BLASTX nr result
ID: Glycyrrhiza23_contig00014147
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00014147
(2172 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003622988.1| General transcription factor 3C polypeptide ... 863 0.0
ref|XP_003537671.1| PREDICTED: general transcription factor 3C p... 846 0.0
ref|XP_003622989.1| General transcription factor 3C polypeptide ... 704 0.0
ref|XP_002275875.1| PREDICTED: transcription factor tau subunit ... 592 e-166
ref|XP_004142476.1| PREDICTED: general transcription factor 3C p... 589 e-165
>ref|XP_003622988.1| General transcription factor 3C polypeptide [Medicago truncatula]
gi|355498003|gb|AES79206.1| General transcription factor
3C polypeptide [Medicago truncatula]
Length = 612
Score = 863 bits (2231), Expect = 0.0
Identities = 432/602 (71%), Positives = 482/602 (80%), Gaps = 44/602 (7%)
Frame = -1
Query: 1770 KSLMGVIKDGTISGVLPDAQGFLVHYPGYPSSISRAVDTLGGTQAILKARSSQSNRLELR 1591
K LMGVIKDGTISGVLP+ QGFLVHYPGYPS+ SRAVDTLGG+Q ILKARSSQ+N+LELR
Sbjct: 3 KKLMGVIKDGTISGVLPEPQGFLVHYPGYPSTTSRAVDTLGGSQGILKARSSQANKLELR 62
Query: 1590 FRPEDPYSHPAFGGLRPTNTLLLKISKRKLPNDHAAANANNSKCGMENGMQANQPEKEHG 1411
FRPEDPY HPAFG RPTN LLLKISKRKLP+D A +N S CGME+GMQA+ E EHG
Sbjct: 63 FRPEDPYCHPAFGERRPTNALLLKISKRKLPDDDGATTSN-SMCGMEHGMQADNVESEHG 121
Query: 1410 AAADRVDGEANLCADIVARVPEAYFFEGMADYQHVIPVHAEVSRRKKRNWSELEELRFAK 1231
AA D+VD EANLCADIV RVPEAYFFEGMADYQ+V+PVHA+V++RKKRNWSE EE AK
Sbjct: 122 AA-DKVDEEANLCADIVGRVPEAYFFEGMADYQYVVPVHADVAKRKKRNWSEPEETHLAK 180
Query: 1230 GGLMDVDHEDVMIIVPPIFAPKDVPENLVLRPPTTSSSKKKQEEIVQPHFEIDMEPVLAI 1051
GG +DVDHED+MIIVPPIFAPKD+PE+L+LRPPT SSSKKK+EEIV PHFEIDMEPVLA+
Sbjct: 181 GGRIDVDHEDIMIIVPPIFAPKDMPEDLLLRPPTVSSSKKKEEEIVHPHFEIDMEPVLAL 240
Query: 1050 DF------------------------DIKEIPKKVNWEEYIPEGSDQWESQMVVSRMFDE 943
DF + +IPKKVNWEEYIP+GS+QWESQM VSRMFDE
Sbjct: 241 DFFQIKDILKENISKHIALLWFSFDLAVLQIPKKVNWEEYIPQGSEQWESQMAVSRMFDE 300
Query: 942 RPIWSKDSLTERFLDKGLSFSHGMLRRLLSRISYYFSSGPFLRFWIKKGYDPRKDPDSR- 766
+PIWSK+SLTER LDKGLSFSHGM RRLLSRI+YYFSSGPF RFWIKKGYDPRKDP SR
Sbjct: 301 KPIWSKNSLTERLLDKGLSFSHGMFRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPGSRM 360
Query: 765 -----------IYQRIDYRVPVPLRSYCDTYSANKLKHRWEDICGFRAFPYKFQTSLQLF 619
+YQRIDYRVPVPLRS+CDTYSA+KLKH+W DIC FRAFPYKFQTSLQ
Sbjct: 361 IGTVPLVRKLLLYQRIDYRVPVPLRSFCDTYSADKLKHKWGDICAFRAFPYKFQTSLQFV 420
