BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014145
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590454.1| RNA polymerase sigma factor [Medicago trunca...   116   2e-24
gb|AFK38759.1| unknown [Lotus japonicus]                              108   4e-22
ref|XP_003536999.1| PREDICTED: RNA polymerase sigma factor rpoD-...   107   1e-21
ref|XP_003625673.1| RNA polymerase sigma factor rpoD [Medicago t...   106   2e-21
ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD ...   104   6e-21

>ref|XP_003590454.1| RNA polymerase sigma factor [Medicago truncatula]
           gi|355479502|gb|AES60705.1| RNA polymerase sigma factor
           [Medicago truncatula]
          Length = 567

 Score =  116 bits (291), Expect = 2e-24
 Identities = 53/68 (77%), Positives = 63/68 (92%)
 Frame = -2

Query: 205 AGLNCQALQTQLRCGNRSREKLVQANLRLVHHVAKNYQGLGLSLEDLLQEGSMGLLKSVK 26
           AGLNC+ ++ QLRCGNRSREKL+QANLRLVH++AK+YQG GLS+EDLLQEGS GL+KS+K
Sbjct: 310 AGLNCRKMKAQLRCGNRSREKLIQANLRLVHYIAKSYQGRGLSIEDLLQEGSTGLIKSIK 369

Query: 25  KFKPQAGC 2
           KFK QAGC
Sbjct: 370 KFKTQAGC 377


>gb|AFK38759.1| unknown [Lotus japonicus]
          Length = 311

 Score =  108 bits (270), Expect = 4e-22
 Identities = 52/67 (77%), Positives = 59/67 (88%)
 Frame = -2

Query: 202 GLNCQALQTQLRCGNRSREKLVQANLRLVHHVAKNYQGLGLSLEDLLQEGSMGLLKSVKK 23
           GL+C ALQTQLR G RS+EKL+ ANLR+V HVAKNY G GLS +DLLQEGSMGL+KSV+K
Sbjct: 55  GLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEK 114

Query: 22  FKPQAGC 2
           FKPQAGC
Sbjct: 115 FKPQAGC 121


>ref|XP_003536999.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Glycine max]
          Length = 571

 Score =  107 bits (266), Expect = 1e-21
 Identities = 52/67 (77%), Positives = 60/67 (89%)
 Frame = -2

Query: 205 AGLNCQALQTQLRCGNRSREKLVQANLRLVHHVAKNYQGLGLSLEDLLQEGSMGLLKSVK 26
           AGLNC+ LQ+QL  GNRSREKL+QANLR+V HVAK+YQG GLSL+DLLQEGSMGL+KSV+
Sbjct: 314 AGLNCRLLQSQLHSGNRSREKLIQANLRMVVHVAKSYQGRGLSLQDLLQEGSMGLMKSVE 373

Query: 25  KFKPQAG 5
           KF P AG
Sbjct: 374 KFNPLAG 380


>ref|XP_003625673.1| RNA polymerase sigma factor rpoD [Medicago truncatula]
           gi|355500688|gb|AES81891.1| RNA polymerase sigma factor
           rpoD [Medicago truncatula]
          Length = 557

 Score =  106 bits (265), Expect = 2e-21
 Identities = 49/67 (73%), Positives = 60/67 (89%)
 Frame = -2

Query: 202 GLNCQALQTQLRCGNRSREKLVQANLRLVHHVAKNYQGLGLSLEDLLQEGSMGLLKSVKK 23
           GL+C+ LQ +L CGNRS++KL+ ANLRLV H+AK YQG GLSL+DLLQEGSMGL++SV+K
Sbjct: 301 GLSCRDLQKRLHCGNRSKDKLIHANLRLVVHIAKYYQGRGLSLQDLLQEGSMGLMRSVEK 360

Query: 22  FKPQAGC 2
           FKPQAGC
Sbjct: 361 FKPQAGC 367


>ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
          Length = 572

 Score =  104 bits (260), Expect = 6e-21
 Identities = 48/69 (69%), Positives = 59/69 (85%)
 Frame = -2

Query: 208 SAGLNCQALQTQLRCGNRSREKLVQANLRLVHHVAKNYQGLGLSLEDLLQEGSMGLLKSV 29
           + GL+CQ LQ+QL  GNRSR+KL+ ANLR+V H+AK YQG GL+L+DLLQEGSMGL+ SV
Sbjct: 314 AVGLSCQVLQSQLHSGNRSRQKLIYANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMNSV 373

Query: 28  KKFKPQAGC 2
           +KFKP AGC
Sbjct: 374 EKFKPNAGC 382