AYATMITILGTSGRITEMRGVIEQMREDSCECKDSVFVSAIKTYAKAGLVDEAIS-LYKN 474
           +Y  M   L + G+I E   VI +M+    +   S+F + +    K   VDEAI  + ++
Sbjct: 298 SYNAMAVDLYSEGKIDEADKVIIEMQVRGFKPTHSIFEAKVAALCKVSKVDEAIKVIEED 357

Query: 475 IPQFNCVNWTESFNTLLQIMVNENR----LEAAHRLFVESSCGWQVKSRIQALNLLMYAL 642
           + + NC+   + +N LL+ + N       LE+ +++  +  C           ++L+  L
Sbjct: 358 MVKVNCLPTAKVYNILLKNLCNVGNSTAILESLNKMSSKVGC----TGDRDTYSILLEML 413

Query: 643 CQKSRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCQDKRLHEATHLLYSMFWRISQKGN 822
           C + R   A Q+ ++M  +  +P  +SY  L++GLC   R +EA   L  M   ISQ G 
Sbjct: 414 CGERRYLEASQLLEKMSIKSYWPCTNSYNSLIRGLCSIGRQYEAVMWLEDM---ISQ-GK 469

Query: 823 GEDIVVYRTLLDALCDNGKFEEAMEILGKI 912
             +I V+ +L    C++ K + + E   ++
Sbjct: 470 LPEISVWNSLASLFCNSEKIKVSSETFSRL 499


>ref|XP_003614316.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355515651|gb|AES97274.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 504

 Score =  574 bits (1479), Expect = e-161
 Identities = 275/324 (84%), Positives = 299/324 (92%)
 Frame = +1

Query: 157  SMSVRWPRVLTPTYLSQIIRTQKNPLKALHIFNEAKCRYPKYSHNGPAYATMITILGTSG 336
            SMS+RWPRVL PTYL+QIIRTQKNPLKAL IFNEAK +YPKYSHNGP YATMI ILGTSG
Sbjct: 2    SMSIRWPRVLNPTYLTQIIRTQKNPLKALEIFNEAKLKYPKYSHNGPVYATMINILGTSG 61

Query: 337  RITEMRGVIEQMREDSCECKDSVFVSAIKTYAKAGLVDEAISLYKNIPQFNCVNWTESFN 516
            R+ EM  +IEQM+EDSCECKDSVFVSAIKTYAK GLVDEAISLYKNIPQFNCVNWT+SFN
Sbjct: 62   RLKEMSDLIEQMKEDSCECKDSVFVSAIKTYAKEGLVDEAISLYKNIPQFNCVNWTQSFN 121

Query: 517  TLLQIMVNENRLEAAHRLFVESSCGWQVKSRIQALNLLMYALCQKSRSDLALQIFQEMDY 696
            TLL+IMVNEN+LE AH LFVESSCGW+VKSR+QALNLLMYALC+KSRSDLALQIFQEMDY
Sbjct: 122  TLLEIMVNENKLEDAHSLFVESSCGWEVKSRVQALNLLMYALCRKSRSDLALQIFQEMDY 181

Query: 697  QGCYPNRDSYAILMKGLCQDKRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCDNG 876
            QGCYPNR+SY I+MKGLCQDKRLHEATHLLYSMFWRIS KGNGEDIV+YRTLLDALCDNG
Sbjct: 182  QGCYPNRESYLIVMKGLCQDKRLHEATHLLYSMFWRISLKGNGEDIVIYRTLLDALCDNG 241

Query: 877  KFEEAMEILGKILRKGLKAPKRCYNQLDLGHCSDGKDIEGAKRLIHDALVRGSVPSLVSY 1056
            KF+EA+EILGKILRKGLKAPKRCYN+LD+  C DGKD E  KR IH+ALVRGSVPS  SY
Sbjct: 242  KFDEAVEILGKILRKGLKAPKRCYNRLDISQCGDGKDAEVTKRWIHEALVRGSVPSTASY 301