Query: 618 ELVDDYIQSEIKRPPLQATCTFESGWFSHQKINCFRQRLMVRYLAIFPKPGAENLLKAAT 439
EL+DDYIQSEI +PP+Q TCTFESGWFS KINC RQRLMVRYL+IFPKPGAE+LL+ A
Sbjct: 421 ELIDDYIQSEINKPPMQDTCTFESGWFSLNKINCLRQRLMVRYLSIFPKPGAESLLRVAA 480
Query: 438 SKFEKLKRECSRNATKLDGEECQQANSGLEENEEPDNAVDDEEETXXXXXXXXXXXXXXX 259
SKFEKLKREC+R A KL EE QQAN+GLEE+EEP+N DD+ E
Sbjct: 481 SKFEKLKRECNREAVKLCVEERQQANTGLEESEEPENVEDDDGEAAEANNSDEESEEELD 540
Query: 258 XAGDSEMPLPSPSYH--------NMENISRAHLQELFGSFPSNEIDGDKAQENGSDQEYH 103
GD+EMPLPSPS + + NIS HLQELFGSFPS+EIDGDKAQENGS++EYH
Sbjct: 541 LTGDTEMPLPSPSRYRTRHSTCLSYPNISMTHLQELFGSFPSDEIDGDKAQENGSEEEYH 600
Query: 102 IY 97
IY
Sbjct: 601 IY 602
>ref|XP_003537671.1| PREDICTED: general transcription factor 3C polypeptide 5-like
[Glycine max]
Length = 547
Score = 846 bits (2185), Expect = 0.0
Identities = 424/555 (76%), Positives = 457/555 (82%)
Frame = -1
Query: 1761 MGVIKDGTISGVLPDAQGFLVHYPGYPSSISRAVDTLGGTQAILKARSSQSNRLELRFRP 1582
MGVIKDGTISGVLP+ QGF+VHYP YPSSISRAVDTLGG QAI KAR S+SN+LELRFRP
Sbjct: 1 MGVIKDGTISGVLPEPQGFMVHYPAYPSSISRAVDTLGGIQAIQKARCSKSNKLELRFRP 60
Query: 1581 EDPYSHPAFGGLRPTNTLLLKISKRKLPNDHAAANANNSKCGMENGMQANQPEKEHGAAA 1402
EDPYSHPAFG LRPTN+LLLKISK K P A A++S NG Q
Sbjct: 61 EDPYSHPAFGELRPTNSLLLKISKTKPPPPVHDAEASSSST---NGEQ------------ 105
Query: 1401 DRVDGEANLCADIVARVPEAYFFEGMADYQHVIPVHAEVSRRKKRNWSELEELRFAKGGL 1222
D E +LCADIVAR PEAYFF GMADYQHVIPVHA+V+RRKKRNWSELEEL F KGG
Sbjct: 106 ---DQEGSLCADIVARFPEAYFFYGMADYQHVIPVHADVARRKKRNWSELEELHFDKGGF 162
Query: 1221 MDVDHEDVMIIVPPIFAPKDVPENLVLRPPTTSSSKKKQEEIVQPHFEIDMEPVLAIDFD 1042
MD+DHEDVMIIVPPIFAPKDVPENLVLRP T SSSKKK EE+VQPHFE+DMEPVLAIDFD
Sbjct: 163 MDLDHEDVMIIVPPIFAPKDVPENLVLRPATMSSSKKKPEEVVQPHFEMDMEPVLAIDFD 222
Query: 1041 IKEIPKKVNWEEYIPEGSDQWESQMVVSRMFDERPIWSKDSLTERFLDKGLSFSHGMLRR 862
IKEIPKKVNWEEYIP+GSDQWE QMVVSRMFDERPIWSK+SLTE LDKGLSFSH MLRR
Sbjct: 223 IKEIPKKVNWEEYIPQGSDQWELQMVVSRMFDERPIWSKNSLTELLLDKGLSFSHSMLRR 282
Query: 861 LLSRISYYFSSGPFLRFWIKKGYDPRKDPDSRIYQRIDYRVPVPLRSYCDTYSANKLKHR 682
LLSRISYYFSSGPFLRFWIKKGYDPRKDP+SRIYQRIDYRVPVPLRSYCD +SANK KHR
Sbjct: 283 LLSRISYYFSSGPFLRFWIKKGYDPRKDPNSRIYQRIDYRVPVPLRSYCDAHSANKSKHR 342
Query: 681 WEDICGFRAFPYKFQTSLQLFELVDDYIQSEIKRPPLQATCTFESGWFSHQKINCFRQRL 502
W+DIC FR FPYKFQTSLQ F+LVDDYIQSEI +PP + TCT +GWFS INC RQRL
Sbjct: 343 WKDICAFRVFPYKFQTSLQFFDLVDDYIQSEINKPPFRPTCTSGTGWFSQHMINCIRQRL 402