Query: 1057 NAMAVDLYSEGKIGEADEVIVEMR 1128
             +MAVDLY EGKI EAD+VI+EM+
Sbjct: 302  TSMAVDLYEEGKIDEADKVIIEMK 325



 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 54/210 (25%), Positives = 108/210 (51%), Gaps = 5/210 (2%)
 Frame = +1

Query: 298 AYATMITILGTSGRITEMRGVIEQMREDSCECKDSVFVSAIKTYAKAGLVDEAIS-LYKN 474
           +Y +M   L   G+I E   VI +M++   + K S+F + +    K G VDEAI  + ++
Sbjct: 300 SYTSMAVDLYEEGKIDEADKVIIEMKDRRFKPKHSIFEAKVAALCKVGKVDEAIKVIEED 359

Query: 475 IPQFNCVNWTESFNTLLQ----IMVNENRLEAAHRLFVESSCGWQVKSRIQALNLLMYAL 642
           + + NC+     +  LL+    +  + + LE+ +++  + +C     +  +   +L+  L
Sbjct: 360 MVEVNCLPNATVYTILLKNLGGVGNSTSVLESLNKMSKKVNC----MADKETYCILLEML 415

Query: 643 CQKSRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCQDKRLHEATHLLYSMFWRISQKGN 822
           C++ +   A Q+ ++M  +  +P  ++Y +L++GLC   R +EA   L  M   ISQ G 
Sbjct: 416 CRERKYLEASQLLEQMSIKSYWPCANTYNLLIEGLCSLGRQYEAVMWLEDM---ISQ-GK 471

Query: 823 GEDIVVYRTLLDALCDNGKFEEAMEILGKI 912
             +I V+ +L  + C++G  + + E   +I
Sbjct: 472 LPEISVWNSLASSFCNSGMMKVSTETFDRI 501



 Score = 63.9 bits (154), Expect = 7e-08
 Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 2/211 (0%)
 Frame = +1

Query: 502  TESFNTLLQIMVNENRLEAAHRLFVESSCGWQVKSRIQALNLLMYALCQKSRSDLALQIF 681
            T S+ ++   +  E +++ A ++ +E     + K +       + ALC+  + D A+++ 
Sbjct: 298  TASYTSMAVDLYEEGKIDEADKVIIEMK-DRRFKPKHSIFEAKVAALCKVGKVDEAIKVI 356

Query: 682  QE-MDYQGCYPNRDSYAILMKGLCQDKRLHEATHLLYSMFWRISQKGNG-EDIVVYRTLL 855
            +E M    C PN   Y IL+K L     +  +T +L S+  ++S+K N   D   Y  LL
Sbjct: 357  EEDMVEVNCLPNATVYTILLKNL---GGVGNSTSVLESLN-KMSKKVNCMADKETYCILL 412

Query: 856  DALCDNGKFEEAMEILGKILRKGLKAPKRCYNQLDLGHCSDGKDIEGAKRLIHDALVRGS 1035
            + LC   K+ EA ++L ++  K        YN L  G CS G+  E A   + D + +G 
Sbjct: 413  EMLCRERKYLEASQLLEQMSIKSYWPCANTYNLLIEGLCSLGRQYE-AVMWLEDMISQGK 471

Query: 1036 VPSLVSYNAMAVDLYSEGKIGEADEVIVEMR 1128
            +P +  +N++A    + G +  + E    +R
Sbjct: 472  LPEISVWNSLASSFCNSGMMKVSTETFDRIR 502


>ref|XP_003619886.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355494901|gb|AES76104.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 576

 Score =  520 bits (1338), Expect = e-145
 Identities = 254/323 (78%), Positives = 279/323 (86%)
 Frame = +1

Query: 160  MSVRWPRVLTPTYLSQIIRTQKNPLKALHIFNEAKCRYPKYSHNGPAYATMITILGTSGR 339
            MS+RWPRVL PTYL+QIIRTQKNPLKAL IFNEAK +YP YSHNGP YATMI ILGTSGR
Sbjct: 1    MSIRWPRVLNPTYLTQIIRTQKNPLKALEIFNEAKSKYPNYSHNGPVYATMINILGTSGR 60