Query: 501 MVRYLAIFPKPGAENLLKAATSKFEKLKRECSRNATKLDGEECQQANSGLEENEEPDNAV 322
MVRYL++FPKPGAENLL+AAT KFEKLKREC R+A KLDGEECQQAN GLEENEE DN
Sbjct: 403 MVRYLSVFPKPGAENLLRAATLKFEKLKRECYRHAMKLDGEECQQANLGLEENEELDNG- 461
Query: 321 DDEEETXXXXXXXXXXXXXXXXAGDSEMPLPSPSYHNMENISRAHLQELFGSFPSNEIDG 142
+DEEE AGD+EMPLPS SY N EN+SR HLQ+LF +FP NEID
Sbjct: 462 EDEEEAAEGNDSDEEWEEEHDLAGDNEMPLPSDSYINFENLSRTHLQDLFVNFPPNEIDC 521
Query: 141 DKAQENGSDQEYHIY 97
D Q NGS++EY IY
Sbjct: 522 DNVQANGSEEEYQIY 536
>ref|XP_003622989.1| General transcription factor 3C polypeptide [Medicago truncatula]
gi|355498004|gb|AES79207.1| General transcription factor
3C polypeptide [Medicago truncatula]
Length = 509
Score = 704 bits (1817), Expect = 0.0
Identities = 350/499 (70%), Positives = 393/499 (78%), Gaps = 44/499 (8%)
Frame = -1
Query: 1461 CGMENGMQANQPEKEHGAAADRVDGEANLCADIVARVPEAYFFEGMADYQHVIPVHAEVS 1282
CGME+GMQA+ E EHGAA D+VD EANLCADIV RVPEAYFFEGMADYQ+V+PVHA+V+
Sbjct: 2 CGMEHGMQADNVESEHGAA-DKVDEEANLCADIVGRVPEAYFFEGMADYQYVVPVHADVA 60
Query: 1281 RRKKRNWSELEELRFAKGGLMDVDHEDVMIIVPPIFAPKDVPENLVLRPPTTSSSKKKQE 1102
+RKKRNWSE EE AKGG +DVDHED+MIIVPPIFAPKD+PE+L+LRPPT SSSKKK+E
Sbjct: 61 KRKKRNWSEPEETHLAKGGRIDVDHEDIMIIVPPIFAPKDMPEDLLLRPPTVSSSKKKEE 120
Query: 1101 EIVQPHFEIDMEPVLAIDF------------------------DIKEIPKKVNWEEYIPE 994
EIV PHFEIDMEPVLA+DF + +IPKKVNWEEYIP+
Sbjct: 121 EIVHPHFEIDMEPVLALDFFQIKDILKENISKHIALLWFSFDLAVLQIPKKVNWEEYIPQ 180
Query: 993 GSDQWESQMVVSRMFDERPIWSKDSLTERFLDKGLSFSHGMLRRLLSRISYYFSSGPFLR 814
GS+QWESQM VSRMFDE+PIWSK+SLTER LDKGLSFSHGM RRLLSRI+YYFSSGPF R
Sbjct: 181 GSEQWESQMAVSRMFDEKPIWSKNSLTERLLDKGLSFSHGMFRRLLSRIAYYFSSGPFQR 240
Query: 813 FWIKKGYDPRKDPDSR------------IYQRIDYRVPVPLRSYCDTYSANKLKHRWEDI 670
FWIKKGYDPRKDP SR +YQRIDYRVPVPLRS+CDTYSA+KLKH+W DI
Sbjct: 241 FWIKKGYDPRKDPGSRMIGTVPLVRKLLLYQRIDYRVPVPLRSFCDTYSADKLKHKWGDI 300
Query: 669 CGFRAFPYKFQTSLQLFELVDDYIQSEIKRPPLQATCTFESGWFSHQKINCFRQRLMVRY 490
C FRAFPYKFQTSLQ EL+DDYIQSEI +PP+Q TCTFESGWFS KINC RQRLMVRY
Sbjct: 301 CAFRAFPYKFQTSLQFVELIDDYIQSEINKPPMQDTCTFESGWFSLNKINCLRQRLMVRY 360
Query: 489 LAIFPKPGAENLLKAATSKFEKLKRECSRNATKLDGEECQQANSGLEENEEPDNAVDDEE 310
L+IFPKPGAE+LL+ A SKFEKLKREC+R A KL EE QQAN+GLEE+EEP+N DD+
Sbjct: 361 LSIFPKPGAESLLRVAASKFEKLKRECNREAVKLCVEERQQANTGLEESEEPENVEDDDG 420
Query: 309 ETXXXXXXXXXXXXXXXXAGDSEMPLPSPSYH--------NMENISRAHLQELFGSFPSN 154