Query: 340  ITEMRGVIEQMREDSCECKDSVFVSAIKTYAKAGLVDEAISLYKNIPQFNCVNWTESFNT 519
            + EM  +IEQM+EDS                   LVDEAISLYKNIPQFNCVNWT+SFNT
Sbjct: 61   LKEMSDLIEQMKEDSW------------------LVDEAISLYKNIPQFNCVNWTQSFNT 102

Query: 520  LLQIMVNENRLEAAHRLFVESSCGWQVKSRIQALNLLMYALCQKSRSDLALQIFQEMDYQ 699
            LL+IMVNEN+LE AH LFVESSCGW+VKSR+QALNLLMYALC+KSRSDLALQIFQEMDYQ
Sbjct: 103  LLKIMVNENKLEDAHSLFVESSCGWEVKSRVQALNLLMYALCRKSRSDLALQIFQEMDYQ 162

Query: 700  GCYPNRDSYAILMKGLCQDKRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCDNGK 879
             CYPNR+SY I+MKGLCQDKRLHEATHLLYSMFWRIS KGNGEDIV+YRTLLDALCDNGK
Sbjct: 163  DCYPNRESYLIVMKGLCQDKRLHEATHLLYSMFWRISLKGNGEDIVIYRTLLDALCDNGK 222

Query: 880  FEEAMEILGKILRKGLKAPKRCYNQLDLGHCSDGKDIEGAKRLIHDALVRGSVPSLVSYN 1059
            F+EA+EILGKILRKGLKAPKRCYN+LD+  C DGKD+E  KR IH+ALVRGSVPS  SY 
Sbjct: 223  FDEAVEILGKILRKGLKAPKRCYNRLDITQCGDGKDVEVTKRWIHEALVRGSVPSTASYT 282

Query: 1060 AMAVDLYSEGKIGEADEVIVEMR 1128
            +MAVDLY EGKI EAD+VI+EM+
Sbjct: 283  SMAVDLYEEGKIDEADKVIIEMK 305



 Score = 74.7 bits (182), Expect = 4e-11
 Identities = 67/303 (22%), Positives = 137/303 (45%), Gaps = 26/303 (8%)
 Frame = +1

Query: 298  AYATMITILGTSGRITEMRGVIEQMREDSCECKDSVFVSAIKTYAKAGLVDEAISLYK-N 474
            +Y +M   L   G+I E   VI +M++     K S+F + +    K G VDEAI + + +
Sbjct: 280  SYTSMAVDLYEEGKIDEADKVIIEMKDRRFRPKHSIFEAKVAALCKVGKVDEAIKVIEED 339

Query: 475  IPQFNCVNWTESFNTLLQ----IMVNENRLEAAHRLFVESSCGWQVKSRIQALNLLMYAL 642
            + + NC+     +  LL+    +  + + LE+ +++  + +C     +  +   +L+  L
Sbjct: 340  MVEVNCLPNARVYTILLKNIRSVGNSTSVLESLNKMSKKVNC----MADKETYCILLEML 395

Query: 643  CQKSRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCQDKRLHEATHLLYSMFWRISQKGN 822
            C++ +   A Q+ ++M  +  +P+ +SY +L++GLC   R +EA   L  M   ISQ G 
Sbjct: 396  CREGKYLQASQLLEQMSIKSYWPSANSYNLLIEGLCSLGRQYEAVMWLEDM---ISQ-GK 451

Query: 823  GEDIVVYRTLLDALCDNGKFEEAMEILGKILRKGLKAPKRCYN----------------- 951
              +I V+ +L  + C++G  + + E   ++          C +                 
Sbjct: 452  LPEISVWNSLASSFCNSGMMKVSAETFNQMNISYCFTSFHCASDSVLTLMGFIFFLKRAS 511

Query: 952  ----QLDLGHCSDGKDIEGAKRLIHDALVRGSVPSLVSYNAMAVDLYSEGKIGEADEVIV 1119
                 + +G     KD+  A   + D + +G +P +  +N++A    + G +  + E   
Sbjct: 512  PYGLSMGMGMNIAHKDLRKALMWLEDMISQGKLPEISVWNSLASSFCNSGMMKVSAETFN 571

Query: 1120 EMR 1128
             +R
Sbjct: 572  RIR 574



 Score = 67.8 bits (164), Expect = 5e-09
 Identities = 66/290 (22%), Positives = 128/290 (44%), Gaps = 15/290 (5%)
 Frame = +1

Query: 301  YATMITILGTSGRITEMRGVIEQM-------------REDSCECKDSVFVSAIKTYAKAG 441
            Y T++  L  +G+  E   ++ ++             R D  +C D   V   K +    
Sbjct: 210  YRTLLDALCDNGKFDEAVEILGKILRKGLKAPKRCYNRLDITQCGDGKDVEVTKRWIHEA 269

Query: 442  LVDEAISLYKNIPQFNCVNWTESFNTLLQIMVNENRLEAAHRLFVESSCGWQVKSRIQAL 621
            LV  ++              T S+ ++   +  E +++ A ++ +E     + + +    
Sbjct: 270  LVRGSVPS------------TASYTSMAVDLYEEGKIDEADKVIIEMK-DRRFRPKHSIF 316

Query: 622  NLLMYALCQKSRSDLALQIFQE-MDYQGCYPNRDSYAILMKGLCQDKRLHEATHLLYSMF 798
               + ALC+  + D A+++ +E M    C PN   Y IL+K +   + +  +T +L S+ 
Sbjct: 317  EAKVAALCKVGKVDEAIKVIEEDMVEVNCLPNARVYTILLKNI---RSVGNSTSVLESLN 373

Query: 799  WRISQKGNG-EDIVVYRTLLDALCDNGKFEEAMEILGKILRKGLKAPKRCYNQLDLGHCS 975
             ++S+K N   D   Y  LL+ LC  GK+ +A ++L ++  K        YN L  G CS
Sbjct: 374  -KMSKKVNCMADKETYCILLEMLCREGKYLQASQLLEQMSIKSYWPSANSYNLLIEGLCS 432

Query: 976  DGKDIEGAKRLIHDALVRGSVPSLVSYNAMAVDLYSEGKIGEADEVIVEM 1125
             G+  E A   + D + +G +P +  +N++A    + G +  + E   +M
Sbjct: 433  LGRQYE-AVMWLEDMISQGKLPEISVWNSLASSFCNSGMMKVSAETFNQM 481


>ref|XP_002301440.1| predicted protein [Populus trichocarpa] gi|222843166|gb|EEE80713.1|
            predicted protein [Populus trichocarpa]
          Length = 503

 Score =  508 bits (1308), Expect = e-141
 Identities = 243/321 (75%), Positives = 284/321 (88%)
 Frame = +1

Query: 160  MSVRWPRVLTPTYLSQIIRTQKNPLKALHIFNEAKCRYPKYSHNGPAYATMITILGTSGR 339
            MS+RWPR+LTPT LSQI+R+QKNPL AL IF +AK +YP Y HNGP YATMI+ILG S R
Sbjct: 1    MSIRWPRLLTPTQLSQILRSQKNPLTALQIFKDAKDKYPSYHHNGPVYATMISILGNSDR 60

Query: 340  ITEMRGVIEQMREDSCECKDSVFVSAIKTYAKAGLVDEAISLYKNIPQFNCVNWTESFNT 519
            I EM+ VI+QMR+DSCECKDSVFV+AIKTYA AG + EA+SL+KNIP+FNCVNWTESFNT
Sbjct: 61   IAEMKEVIDQMRDDSCECKDSVFVTAIKTYASAGQISEAVSLFKNIPKFNCVNWTESFNT 120

Query: 520  LLQIMVNENRLEAAHRLFVESSCGWQVKSRIQALNLLMYALCQKSRSDLALQIFQEMDYQ 699
            LLQI+V E++LE AHR F+E+SCGW+VKSRI+ALNLL+  LCQ++RSDLALQIFQEMDYQ
Sbjct: 121  LLQILVKESKLETAHRFFLENSCGWEVKSRIRALNLLLDVLCQRNRSDLALQIFQEMDYQ 180