E GD+EMPLPSPS + + NIS HLQELFGSFPS+
Sbjct: 421 EAAEANNSDEESEEELDLTGDTEMPLPSPSRYRTRHSTCLSYPNISMTHLQELFGSFPSD 480
Query: 153 EIDGDKAQENGSDQEYHIY 97
EIDGDKAQENGS++EYHIY
Sbjct: 481 EIDGDKAQENGSEEEYHIY 499
>ref|XP_002275875.1| PREDICTED: transcription factor tau subunit sfc1-like [Vitis
vinifera]
Length = 568
Score = 592 bits (1527), Expect = e-166
Identities = 314/577 (54%), Positives = 391/577 (67%), Gaps = 22/577 (3%)
Frame = -1
Query: 1761 MGVIKDGTISGVLPDAQGFLVHYPGYPSSISRAVDTLGGTQAILKARSSQSNRLELRFRP 1582
MGVI++G+ISG +P + F VHYP YPSS +RA++TLGGTQAI KARSSQSN+LEL FRP
Sbjct: 1 MGVIEEGSISGYIPSNEAFSVHYPAYPSSTARAIETLGGTQAIRKARSSQSNKLELHFRP 60
Query: 1581 EDPYSHPAFGGLRPTNTLLLKISKRKLPNDHAAANANNSKCGMENGMQANQPEKEHGAAA 1402
EDPYSHPAFG L+P N LLL+ISK+K + + + A + +
Sbjct: 61 EDPYSHPAFGELQPCNNLLLRISKKKSTDGQSESVATGEEVEAQ---------------- 104
Query: 1401 DRVDGEA--NLCADIVARVPEAYFFEGMADYQHVIPVHAEVSRRKKRNWSELEELRFAKG 1228
+ GE LCADI+ARV EAY F GM DYQHV+PVHA+V+RRKKRNW+E+E KG
Sbjct: 105 --ISGEVPIRLCADIIARVSEAYHFNGMVDYQHVLPVHADVARRKKRNWAEVEP-HLEKG 161
Query: 1227 GLMDVDHEDVMIIVPPIFAPKDVPENLVLRPPTTSSSKKKQEEIVQPHFEIDMEPVLAID 1048
L+DVD ED+MI++PP+F+PKDVPE LVLRP T + KKKQE +VQ +E+ +EP LAID
Sbjct: 162 DLVDVDQEDLMILLPPLFSPKDVPEKLVLRPSMTLNLKKKQEGVVQQRWEMGIEPCLAID 221
Query: 1047 FDIKEIPKKVNWEEYIPEGSDQWESQMVVSRMFDERPIWSKDSLTERFLDKGLSFSHGML 868
F+IKEIPKKVNWE+YIP+GS+QWE QM VS +FDERPIW K +LTER LDKGL+ L
Sbjct: 222 FEIKEIPKKVNWEQYIPKGSEQWEWQMAVSNLFDERPIWPKGALTERLLDKGLNVGDYTL 281
Query: 867 RRLLSRISYYFSSGPFLRFWIKKGYDPRKDPDSRIYQRIDYRVPVPLRSYCDTYSANKLK 688
RRLL R +YYFS+GPFLRFWI+KGYDPRK+PDS IYQRID+RVP LRSYCD +AN LK
Sbjct: 282 RRLLFRTAYYFSNGPFLRFWIRKGYDPRKNPDSCIYQRIDFRVPPSLRSYCDANAANGLK 341
Query: 687 HRWEDICGFRAFPYKFQTSLQLFELVDDYIQSEIKRPPLQATCTFESGWFSHQKINCFRQ 508
RWEDIC FR FPYK TSLQLFEL DDYIQ EI++P Q TCT +GWFS++ + R
Sbjct: 342 QRWEDICSFRVFPYKCHTSLQLFELADDYIQQEIRKPLKQTTCTGATGWFSYRVLESLRL 401
Query: 507 RLMVRYLAIFPKPGAENLLKAATSKFEKLKR-ECSRNATKLDGEECQQANSGLE---ENE 340
+MVR+L+I P+ AE LLK+A+ +FEK KR N + + E Q+ N LE + E
Sbjct: 402 CVMVRFLSICPETSAEYLLKSASDRFEKSKRMHIYENNLRPNEEGIQEVNKELEGDKDKE 461
Query: 339 EPDNAVDDEEETXXXXXXXXXXXXXXXXAGDSEMPLPSPSYHNM---------------E 205
EP++ DDEE+ +M + S + + E
Sbjct: 462 EPNDVDDDEEDEMEAENGEEELDAYEAL----DMKIVERSVNTLRSSFGFSIYILDLDAE 517
Query: 204 NISRAHLQELFGSFPSNEIDGDKAQE-NGSDQEYHIY 97