Query: 700  GCYPNRDSYAILMKGLCQDKRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCDNGK 879
            GCYPNRDSY ILM+GLC+D RL+EATHLLYSMFWRISQKG+GEDIVVYRTLLDALCDNG+
Sbjct: 181  GCYPNRDSYRILMRGLCEDGRLNEATHLLYSMFWRISQKGSGEDIVVYRTLLDALCDNGQ 240

Query: 880  FEEAMEILGKILRKGLKAPKRCYNQLDLGHCSDGKDIEGAKRLIHDALVRGSVPSLVSYN 1059
             EEAMEILGKILRKGLKAPKR  ++LDL  C++ +DIE  K LI++AL+RG VPSL SY 
Sbjct: 241  VEEAMEILGKILRKGLKAPKRYRHRLDLSQCNNCEDIEATKLLINEALIRGGVPSLASYT 300

Query: 1060 AMAVDLYSEGKIGEADEVIVE 1122
            AMAVDLY EGK G+AD+V+ E
Sbjct: 301  AMAVDLYCEGKTGQADKVLDE 321



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 9/159 (5%)
 Frame = +1

Query: 637  ALCQKSRSDLALQIFQ-EMDYQGCYPNRDSYAILMKGLCQDKRLHEATHLLYSMFWRISQ 813
            ALC++ RS  A+ + + EM  +   PN   Y +L+KGLC       A   L  M  ++  
Sbjct: 340  ALCRQGRSGEAINVIEREMVERNSVPNVRLYNVLLKGLCDAGNSAIAVSYLKRMAKQVGC 399

Query: 814  KGNGEDIVVYRTLLDALCDNGKFEEAMEILGKILRKGLKAPKRCYNQLDLGHCSDGKDIE 993
              N E    Y  L+D LC +G+F EA ++L ++L K    P   YN L  G  S G+  E
Sbjct: 400  VANQE---TYGILVDGLCRDGRFVEASKVLEEMLIKSYWPPADTYNILIRGLSSMGRQYE 456

Query: 994  G--------AKRLIHDALVRGSVPSLVSYNAMAVDLYSE 1086
                     ++  + +  V  S+ + V  N +AVD+  E
Sbjct: 457  AVIWLEEMVSQDKLPELYVWRSLVTSVCCNMVAVDVSCE 495


>ref|XP_002515072.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545552|gb|EEF47056.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score =  494 bits (1273), Expect = e-137
 Identities = 234/321 (72%), Positives = 283/321 (88%)
 Frame = +1

Query: 160  MSVRWPRVLTPTYLSQIIRTQKNPLKALHIFNEAKCRYPKYSHNGPAYATMITILGTSGR 339
            M+VRWPR+LTPT+LSQIIR QKNPL AL IF EAK +YP Y HNGP YATMI ILG+SGR
Sbjct: 1    MTVRWPRLLTPTHLSQIIRNQKNPLIALRIFKEAKDKYPNYRHNGPVYATMIGILGSSGR 60

Query: 340  ITEMRGVIEQMREDSCECKDSVFVSAIKTYAKAGLVDEAISLYKNIPQFNCVNWTESFNT 519
            ITEM+ V++QMREDSCECKDS+F +AIKTYA+ GL++EAISL+KNIPQFNCVNWTESFNT
Sbjct: 61   ITEMKEVLDQMREDSCECKDSIFANAIKTYARVGLLNEAISLFKNIPQFNCVNWTESFNT 120

Query: 520  LLQIMVNENRLEAAHRLFVESSCGWQVKSRIQALNLLMYALCQKSRSDLALQIFQEMDYQ 699
            LLQIMV E++LEAAHRLF+ESS GW+VKSR+++LNLLM  LCQ +RSD+ALQ+FQEM+YQ
Sbjct: 121  LLQIMVKESKLEAAHRLFLESSYGWEVKSRVRSLNLLMDVLCQHNRSDVALQVFQEMNYQ 180