NISR +LQ LFGSF + G + Q+ + SD EY IY
Sbjct: 518 NISRDYLQGLFGSFSFTKAGGGEVQDADTSDGEYQIY 554
>ref|XP_004142476.1| PREDICTED: general transcription factor 3C polypeptide 5-like
[Cucumis sativus]
Length = 556
Score = 589 bits (1518), Expect = e-165
Identities = 303/565 (53%), Positives = 392/565 (69%), Gaps = 10/565 (1%)
Frame = -1
Query: 1761 MGVIKDGTISGVLPDAQGFLVHYPGYPSSISRAVDTLGGTQAILKARSSQSNRLELRFRP 1582
MG +KD TISG LP AQ F VHYP YPSS +A+++LGGTQ+ILK R QSN+LELRFRP
Sbjct: 1 MGKLKDNTISGFLPTAQNFAVHYPSYPSSKHQAIESLGGTQSILKVRGLQSNKLELRFRP 60
Query: 1581 EDPYSHPAFGGLRPTNTLLLKISKRKLPNDHAAANANNSKCGMENGMQANQPEKEHGAAA 1402
DPYSHP +G LRP + LLKI H+ ++ N E M+ + E
Sbjct: 61 ADPYSHPTYGELRPCSGFLLKIC-------HSKSDTN------EGIMKVEEVPGED---- 103
Query: 1401 DRVDGEANLCADIVARVPEAYFFEGMADYQHVIPVHAEVSRRKKRNWSELEELRFAKGGL 1222
E NL ++VARVPEAY FEGM DYQHV+ VHA+ ++RKK NW+E+ E R K
Sbjct: 104 -----EVNLDFEMVARVPEAYHFEGMVDYQHVVAVHADATQRKKGNWAEMHEPRLGKSNA 158
Query: 1221 MDVDHEDVMIIVPPIFAPKDVPENLVLRPPTTSSSKKKQEEIVQPH---FEIDMEPVLAI 1051
+DVD ED MI+VPP+F+ KDVPENLVL+ P +KK E + P E+D+EPVLAI
Sbjct: 159 IDVDKEDTMILVPPLFSIKDVPENLVLKTPAIYIPRKKSETVQNPCEVICEVDIEPVLAI 218
Query: 1050 DFDIKEIPKKVNWEEYIPEGSDQWESQMVVSRMFDERPIWSKDSLTERFLDKGLSFSHGM 871
DF+IK+IPK V WE+Y+P+GSD+W+ Q+ VS++F+ERPIW KDSL +R LD GL+FSHG+
Sbjct: 219 DFNIKDIPKTVIWEKYVPQGSDEWDYQVAVSKLFEERPIWPKDSLVQRMLDMGLAFSHGV 278
Query: 870 LRRLLSRISYYFSSGPFLRFWIKKGYDPRKDPDSRIYQRIDYRVPVPLRSYCDTYSANKL 691
LRRLLSRI+YYFSSGPF RFWIKKGYDPRKD +S+IYQRID+RVPV LRSYC++ ++N+L
Sbjct: 279 LRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDRNSKIYQRIDFRVPVSLRSYCNSNASNEL 338
Query: 690 KHRWEDICGFRAFPYKFQTSLQLFELVDDYIQSEIKRPPLQATCTFESGWFSHQKINCFR 511
+ I F+ FP KFQTSLQLFEL D+YIQ EI++P +A C++ESGWFS + +NC R
Sbjct: 339 CYGHAGISAFQVFPRKFQTSLQLFELQDEYIQEEIRKPSEEALCSYESGWFSLRILNCIR 398
Query: 510 QRLMVRYLAIFPKPGAENLLKAATSKFEKLKRECSRNATKLDGEECQQANSGLEENEEPD 331
QR+M+R+L++FP GAE LL AA+ FEKLKR ++ +K+D EE +AN+ +++ D
Sbjct: 399 QRIMMRFLSVFPTAGAEALLTAASESFEKLKRGDRKDCSKVDQEEEHEANAVANHDDKLD 458
Query: 330 NAVDDEEE-----TXXXXXXXXXXXXXXXXAGDSEMPLPSPSYHNMENISRAHLQELFGS 166
+ +E+E D E L S SY ME++SR HLQELFGS
Sbjct: 459 ASYAEEDEEDGIGVESGNEALDAYDDFNMVGDDDEFSLHSHSYLGMEDVSRTHLQELFGS 518
Query: 165 FPSNEIDGDKAQE--NGSDQEYHIY 97
FPS + DG+K + +GSD+EY IY
Sbjct: 519 FPSLDEDGEKMMDDGDGSDEEYQIY 543