Query: 700  GCYPNRDSYAILMKGLCQDKRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCDNGK 879
            GCYP+RDSY I+M GLC+D RL+EATHLLYSMFWRISQKG+GEDIV+YR  LDALCD G 
Sbjct: 181  GCYPDRDSYRIVMMGLCKDGRLNEATHLLYSMFWRISQKGSGEDIVIYRIFLDALCDIGM 240

Query: 880  FEEAMEILGKILRKGLKAPKRCYNQLDLGHCSDGKDIEGAKRLIHDALVRGSVPSLVSYN 1059
             E+A+E+LGKILRKGLKAPKRC+ +LDL +C+   +IE  K LI++AL+RG++PSL SY 
Sbjct: 241  VEQALEVLGKILRKGLKAPKRCHPRLDLSNCNSDGNIETTKHLINEALIRGAIPSLSSYT 300

Query: 1060 AMAVDLYSEGKIGEADEVIVE 1122
            AMAVD Y+EGK+ +AD+V+ E
Sbjct: 301  AMAVDFYAEGKLSQADKVLDE 321



 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 47/150 (31%), Positives = 68/150 (45%), Gaps = 1/150 (0%)
 Frame = +1

Query: 637  ALCQKSRSDLALQIFQ-EMDYQGCYPNRDSYAILMKGLCQDKRLHEATHLLYSMFWRISQ 813
            ALC++ +   A+ + + EM    C PN   Y IL+KGLC  +    A   L  M  +   
Sbjct: 340  ALCKEGKVHEAINVLEVEMVEGNCVPNVRLYNILLKGLCDARNSATAVKYLKRMAKQTGC 399

Query: 814  KGNGEDIVVYRTLLDALCDNGKFEEAMEILGKILRKGLKAPKRCYNQLDLGHCSDGKDIE 993
              N E    Y  L+  LC +G F EA  IL ++L K    P   +N L  G CS G+  E
Sbjct: 400  VANKE---TYCILVHGLCQDGGFIEASRILEEMLIKSYWPPVDTFNMLIRGLCSIGRQYE 456

Query: 994  GAKRLIHDALVRGSVPSLVSYNAMAVDLYS 1083
             A   + + +     P L  +N++   L S
Sbjct: 457  -ATMWLEEMISLDEAPELSVWNSLVTCLCS 485



 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 49/213 (23%), Positives = 94/213 (44%), Gaps = 3/213 (1%)
 Frame = +1

Query: 244 HIFNEAKCR--YPKYSHNGPAYATMITILGTSGRITEMRGVIEQMREDSCECKDSVFVSA 417
           H+ NEA  R   P  S    +Y  M       G++++   V+++ ++         + + 
Sbjct: 282 HLINEALIRGAIPSLS----SYTAMAVDFYAEGKLSQADKVLDETQDRGFRPSLLTYEAK 337

Query: 418 IKTYAKAGLVDEAISLYK-NIPQFNCVNWTESFNTLLQIMVNENRLEAAHRLFVESSCGW 594
           +    K G V EAI++ +  + + NCV     +N LL+ + +      A +     +   
Sbjct: 338 VAALCKEGKVHEAINVLEVEMVEGNCVPNVRLYNILLKGLCDARNSATAVKYLKRMAKQT 397

Query: 595 QVKSRIQALNLLMYALCQKSRSDLALQIFQEMDYQGCYPNRDSYAILMKGLCQDKRLHEA 774
              +  +   +L++ LCQ      A +I +EM  +  +P  D++ +L++GLC   R +EA
Sbjct: 398 GCVANKETYCILVHGLCQDGGFIEASRILEEMLIKSYWPPVDTFNMLIRGLCSIGRQYEA 457

Query: 775 THLLYSMFWRISQKGNGEDIVVYRTLLDALCDN 873
           T  L  M           ++ V+ +L+  LC N
Sbjct: 458 TMWLEEMI----SLDEAPELSVWNSLVTCLCSN 486